Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,044,767 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,044,7670AT100.0% 548.3 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (109/125);  total (109/125)
*CP0425831,044,7680GC100.0% 550.7 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (109/125);  total (109/125)
*CP0425831,044,7690CG99.6% 555.4 / ‑4.4 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (109/124);  minor base A (0/1);  total (109/125)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01

Only 100 of 234 total aligned reads displayed.

TACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCAAGTCGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGAGCGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAA  >  CP042583/1044493‑1045047
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                      
tcccGGTACCGGCCGGCTCGGCTGGACGATGGCTTGAGGTTCCGGTCAGTTGTTAATCGTTCTGCTCTCTGGTCGCAGGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCg                                                                                                                                                                                                                                                                            <  2:632203/287‑1 (MQ=255)
     gTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACCCAGCTAAGGAAACGAGATGACCCGTCCGATCCAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTTGCCGCCAGGCCGCGACGCACGCGCGCGTCGGGTCGGGGGTAAAAGCGAAc                                                                                                                                                                                                                                                                         >  1:479620/1‑287 (MQ=255)
     gTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCCCGCGCGCGACTGGTCGGTGGTAAAAGCGAAc                                                                                                                                                                                                                                                                         >  1:1709748/1‑287 (MQ=255)
     gTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAAc                                                                                                                                                                                                                                                                         >  1:1631488/1‑287 (MQ=255)
     gTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACCCCAGCGATCCCATATGAGGATCTAAGCGTAACTCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGTCGCACACAGCTAAGGAAACGAGATGAACCGTCCGATACAGGACAGCCTCGATCTGCAGGCATTAAAAAAGAAACTTATCATTGTCCGCCAGGCCGCGACTCATGCGCGCGTCTGGTCGGTGGTaaagtcgcacg                                                                                                                                                                                                                                                                        >  2:1392768/1‑280 (MQ=255)
        aCGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCtt                                                                                                                                                                                                                                                                     >  2:1436072/1‑288 (MQ=255)
              cGCTCGGCTGGACGGTGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCa                                                                                                                                                                                                                                                              <  1:1522512/289‑1 (MQ=255)
              cGCTAGGCTGGTCGTTGGGTTGGTGTTCCGGGCAGTTGTTAAGAGCTCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCAAACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCa                                                                                                                                                                                                                                                              <  2:1206940/289‑1 (MQ=255)
               gCTCGGCTGGACGATGGCTTGCGGTTCCGGTAAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCAt                                                                                                                                                                                                                                                             <  1:1323901/289‑1 (MQ=255)
                        gACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGAAGGCATTAAAACAGAATCTGTTCATTGTCCGCCAGGCCGCGACGCACGCGCGGGTCCTGTCGGTGGTATAAGCGAACTCTTACGGGcctcggatgtag                                                                                                                                                                                                                                                    >  2:683065/1‑278 (MQ=255)
                                         ccGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAACGCGAACGCTTACGGGCATGGTATTGAGCGGATCTGGAGCGCGAt                                                                                                                                                                                                                                   >  1:1145325/1‑289 (MQ=255)
                                                 ttgttAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCtt                                                                                                                                                                                                                                                                     >  2:323826/1‑247 (MQ=255)
                                                 ttgttAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTg                                                                                                                                                                                                                                                      <  1:1897220/262‑1 (MQ=255)
                                                 ttgttAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGcc                                                                                                                                                                                                                            >  1:103281/1‑288 (MQ=255)
                                                   tttaaccgtccTGCTCCCTGGGCGCAGGCAAGCGATCCCATATAGGGATCTAAGCGTAGCGCGCTACAGACGTGGATTTACGCCATCCCGTCCGGGCCATTTACATGGCGAAAACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCAcc                                                                                                                                                                                                                         <  2:1753649/279‑1 (MQ=255)
                                                    ttAAGCGATCTGTCGTCTGGTCGCACGCCAGCGAGCCCATATGAGGATCTAAGCGTAGCGCTCGACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCg                                                                                                                                                                                                                        <  1:1292873/289‑1 (MQ=255)
                                                           aTCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCtt                                                                                                                                                                                                                 >  1:440960/1‑289 (MQ=255)
                                                           aTCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCtt                                                                                                                                                                                                                 >  1:1753649/1‑289 (MQ=255)
                                                           aTCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCtt                                                                                                                                                                                                                 >  1:1462975/1‑289 (MQ=255)
                                                              tGCTCTCTGGTCGCATGCCAGCGATCCCATAGGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGc                                                                                                                                                                                                              <  1:1910094/289‑1 (MQ=255)
                                                              tGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGc                                                                                                                                                                                                              >  1:759869/1‑289 (MQ=255)
                                                                   tctGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCCCACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCTCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTTTCTGGAGCGCGATACGGGCCTCCGAGGGCtttttatt                                                                                                                                                                                                           >  2:155663/1‑282 (MQ=255)
                                                                   tcgtgTCGCACGCCCGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGc                                                                                                                                                                                                         <  2:1540101/285‑1 (MQ=255)
