Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
808,002 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 808,002 | 0 | G | C | 99.6%
| 646.6
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (146/125); minor base A (1/0); total (147/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 808,003 | 0 | C | G | 100.0%
| 638.4
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (147/125); total (147/125) |
| * | CP042583 | 808,004 | 0 | T | A | 99.6%
| 640.2
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (146/124); minor base G (1/0); total (147/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 272 total aligned reads displayed.
GGGAATTAATCGGTCGCGGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGGCTCAAGCGAT‑CCCATGCGCTATGCCGGGTAATTTCATTAAAGGTCCCACTCGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCACTAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGACCGGTTTCAAAACTGGTGGT > CP042583/807723‑808283
|||
cgcgGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTaaa < 2:424392/289‑1 (MQ=255)
cgcgGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTaa < 2:695795/288‑1 (MQ=255)
ttCTATGGTTTGCATATGACCGGGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTccctga < 1:1435353/289‑4 (MQ=255)
aTGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTGCTTAAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCAATGCCGAATGCCGGGTAATTTCATTAAAGGTccctgcagcg > 1:843849/1‑282 (MQ=255)
ttGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCgtcagt < 1:343748/289‑1 (MQ=255)
tGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCgtcagtc > 1:557702/1‑289 (MQ=255)
tGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCAATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGATCCCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCgtcag > 1:244347/1‑288 (MQ=255)
tGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACACCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGGATGCCGGGTAATTTCATTAAAGGTCCCTGACCCgtcagt > 1:1344274/1‑288 (MQ=255)
tGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGAc > 2:1369329/1‑288 (MQ=255)
tGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTCCGCACCAGCTTTCGAACAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTAACGCCACAGGCACCACAAAAACg > 2:839000/1‑289 (MQ=255)
ggggATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACGCCCGAACCCTGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCCTTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACg > 2:91615/1‑289 (MQ=255)
gggATGGCCGTAGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑t < 1:523569/288‑1 (MQ=255)
gATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCa < 1:391637/288‑1 (MQ=255)
ggCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAACGGTCCCTGACTGCTCAGCCACGACAAAGCCG‑TCCAAc > 2:1196147/1‑288 (MQ=255)
aacaacCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGctgaaagc < 1:59883/289‑8 (MQ=255)
aaacCGGGTGTTCGGCACCGGTGTCCTTTTATTTCTCGTCCGTTAACGGGTCATAACTGGTCAACAAATTACGTTAAGAAGGAAGGTGGTTAGAGAACAACGTCGCCAGTACTTCAATATCATTACGCCAGTCGAGATGCAGCTCGCACGCCACG‑CCGAAACATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAAGGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCCATGGCTGAAAgcgc < 2:1284610/288‑1 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAAt < 2:1064153/217‑1 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAAt > 1:1064153/1‑217 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTTACGCGTCAGTCACGACAAAGACG‑TCa > 1:1841769/1‑260 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCa < 2:1841769/260‑1 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGctgaaagc < 2:214513/284‑8 (MQ=255)
ccGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCgg > 2:1948600/1‑289 (MQ=255)
gggTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGaa > 1:441413/1‑289 (MQ=255)
gggTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCAAGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTCCATTAAAGGTCCCTGACGCCTCAGTCACGACAAAGCCG‑TAAAACCCTTCTTCAATGGCGGAAAGCGCCgggca > 2:1614735/1‑287 (MQ=255)
gTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTa < 1:668715/219‑1 (MQ=255)
tttCGGCCCCTGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGc < 1:1196147/289‑1 (MQ=255)
cgtttCTCTTTTATTTCTGCTTCGTTAACGTGTCAT‑ACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACt < 1:809435/286‑1 (MQ=255)
tctcTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCg < 2:1628828/289‑1 (MQ=255)
ctTTTATTTCTGCTTCGTTAACGTGTCATAACTGTTCATCAAATTACGATAATCAGGAATGTGGTTAGCGAACAACGTCGCCAGACCTTCCATATCATTACGCCAATCGCGATGCAGCTCACACGCCACG‑CCGAACTATGTCATCAATTGCGTACCAGCTTGCAACACGCGAT‑ACCAGCCCGAATGCGGTGTAATTTCATTAAAGGTCCCTGACGCGTCAGACACGACAAA‑ACGCTCACACTCTTCTCCATCGGCTTCACGCTCCCGGAAGGACACGCCAACTTCgttc > 2:1128470/1‑286 (MQ=255)
ttttTGCTTCGTGAACGGGTAATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACTTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACcaca < 2:591530/289‑1 (MQ=255)
tttCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACcac > 2:1041756/1‑288 (MQ=255)
gCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACCCCGGc > 2:883775/1‑289 (MQ=255)
gCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGc > 2:294362/1‑289 (MQ=255)
cTTCGTTAACGTGTACAAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCa < 2:557702/289‑1 (MQ=255)
gtgtCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAAcg > 2:667477/1‑288 (MQ=255)
gTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTa > 2:1932894/1‑285 (MQ=255)
gTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTa > 2:528597/1‑285 (MQ=255)
gTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTa > 1:1613717/1‑285 (MQ=255)
gTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTa > 2:1413002/1‑285 (MQ=255)
tcatcaAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTa > 1:1358777/1‑284 (MQ=255)
tACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAAt < 1:1311601/151‑1 (MQ=255)
tACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGAc < 1:1041756/289‑1 (MQ=255)
tACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGAc > 1:502234/1‑289 (MQ=255)
tAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTccctgacgcg > 2:263331/1‑161 (MQ=255)
gAATGTGGTTAGAGAACAACGTCGCCAGTCCTTAAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTCAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTAACTGTCGCTTTGGCAGCTTTTACaaa > 2:1170050/1‑289 (MQ=255)
aggtgGTTAGAGAACAACCTAGCCAGTCCTTCAATATCATTACGCCATTCGCGATGCAGCTCGCACGCCAGG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAAt < 2:1764023/287‑1 (MQ=255)
aTGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAAt < 1:294362/289‑1 (MQ=255)
tgtgGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCt > 2:1401555/1‑263 (MQ=255)
tgGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCt > 1:1670068/1‑288 (MQ=255)
tgGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAAAGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGTCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAAAAATTACATGGTTTTTACCTTTCGCTTTTACAGTGTTTAAAAAACCtt > 2:1905200/1‑289 (MQ=255)
tgGTTAGAGAACAACGTCGCCAGTCCTCCAATATCATTACGCCAGTCGCGATGCATCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCCGCTTGAGACAAGCGAT‑CCCATGCCGACTGCCGGGCAATCTCATTAAGGGTCCCTGACGGGTCCGTCACGACCAGCACG‑TCAATCCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTGCGTTACCAACACGTCCATAAGTAACTGCTTTTTCCCTGTCGCTTTGACAGCTTTTACAAActct > 2:1019014/1‑288 (MQ=255)
gTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCg > 1:253873/1‑289 (MQ=255)
gTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCg > 1:916381/1‑289 (MQ=255)
ttggagaACAACGTCGCCAGTCCTTTAATATCATTACGCCCATCGCGATGCAGCTCGCACGCCACG‑CCGCACCATGTCATCAATTGCGAACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCCATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCg < 1:646347/285‑1 (MQ=255)
gtAGAGAACAACGTGGCAATTCGTACAATCTCATTACGCGAGTCGCGAACAAGCTCGCACGCCACT‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGCCG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGt < 2:203072/288‑1 (MQ=255)
agagAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTa > 1:124554/1‑289 (MQ=255)
acaacGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCACTGACGCGTCAGTCACGACCAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCCCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAACTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATATTCTTTATCCCa > 2:1098769/1‑289 (MQ=255)
ccAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTACGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCCGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTGGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAat > 1:580028/1‑289 (MQ=255)
cAGTCCTTCAATATCATTCCGCCAGTGCCGATGCAGCTCGCCCGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAata < 2:383695/289‑1 (MQ=255)
gTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCCAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCCTTTACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATAtt > 2:1221871/1‑289 (MQ=255)
atCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGa < 1:1948600/289‑1 (MQ=255)
atCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGa < 1:1164192/289‑1 (MQ=255)
atCATTACGCCAGTCGCGATGCAGCTCGAACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGa < 2:824210/289‑1 (MQ=255)
tCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGTCGa > 1:1495273/1‑288 (MQ=255)
tCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAg < 2:1805249/289‑1 (MQ=255)
tCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAg < 2:1670068/289‑1 (MQ=255)
tCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCAGCAATTGCGCACCAGCTTGCGACAAGCGAG‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCGAGGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAg < 1:742038/289‑1 (MQ=255)
cctttACGCCGGTCGCGATCCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAg < 1:1905200/286‑1 (MQ=255)
ttACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCaa > 1:482535/1‑289 (MQ=255)
ttACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCa > 2:618207/1‑288 (MQ=255)
ttACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCa < 1:618207/288‑1 (MQ=255)
tACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAAt < 1:1286225/289‑1 (MQ=255)
aCGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATg > 1:924730/1‑289 (MQ=255)
cGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGa > 1:213273/1‑282 (MQ=255)
gTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCa > 2:778694/1‑255 (MQ=255)
gTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCa < 1:778694/255‑1 (MQ=255)
tCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCa < 1:101326/132‑1 (MQ=255)
tCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGgtg > 1:1563612/1‑289 (MQ=255)
cgcgATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGgtg < 1:1317943/288‑1 (MQ=255)
cgcgATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGgtg < 2:502234/288‑1 (MQ=255)
aGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCTAGGCGTTAATATTTTCCGGGCGAGCAATGTAAGGTGTATCGGGGa > 1:1743985/1‑289 (MQ=255)
aGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGa > 1:1675775/1‑289 (MQ=255)
tcgccggccacg‑ccGAACCATGTCATCAATTGGGCACCAGCTTGCGACAAGCGAT‑CCCAGGCCGAATGCCGGGTAATTTCACTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAAtt < 2:1685504/283‑1 (MQ=255)
acgccacg‑ccGAACCATGTCATCAATTTCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTGAGGCACGACAAAGACG‑TCAAAACCTTATGCAATGGCTGCAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAAGTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCCTTATCCCAGGCGTGAATATTTCCCGGGCGAGCAATGAAAGGTTGATCgggggacttt > 2:957011/1‑281 (MQ=255)
acgccacg‑ccGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATtgt > 1:1768936/1‑287 (MQ=255)
acg‑ccGAACCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCa > 2:345214/1‑72 (MQ=255)
aCCATGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTgg > 2:1553464/1‑289 (MQ=255)
tGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAAt > 1:1923613/1‑209 (MQ=255)
tGTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACt > 1:1946978/1‑289 (MQ=255)
gTCATCAATTGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTa < 2:1318728/289‑1 (MQ=255)
tGCGCACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGt > 1:374632/1‑289 (MQ=255)
cgcACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTa > 2:765765/1‑289 (MQ=255)
cACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCttt > 1:975367/1‑262 (MQ=255)
cACCAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAgg > 1:1381431/1‑289 (MQ=255)
cAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGAcc < 2:482535/289‑1 (MQ=255)
cAGCTTGCGACAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGAcc < 1:1407603/289‑1 (MQ=255)
gcttgcgacAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCATTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGTCGAGCAATGTAAGGTGTTTCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGACCgg > 1:1797997/9‑289 (MQ=255)
cttgcgacAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGCTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATggg > 2:1923117/8‑275 (MQ=255)
gacAAGCGAT‑CCCATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGACCGGTTTCaa < 1:765765/287‑1 (MQ=255)
cccATGCCGAATGCCGGGTAATTTCATTAAAGGTCCCTGACGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCTGAAAGCGCCGGGTATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTGAGGACCGGTTTGAAAACtggcggg > 2:130473/1‑288 (MQ=255)
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GGGAATTAATCGGTCGCGGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAATCATAACAACCGGGGTTTCGGCCCCGGTTCTCTTTTATTTCTGCTTCGTTAACGTGTCATAACTGGTCATCAAATTACGATAATCAGGAATGTGGTTAGAGAACAACGTCGCCAGTCCTTCAATATCATTACGCCAGTCGCGATGCAGCTCGCACGCCACG‑CCGAACCATGTCATCAATTGCGCACCAGCTTGGCTCAAGCGAT‑CCCATGCGCTATGCCGGGTAATTTCATTAAAGGTCCCACTCGCGTCAGTCACGACAAAGACG‑TCAAACCCTTCTTCAATGGCACTAAGCGCCGGGAATGCCACGCAAACTTCGGTTACCACACCGGCAATAATTAACTGTTTTTTACCTGTCGCTTTGACAGCTTTTACAAAATCTTCGTTATCCCAGGCGTTAATATTTCCCGGGCGAGCAATGTAAGGTGTATCGGGGAATTGTGCTTTCAGTTCTGGAACTAATGGGCCGTTAGGACCGGTTTCAAAACTGGTGGT > CP042583/807723‑808283
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
