Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
792,780 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 792,780 | 0 | G | C | 98.5%
| 597.8
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/4); new base C (135/122); total (135/127) |
| Fisher's exact test for biased strand distribution p-value = 5.30e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 792,781 | 0 | C | G | 99.6%
| 604.4
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (134/126); total (135/127) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 792,782 | 0 | T | A | 99.6%
| 618.1
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (135/126); minor base G (0/1); total (135/127) |
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 262 total aligned reads displayed.
TCGCTGGCATCAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCAACTTTCTGGACTTAAATCGCGTAATTCTATCCCGTTGATTCGTAGGCTTCCCTGATAACTGAGAAAACCAGAAAGCGCGTTCAGCAGACTGCTTTTACCACTACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGGCTCGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑GCTTGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGCCGAGATAGGAAAAACCAAAGTAGAC > CP042583/792502‑793061
|||
tCGCTGGCAGCAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATa < 1:1532135/288‑1 (MQ=255)
tGGCATCAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTACGCAGTGAGCTTTTACCTGACCCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGAAAAGTAAAGTTCACCGGCCCGGCCAGCGTTTTACC‑TTCCGCCGAAGTGATAAACa > 2:1532135/1‑288 (MQ=255)
tCAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCCGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGctcct < 2:348420/289‑1 (MQ=255)
cAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGctcctc < 1:435909/289‑1 (MQ=255)
aaGGTCGCGCCGGTAGTACGTTATCCCGCAATGTTGCTGCAGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGctcctc < 2:1484658/288‑1 (MQ=255)
gcCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTCTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCa < 1:136646/288‑1 (MQ=255)
ccAGTAGTACGTGATCCCGTGATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCaa < 1:1787663/288‑1 (MQ=255)
tagtaCGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTc < 2:727373/289‑1 (MQ=255)
cGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCgg > 2:294220/1‑289 (MQ=255)
ttttCCCGCAAGTTTGCTCCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGGGATGTTTACGCCATGAGTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAGCCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGAt < 2:744974/286‑1 (MQ=255)
ttATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGa > 1:1907974/1‑288 (MQ=255)
ttATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTACGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGa > 1:1046411/1‑288 (MQ=255)
tCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCgg > 1:1021947/1‑289 (MQ=255)
tCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCgg > 1:23668/1‑289 (MQ=255)
tCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGCCACCGGATCgg > 1:1229701/1‑289 (MQ=255)
ccGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCATGAGAGATGTTTACGCCATGATTCTGGTGATAAATGGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCAACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGtc < 1:1896362/289‑2 (MQ=255)
cAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGagaggacgat > 1:1064977/1‑280 (MQ=255)
aaTGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCCCCTCGGCCTCAATGGTCCCCGGATCgggcgat > 2:1760335/1‑283 (MQ=255)
tgGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGCCCTCCATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCCCCACGt > 2:545660/1‑289 (MQ=255)
cccAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAg > 2:1692379/1‑289 (MQ=255)
cccAGGAGAGATGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGACAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCCGG‑CGGTGCTAACTCCACCTCCCCACCTTCCGGAGTGGCggg > 2:1289507/1‑287 (MQ=255)
gagagaTGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGC‑CGATGCTAATTCCGCCTCACCACGTTGCGGAGGGGCGAGCgggg > 2:1713694/1‑289 (MQ=255)
ttgtgTACGCCATGATTCTGGTGATAAATCGCGTAATACTATCCCGTTGAGTCGTAGCGATCCCTGATATGAGATAAAACCAGAACGCGCGTTCAGCAGTGAGCTTTTACCTGAACCTCGGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAACTAAAGCTGAGCGGTCCGGCCAACGTTTTCCC‑TTCCGGCGACGTGATAAACAGTGTCTCGGCCTCAATGGCCACCGGATCGCT‑CGATGCTAATTACTCCTCACTACCCGACGTATGGGCGAgatggtttcc > 2:1359866/2‑279 (MQ=255)
aTGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGCTCGGC‑CGATGCTAATTCCGCCTCACCCCGTTGCGGATGGGCGAGCGGGGTTT‑cc > 2:338271/1‑289 (MQ=255)
aTGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑cc > 1:25594/1‑289 (MQ=255)
aTGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑cc > 1:490434/1‑289 (MQ=255)
aTGTTTACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGG‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑cc > 1:1880123/1‑289 (MQ=255)
tACGCCATGATTCTGGTGATAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGtc > 2:1945610/1‑235 (MQ=255)
tgattctggtgatAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGCTTTAGC‑TTCCTGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCCCGTTGCGGTTGGGCCAGCGGGGTGT‑CCATAAACGtttg > 1:64602/13‑287 (MQ=255)
tAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCGACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCa > 1:1838669/1‑286 (MQ=255)
tAAATCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCa > 2:905040/1‑286 (MQ=255)
aaaTCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTg < 1:938723/289‑1 (MQ=255)
aaaTCGCGTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTg < 1:1087067/289‑1 (MQ=255)
gcgTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCa < 1:358452/289‑1 (MQ=255)
gcgTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATAGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCa > 2:852471/1‑289 (MQ=255)
cgTAATTCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTACGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTCCGGATGGGCGCGCGGGGTTT‑CCACAAACGTTTCCGGACTGTCAGCCGCCCCa > 2:617996/1‑288 (MQ=255)
gTAATTCTATGCCGTGGATGCGTAGAGATCCGTGCTAGGAGAGAAAACCGGAAAGCGCGCTCAGCAGTGAGCTTTTACCTGAACCGCCTCGACCAACCAACCCCGCGCGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCaa < 2:1035400/288‑1 (MQ=255)
tCTATCCCGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCt < 1:568322/289‑1 (MQ=255)
cGTTGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGtt > 1:870329/1‑242 (MQ=255)
ttGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCt > 2:125761/1‑175 (MQ=255)
ttGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGTCTAGCGGGGTTT‑CCATAACCGTTTTCATACGTTACGCTGCGCCAACAGCCGGGGCATTAg > 2:1053977/1‑289 (MQ=255)
ttGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCaa > 1:757648/1‑274 (MQ=255)
ttGATTCGTAGCGATCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTGTa > 1:1812726/1‑288 (MQ=255)
agcgatCCCTGATATGAGAAAAAACCAGAAAGCGCATTCCGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATaa < 2:1424378/283‑1 (MQ=255)
atCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGt > 1:543680/2‑289 (MQ=255)
atCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGt > 2:879506/2‑289 (MQ=255)
atCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTCTACC‑TTCCCGCGACGTGATAAACAGCTCCTCGGCCTCAGTCGTCACGGGATCGGTCGCTT‑CGAATTCCGCCTCACCACGTTGCGGATGGGCAAGCGGGGGTA‑CCATCAACATCTTCCGACTGTCAGCTTCGCCAACAACCGGCGCTTGAGCAGGAttagactt > 2:79528/2‑282 (MQ=255)
atCCCTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTACGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCTCCTCACCACGTTGCGGATGGGCGAGAGGGGTTT‑CCAAACACGTTTGCAGACTGTCAGCTGCGCAAACGGCCCGGTCTTTAACATGGTAAACCGt > 2:1028445/2‑289 (MQ=255)
cccTGATAGGGGAGAAACCCAGAAAGCGCGTTAGGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTAc < 2:1833155/289‑1 (MQ=255)
ccTGATATGAGAGAAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCATCTGCGCCAACAGcc > 2:1080994/1‑263 (MQ=255)
gagagaAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATcgc > 1:339587/3‑289 (MQ=255)
agagaAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATcgcg > 1:859313/2‑289 (MQ=255)
gaAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTa < 1:1551671/288‑1 (MQ=255)
gaAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTa < 1:905040/288‑1 (MQ=255)
gaAAACCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTa < 1:356576/288‑1 (MQ=255)
aaaCCAGAAAGCGCGTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATg > 2:988193/1‑289 (MQ=255)
cgcgTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGCCTTTCAGCTGCGCCAACAGCCCGGGCTTTAGCCTGATAAAACGTACCAAGCTCGCGTTATGGCTGGcaaaa > 2:1678015/1‑288 (MQ=255)
gTTCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCCACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGACCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAAc > 1:1462069/1‑286 (MQ=255)
tCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTg < 1:1692379/288‑1 (MQ=255)
tCAGCAGTGAGCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTg < 1:294220/288‑1 (MQ=255)
agtgagCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGgcgc < 1:1760335/282‑1 (MQ=255)
agtgagCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGgcg < 2:1806958/281‑1 (MQ=255)
agtgagCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCa < 1:1033000/283‑1 (MQ=255)
tcttgtacctgacccGCTGCGACCAACCCACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCCGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATc < 1:1587949/276‑1 (MQ=255)
gcgtttaccggaaCCGCGGGGACCAACCAACACCGCACGTGGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGAt < 2:1383162/276‑1 (MQ=255)
gCTTTTACCTGAACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGAt < 2:502323/288‑1 (MQ=255)
gaaCCGCTGCGAGCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGaa < 1:332552/287‑1 (MQ=255)
aaCCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCCGGAAAAACCCTGGCGCAAGGACCAGGGCCAGaaa > 2:1625377/2‑289 (MQ=255)
aCCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCaa < 1:1000767/206‑1 (MQ=255)
aCCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCaa > 2:1000767/1‑206 (MQ=255)
cTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATg < 2:419749/108‑1 (MQ=255)
cTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAAccc > 1:1328953/1‑288 (MQ=255)
cTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGCCTTTGGCAGGATAAACCTAACCGGGTTCGCGAATGGGCGGGAAAAACTATGCCGAAAGGATCAGGGCAAGAAAAccc > 1:775181/1‑288 (MQ=255)
cTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGG‑CGATGCTAATTCCGCCTCACCACGCTGCGGATGGGCGCGCCGGGTTT‑CCATAAACGTTTTCAGACTGTCCACTGCACCAACAGCCTGGGCTTTAGCCTGATAAAACGTACCGAGATCCCGCAATGGCACGAAAAATCCGTGCACCACGCACAGGGACAGAAAAccc > 2:1013400/1‑288 (MQ=255)
gACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGATGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGcagc < 1:83734/289‑1 (MQ=255)
accaaccaACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGcagcc > 1:730840/1‑289 (MQ=255)
aacACCGCACGTTGGCCTGCTGGCAAAGGAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTca < 2:1233731/289‑1 (MQ=255)
cccgccagtgtgCCGGCTGGGAAAGTAAAGTCAAGGGGTCCGGCCGGCGTTTTACC‑TTCCGGGGAGGTGATAAACAGCTCCGCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac < 2:23668/278‑1 (MQ=255)
acCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac < 2:1067598/289‑1 (MQ=255)
ccGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCGGCTGAGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCTCGTAATGGCTGGAAAAACTACGGCGCAAGGAACAGGGCCAGAAAACCCCGAGCCAGCAGCACAcc > 2:1268212/1‑289 (MQ=255)
ccGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACAcc > 1:1439453/1‑289 (MQ=255)
cACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAg > 1:1250786/1‑198 (MQ=255)
cACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCACGGATCAGGGGCAGACAACCCGCAGCCATCGTCACACCGGt > 2:277305/1‑289 (MQ=255)
aCGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTa < 1:1950227/289‑1 (MQ=255)
tGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGt > 1:657683/1‑289 (MQ=255)
tGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGAGCCACACCGGTATCGt > 1:1495981/1‑289 (MQ=255)
cccgttcgccaatgaaagtTCAGCCGTCCGGGTCGCGTTTTACCGTTCGGCGGGAGTCTAAAACAGCT‑CTGGGCCTCAAAGGGTAACGGGACGGG‑GGATGCCAAATCCGCCTCCACCCGGTGCGGATGGGGGGGGGGGGTTTCCCATAACGGTTTTC‑GGCTGTCAGGCGCGCCAACCGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGt < 2:775181/275‑1 (MQ=255)
ccTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTAGCGCAGt > 1:1151934/1‑289 (MQ=255)
ctgctgACAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGt < 1:1289507/288‑1 (MQ=255)
ctgGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGAcc > 1:1399737/1‑289 (MQ=255)
caagtCCAGCGGCCCGGCAAGCTTTTTACC‑TTCCGGGGACGGTATAAACAGCACCTCGGCCTAAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAg < 2:358040/287‑1 (MQ=255)
ttCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAAGGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGc < 2:1326744/289‑1 (MQ=255)
tCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGc < 1:1678015/288‑1 (MQ=255)
cGGTCCGGCCAGCGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGaa < 1:593776/233‑1 (MQ=255)
cGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac < 1:1620773/242‑1 (MQ=255)
cGTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac > 2:1620773/1‑242 (MQ=255)
gTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac < 1:1190527/241‑1 (MQ=255)
gTTTTACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCacac > 2:1190527/1‑241 (MQ=255)
tttACC‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGCCGAGATAGGAAAAACCAAAg < 1:988193/289‑1 (MQ=255)
ttccc‑TTCCGGCGACGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑CGATGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGCCGAGATAGGAAAAACCAAAGt < 1:467812/286‑1 (MQ=255)
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TCGCTGGCATCAGGTCGCGCCAGTAGTACGTTATCCCGCAATGTTGCTGCCGGTAATTGTGGGTTTTGCCCAACCCAGGAGAGATGTTTACGCCAACTTTCTGGACTTAAATCGCGTAATTCTATCCCGTTGATTCGTAGGCTTCCCTGATAACTGAGAAAACCAGAAAGCGCGTTCAGCAGACTGCTTTTACCACTACCGCTGCGACCAACCAACACCGCACGTTGGCCTGCTGGCAAAGTAAAGTTCAGCGGTCCGGCCAGCGTTTTACC‑TTCCGGGCTCGTGATAAACAGCTCCTCGGCCTCAATGGTCACCGGATCGGT‑GCTTGCTAATTCCGCCTCACCACGTTGCGGATGGGCGAGCGGGGTTT‑CCATAAACGTTTTCAGACTGTCAGCTGCGCCAACAGCCTGGGCTTTAGCATGATAAAACGTACCGAGATCGCGTAATGGCTGGAAAAACTCTGGCGCAAGGATCAGGGCCAGAAAACCCGCAGCCAGCGTCACACCGGTATCGTAGTGACCAAAATCCAGCTCGCCGAGATAGGAAAAACCAAAGTAGAC > CP042583/792502‑793061
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