                                                                     tGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGAGCGGGGCCACCGAGGGCTTGGCATTGCtt                                                                                                                                                                                                       >  2:509846/1‑289 (MQ=255)
                                                                      ggTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTa                                                                                                                                                                                                      >  2:129161/1‑289 (MQ=255)
                                                                             cGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGa                                                                                                                                                                                               >  1:841103/1‑289 (MQ=255)
                                                                              gCCCGCGGTCCCATATGGGGATCAAAGCGTTGCGCGCGACAGCCGTGGATTTACGCCATCACCGCCGGGCCATTTAACTGGCGCAAACAGCTAAGGAAACGAGATGACCCGTCCGGTACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGaa                                                                                                                                                                                              <  2:1462975/289‑1 (MQ=255)
                                                                                cAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAaga                                                                                                                                                                                            <  2:759869/289‑1 (MQ=255)
                                                                                        ccATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATa                                                                                                                                                                                     >  1:227218/1‑288 (MQ=255)
                                                                                            atGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCa                                                                                                                                                                                                                                                              >  1:463692/1‑211 (MQ=255)
                                                                                            atGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCAATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCa                                                                                                                                                                                                                                                              <  2:463692/211‑1 (MQ=255)
                                                                                               aGGATCTAAGCGTGGCGCCGTACAGCGGTGGATTTACGCAAGAACGTCCGGGCCATTTACAGGGAGCACACAGATAAGGAAACGCGATGACCCGTCCGATACGGGCCGTCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGAATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTAc                                                                                                                                                                              <  2:239663/288‑1 (MQ=255)
                                                                                                 gATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAAt                                                                                                                                                                                      >  1:601088/1‑278 (MQ=255)
                                                                                                   tCTGAGCGTAGCTCGCTACAGCCGTGGATTTACGCCATCCCGGCCGGGCCATTTACATGGCGAACACAGCAAGGGAAACGAGATGACACGTCGGATACAGGCCAGCCTCGATCGGCAGGCATTAGAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAg                                                                                                                                                                         <  2:1709748/289‑1 (MQ=255)
                                                                                                   tCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAg                                                                                                                                                                         <  1:1810546/289‑1 (MQ=255)
                                                                                                   gctaaggtgaGCGGGCTACAGCCGGGGATTTACGCCATCCCGTCCGGGCACTTTAAATGGCGCACACAGCTAAGGAAACGAGAGGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAg                                                                                                                                                                         <  2:703672/280‑1 (MQ=255)
                                                                                                     tAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTGTGCATTGCTTAACCTGGTAGAGGCAATAACGTTAccgcagc                                                                                                                                                                        >  2:904706/1‑282 (MQ=255)
                                                                                                          gTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCgg                                                                                                                                                                    <  1:1436072/287‑1 (MQ=255)
                                                                                                          gTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCgg                                                                                                                                                                    <  1:129161/287‑1 (MQ=255)
                                                                                                              cgcgcTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGaa                                                                                                                                                              >  1:545771/1‑289 (MQ=255)
                                                                                                              cgcgcTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGaa                                                                                                                                                              >  1:2632/1‑289 (MQ=255)
                                                                                                              cgcgcTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGGGGGGGCGGCTGGaa                                                                                                                                                              >  2:115157/1‑289 (MQ=255)
                                                                                                               gggctcaggCCGGGGATTTAGGCCAACACGTCCGGGCCATTTCCAGGGCGGACAAAGTTAAGGAAACGGGATGACCGGTCCGATACAGGCCAGCCTCGATCGGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCGGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGaa                                                                                                                                                              <  2:1687503/280‑1 (MQ=255)
                                                                                                                   tACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGa                                                                                                                                                          >  1:731575/1‑288 (MQ=255)
                                                                                                                   accAGCCGTGATGTTACGCCATCACGCCCGGACCATTTCACTGGCGAACAAAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGAc                                                                                                                                                         <  2:359945/287‑1 (MQ=255)
                                                                                                                             gATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGAc                                                                                                                                                         >  1:1512043/1‑279 (MQ=255)
                                                                                                                                  acgccatcacgtcCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTgg                                                                                                                                          >  1:167117/10‑289 (MQ=255)
                                                                                                                                   cgccatcacgtcCGGGCCATTTACATCGCGCACAAAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGa                                                                                                                                         <  1:683065/281‑1 (MQ=255)
