Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,045,235 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,045,235 | 0 | A | T | 97.9%
| 552.0
/ NA
| 241 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (103/130); minor base C (5/0); total (111/130) |
| Fisher's exact test for biased strand distribution p-value = 1.83e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,045,236 | 0 | G | C | 97.9%
| 547.5
/ NA
| 241 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (4/1); new base C (107/129); total (111/130) |
| Fisher's exact test for biased strand distribution p-value = 1.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,045,237 | 0 | C | G | 98.8%
| 563.6
/ ‑2.2
| 241 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (108/129); minor base . (3/0); total (111/130) |
| Fisher's exact test for biased strand distribution p-value = 9.75e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 241 total aligned reads displayed.
CCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGAGCCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTAGCTTGTCCAATAGCGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTAGCCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCC > CP042583/1044958‑1045515
|||
ccTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGGCGGC‑GTTCGTTGTCCAAt > 1:957385/1‑289 (MQ=255)
ccaccTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCCAttcggt > 1:286264/1‑284 (MQ=255)
ccTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAAttcggcggc < 1:1874045/289‑9 (MQ=255)
aGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGATTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGc > 1:1407359/1‑289 (MQ=255)
aaCTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCAc > 1:1209930/1‑288 (MQ=255)
aaCTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCAc > 2:338048/1‑288 (MQ=255)
gCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGTCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCCATTCGGCCGCGGCTCTGTGGCACGCggga > 2:1354829/1‑287 (MQ=255)
agatCAAAGGACTGCAAGATGCGCGGCTAAAAGGACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGCAGCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAg < 2:1154757/285‑1 (MQ=255)
aGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAgc > 1:173418/1‑289 (MQ=255)
tGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTTGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCAGTTTGAcgg > 1:1288311/1‑287 (MQ=255)
aaaTGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGtt < 1:1247060/289‑1 (MQ=255)
gcgGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCgg > 1:1932776/1‑286 (MQ=255)
gcgGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGcc < 1:481287/288‑1 (MQ=255)
gcgGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGcc < 1:34041/288‑1 (MQ=255)
gcgGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGcc < 1:917317/288‑1 (MQ=255)
gcgGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCGGTGGCACCCGGAAGCGCATTTTTGCGGGGTTCGGccg > 2:656193/1‑288 (MQ=255)
tAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCa < 1:631680/288‑1 (MQ=255)
aGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCattatt < 1:712424/289‑1 (MQ=255)
cGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGTGTGTCGGC‑GTCCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGGAGTTTGCTCGGGTTCGGCCTGGCCTTATTTTGtt > 2:324039/1‑288 (MQ=255)
cGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTa > 1:1945618/1‑289 (MQ=255)
ttGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGCTGTCG‑TTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGACGCGCATTTTGACTGGGTTCGGCATGGCATTATTTGGTATg > 2:704771/1‑289 (MQ=255)
tatTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Ct > 1:1372310/1‑289 (MQ=255)
aTCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Cttcgcc > 2:728800/1‑284 (MQ=255)
aTCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCGGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGGCTGGCTTTATTTTGTATGGCG‑Cttcgc > 2:670474/1‑284 (MQ=255)
cTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Cttcgccgt < 2:717402/289‑8 (MQ=255)
cTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTACCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Cttcgccgt < 2:240298/289‑8 (MQ=255)
cTTAAAGTGAACAGGGGGAGGAATCGGTTGGGCTTCCAGCCCGTTCGCGGGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGGGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Cttcgccgt < 2:1527295/289‑8 (MQ=255)
ttAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑Cttcgccgtc < 2:62344/289‑9 (MQ=255)
agacgggggagggttCGGTGAGGCTTCCAGCCCGATCGGGTGCTTACCGTCTGGCAGAAGTTGCGGGCAAGGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGCAGCGGAACATCCGGATGGAATTTCCGGTGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGGCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGGCTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAg < 2:1833698/274‑1 (MQ=255)
aaCAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGCAGCGGAACATCCGGATGGAATTTGAGGGGCGATCGCTCGTATTGAGCAGGCGGCGGAGGGGCTGGAGCGTCGGC‑GTTCGTTGTCCAATCAGTCGGCGGCTCGGTGGCCTCCGGGAGCGCATTGTGCGTGGGTTCGAGCTGGCACTATTTTGTTTTGGG‑CTTCGCCGTCCGGTcgtg > 2:1047147/1‑286 (MQ=255)
aaCAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAg < 2:173418/288‑1 (MQ=255)
aaCAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGt > 2:1270814/1‑289 (MQ=255)
aaCAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTAGCCGTCCGGTCAGt > 1:1227747/1‑289 (MQ=255)
aTGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGat < 1:324505/288‑1 (MQ=255)
aTGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATATTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGat < 1:1848573/288‑1 (MQ=255)
cGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCa > 1:164147/1‑241 (MQ=255)
cGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCa < 2:164147/241‑1 (MQ=255)
ggtGGGCTTCGGGCCGGATAGCGTGCTTGCCGTCTGGCAGCAGTTGCGGGCAAGGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGGGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCaa < 2:1288311/286‑1 (MQ=255)
gCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCgg > 1:295496/1‑289 (MQ=255)
ccAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGAtt > 1:661400/1‑288 (MQ=255)
aGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCa > 1:455428/1‑228 (MQ=255)
gATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGACGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCCGTGGCGTGCTATCGCCAATCCCGGATTAC‑GTCCgg > 2:1461585/1‑289 (MQ=255)
aTCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGat < 1:354932/263‑1 (MQ=255)
aTCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGc < 1:1267495/268‑1 (MQ=255)
aTCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGt > 1:726795/1‑289 (MQ=255)
aTCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGGCAGTGGCGTGat > 2:354932/1‑263 (MQ=255)
cgcgGGCTTAACGGCTGGCAGCAGTTGCGGGCAATGGCGAAGGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGtga < 2:1406280/289‑1 (MQ=255)
tGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGACTGGCATTATTTTGTATGGCG‑CTTCGCCGTcc > 2:1369368/1‑242 (MQ=255)
ttACCGGCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCt < 1:1544995/289‑1 (MQ=255)
aCCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGTATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTaa > 2:1115132/1‑289 (MQ=255)
ctggaggcggTTGCGGGGAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGt < 1:1095464/280‑1 (MQ=255)
cTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGt < 2:953492/289‑1 (MQ=255)
cTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGt < 1:95014/289‑1 (MQ=255)
ggCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGCGGGGCTGGAGTGTCGGC‑GTTCGTTTTCCAATTCGGCGGCGACTCTGTGGCACCCGGCAGCGCATTTTGGCTGGGTTCGGCCTGGCATTATTTTGTATGGCGACTAG‑CCGGCGGGTCAGGGGGGTGGTATCGCCAATGTCGG‑TTACAGTCCGGTGATGCCCGTAAGccggtg > 2:462097/1‑284 (MQ=255)
ggagtgacGGGCAATGGCGAATGTTGGAGAAAGGACCCTGATGTCGCATTTGGCCGAAGCGGAACACCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTAGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGat < 2:488253/281‑1 (MQ=255)
agTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGTGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGatta < 1:1053826/288‑1 (MQ=255)
tGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGGGGGATTATTGGTGTCCAGa > 1:1033698/1‑288 (MQ=255)
aTGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGGGATGACGCTAAGCCGGGAGATTATTGGTGTCCAGa > 2:1867162/1‑282 (MQ=255)
ggCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGtga < 1:887290/244‑1 (MQ=255)
gCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCggg > 1:305127/1‑289 (MQ=255)
aTGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCATGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGATGCGCATTTTGACTGGGTTCGGCCTGCCATTATTTTGTATGGCG‑CGTCGCCGTCCGGTCAGTGGCCTGATATCCCCACTACCGGGTTCC‑GTCCGCGGATTACGCTCAGCCGCGGGATCCTTGGCGTCACGACGCTCAAACCGGGCGacc > 2:1619471/1‑287 (MQ=255)
cccggatgtcggaTTTTGCCGAAGCGGAACATCCTGATGGGATTTCCGGCGGGATGGCGCGTATTGAGCAGGCGGCGGGGGGGCTGGGGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCgtgt < 2:902409/277‑1 (MQ=255)
cccTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCAGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCgtg < 1:1782473/288‑1 (MQ=255)
cgcATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cg < 1:214466/286‑1 (MQ=255)
cgcATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cg < 2:305127/286‑1 (MQ=255)
gcATTTTGCCGAAGCGGAACATCCTGATGGTATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 1:1115132/288‑1 (MQ=255)
gcATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 1:316330/288‑1 (MQ=255)
gcATTTTGCCGAAGCGGAACAGCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCCGGCGGCGGAGGGGCGGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACGGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 2:419674/288‑1 (MQ=255)
gaTTTGGCCGAGGCGGGACGTGCTGAGGGAAGTTCGGGGGGGATGGGGGGTAGTGAGCAGGGGGCGGGGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 2:1426739/287‑1 (MQ=255)
cATTTTGCCGAGGCGGAACATCCTGATGGAAGTTCCGGCGCGATGGGGCGTATTGGGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 2:870291/288‑1 (MQ=255)
cATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 2:1948805/288‑1 (MQ=255)
aaTTGTGCCGAAGCGGAGCATCCGGATGGAATTTCCGGGGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGGGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggc < 2:1102218/287‑1 (MQ=255)
aTTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGGGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑cggcgg < 2:296480/289‑1 (MQ=255)
tGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCGGTCCGGTCAGTGGCGTGGTATCGCCACTAGTGGATTAC‑GTCCGGTGATGACGCTAAGCAGCGCGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTAGcggcgtct > 2:203889/1‑285 (MQ=255)
tGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTTATATCGCCAATACCGGTTTAC‑GTCCGGCGACGACGCTAAGCAGTGAGACTATTGGTGTCCAGACGCTACAAGCGCGCGCTCGTGTGGCCTA‑CGGCGTTc > 2:1430435/1‑287 (MQ=255)
tGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTc > 1:695778/1‑287 (MQ=255)
aaGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCtata < 2:1209930/288‑1 (MQ=255)
aCATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTgcgcgc < 1:1763993/289‑1 (MQ=255)
ccTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAACTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAg > 1:1431425/1‑212 (MQ=255)
aTGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTTATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCCTTACTGCCCGCGagacaca > 2:1816443/1‑283 (MQ=255)
aTGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACa > 1:796832/1‑289 (MQ=255)
tttCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGaa > 2:784910/1‑288 (MQ=255)
tttCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGaa > 1:1320389/1‑288 (MQ=255)
cgcgATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCAt < 1:1354829/288‑1 (MQ=255)
gcgcGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTcgcc < 1:1490337/288‑1 (MQ=255)
cgcgTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTcgccg < 1:763004/288‑1 (MQ=255)
aTTGGGCGGGCGGCGGGGGGGCTGGGGTGTCGGA‑GGTCGTTGTCCAGTTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATGTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGt < 2:1719596/289‑1 (MQ=255)
caggtgtgggAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGcc < 1:254993/280‑1 (MQ=255)
cAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGcc < 1:999127/288‑1 (MQ=255)
gcggcgGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGTTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGAGGAACAGCGAACCGCCATTGTCGCCCCAGGGTACGCCCACg > 2:1809569/1‑289 (MQ=255)
gcggcgGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACg > 1:387626/1‑289 (MQ=255)
gcggcgGAGGGGCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACg > 1:1581976/1‑289 (MQ=255)
ggCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTACGCAGTGAGATTATTGGGGTCCATACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTTCGCGCGATGAACAGCGAATCGGCATTGTCGCCGACGGGTACGCCGTCGGTTAACcgc > 2:286689/1‑288 (MQ=255)
ggCTGGAGTGTCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGAATATTGGTGTCCAGACGCTAAAAGCGGGCGCGCGTGTGGGCTA‑CTGCGGGTGCTATACTTCGCGCGATGAACAGCGAATCGGCCTTGTCGCCGACGGTGACGCCGGCGGTTATCcgc > 1:1140250/1‑288 (MQ=255)
gtCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACgcgc < 1:1863971/288‑1 (MQ=255)
tCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCa < 2:588633/174‑1 (MQ=255)
tCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGa < 1:19872/176‑1 (MQ=255)
tCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGa > 2:19872/1‑176 (MQ=255)
tCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGcc > 2:1911560/1‑288 (MQ=255)
tCGGC‑GTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGACGGGCCCGTTACGCAGCGCGATGAACAGCGAATCCGCATTGTCGCCTCTGGGAACGCCCACGGTTATCCGTGacacccctc > 2:1686979/1‑283 (MQ=255)
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CCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGAGCCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGC‑GTAGCTTGTCCAATAGCGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCG‑CTAGCCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTAC‑GTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTA‑CGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCC > CP042583/1044958‑1045515
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