                                                                                                                                        tcacgtcCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGaaa                                                                                                                                                             >  1:876238/4‑264 (MQ=255)
                                                                                                                                        tcacgtcCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGCAAGGACCGAACCTGATGCTGGAAGGaa                                                                                                                                    >  1:1695904/4‑288 (MQ=255)
                                                                                                                                        tcacgtcCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCACGGTATTGAGCGCATCTGGAGCGCGATCGGGGCCACTGATGGCTTTGCATTGTTTAACCTGGCCGAGGCAATAAGGTTACGTGCACGCGGGCGGAAAGGACCGGTCCTGCACCTGGGAGGAt                                                                                                                                    >  2:37316/4‑289 (MQ=255)
                                                                                                                                              ccGGGCCATTTACATGGCGCAAACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTcc                                                                                                                              <  1:417715/289‑1 (MQ=255)
                                                                                                                                               cGGGCCATTTACATGGCGCACACAGCTAAGGAAACGGGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATGGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCa                                                                                                                             <  2:1522144/289‑1 (MQ=255)
                                                                                                                                                  gCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATg                                                                                                                           >  1:1150382/1‑288 (MQ=255)
                                                                                                                                                    cATTTACATGGCGCACACAGCTAAGGAAACTAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTc                                                                                                                        <  1:777258/289‑1 (MQ=255)
                                                                                                                                                              gcgcACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGACAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCAACGATGGCTTTGCATGGCTTATGCTGGACGAGGCAATAACGTTACGTGAGCGCGGAGGGAAAGGACCGAACCTGATGCTGGAGGGATTTTTCCATGCCCGGGATATGga                                                                                                              >  2:67919/1‑289 (MQ=255)
                                                                                                                                                               cgcaaaaggCTAAGGGAAGGGGAGGACCCGTCGGATCCAGGCCAGCCTCGATATGCAGGCATTAAAACAGAATCTGTCCAGTGTCCGCCAGGCCGCGGCGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGga                                                                                                              <  2:635119/280‑1 (MQ=255)
                                                                                                                                                               cgcACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCa                                                                                                                                                                                                             >  2:727179/1‑193 (MQ=255)
                                                                                                                                                                 cacacaGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTg                                                                                                                                                                                                                                                      >  2:696059/1‑150 (MQ=255)
                                                                                                                                                                 cacacaGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTg                                                                                                                                                                                                                                                      <  1:696059/150‑1 (MQ=255)
                                                                                                                                                                   cacaGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGAttt                                                                                                         <  1:817345/289‑1 (MQ=255)
                                                                                                                                                                        cTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGACCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGa                                                                                                     >  1:1007116/1‑288 (MQ=255)
                                                                                                                                                                         tAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGa                                                                                                     <  1:509846/287‑1 (MQ=255)
                                                                                                                                                                                aCGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAAt                                                                                                                                                                                      <  1:1861488/199‑1 (MQ=255)
                                                                                                                                                                                aCGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAAt                                                                                                                                                                                      >  2:1861488/1‑199 (MQ=255)
                                                                                                                                                                                aCGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCAcc                                                                                             >  1:338908/1‑288 (MQ=255)
                                                                                                                                                                                  gagaTGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCg                                                                                            >  1:1544173/1‑287 (MQ=255)
                                                                                                                                                                                       gccccGTCCGTAACAGGCCAGGCTCGGTCGGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGac                                                                                      <  2:346229/286‑1 (MQ=255)
                                                                                                                                                                                       gACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTACATGCCCAGAATCTGGAGATTTATGAACAGAACCGCCTTac                                                                                      >  2:797969/1‑288 (MQ=255)
                                                                                                                                                                                        accgctCCGAATCAGGCCAGCCTCGAACTGCAGGCATTAAAACACAATCTGTCCATTGGCCGCCAGGCCGGGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCGTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTGGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGacca                                                                                    <  2:1145325/284‑1 (MQ=255)
                                                                                                                                                                                         ccgggccGATACGGGACAGCCTCGGTCTGCAGGCATTAAAACAGAATCTGTCCGTTGTCCGCCAGGCCGCGACGAACGGGCGCGTCTGGTCGGGGGTAAAAGGGAACGCTTACGGGAATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGacca                                                                                    <  2:1275461/283‑1 (MQ=255)
                                                                                                                                                                                           cGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCt                                                                                 <  2:440960/289‑1 (MQ=255)
                                                                                                                                                                                            gTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCGTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGGTCTGGAGATTTATGACCAGCCCCGCCTGCACACCt                                                                                 >  2:1777508/1‑288 (MQ=255)
                                                                                                                                                                                                       gCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATgg                                                                                                                                                                                                                    <  1:34611/146‑1 (MQ=255)
                                                                                                                                                                                                       gCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAAc                                                                                                                                                                                                    >  1:698151/1‑162 (MQ=255)
                                                                                                                                                                                                            cctctttttGCAGGCCATAAAACCGAATCGGTCCCTTGTCCGCCAGGCCGCGACGGACGCGCGCGTCTGGTCGGTGGTAAAAGCGGACGCTTACGGGCATGGTATTGAGCGTATCTGGGGCGCGATCGTGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTgg                                                                <  2:860170/281‑1 (MQ=255)
                                                                                                                                                                                                            ccTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGaa                                                                                                                                                                                              >  2:308148/1‑163 (MQ=255)
                                                                                                                                                                                                            ccTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGAcc                                                                                                   <  1:350613/254‑1 (MQ=255)
                                                                                                                                                                                                            ccTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTg                                                                 >  1:299074/1‑288 (MQ=255)
                                                                                                                                                                                                            ccTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTg                                                                 >  1:1516015/1‑288 (MQ=255)
                                                                                                                                                                                                                  tCTGCAGGAATTAAAACAGAATCTGTCCATTGTCCGCCAGTCCGCGACGCACTCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGTGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGacca                                                                                    <  1:1846664/263‑1 (MQ=255)
                                                                                                                                                                                                                   cTGCGGGCATTAAAACAGGATCTGTACCTTGTCGGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGGGCGCGATCGGGGCAACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCa                                                         <  2:857285/289‑1 (MQ=255)
                                                                                                                                                                                                                      cAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCa                                                                                                                                                                                        >  1:1179676/1‑159 (MQ=255)
                                                                                                                                                                                                                      cAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCa                                                                                                                                                                                        <  2:1179676/159‑1 (MQ=255)
                                                                                                                                                                                                                           aTTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACt                                                  >  1:1022722/1‑288 (MQ=255)
                                                                                                                                                                                                                              aaaaCAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGacca                                                                                    <  2:1018139/251‑1 (MQ=255)
                                                                                                                                                                                                                                          gTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTa                                  >  1:293228/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTaaaa                               <  2:167117/289‑1 (MQ=255)
                                                                                                                                                                                                                                               ttGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGc                             >  1:1876292/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCGGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTTACAACCTGAGTACACAGACACTGTCAGCTCAAAGCACTTCAAAACTCGCGGCTAAAAg                              >  2:269327/1‑288 (MQ=255)
                                                                                                                                                                                                                                                tgcacGCCAGGCCGCGACGCATGCGCGGGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCAGGGTATTGAGCGTATCTGGGGCGCGATCGGGGCAACCGATGGCTTTGCATTGCTTAAACTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGAACAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCa                            <  2:479620/285‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACCGCAAATGGCAGCTCAAAGCACTGCAAAATCCCCGGCAAAAAGCCCCGtt                       >  2:967553/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          gCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATgcg                                        >  2:1834318/1‑267 (MQ=255)
                                                                                                                                                                                                                                                          gCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATgcg                                        <  1:1834318/267‑1 (MQ=255)
                                                                                                                                                                                                                                                            cgcgACCAACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGTCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGatat                 <  1:67919/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cgcacgcGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATc            <  1:494976/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cgcacgcGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGGATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATc            <  1:1488798/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cgcgTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTg    <  1:967597/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cgTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTgg                                                                <  1:1953706/226‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cgTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACATGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGaa  <  2:227218/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                      
TACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCAAGTCGTCCGGGCCATTTACATGGCGCACACAGCTAAGGAAACGAGATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGAGCGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAA  >  CP042583/1044493‑1045047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A