Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,046,721 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,046,7210AT98.4% 437.3 / NA 191intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (94/93);  minor base G (0/3);  total (94/97)
Fisher's exact test for biased strand distribution p-value = 2.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,046,7220CG99.0% 444.2 / NA 191intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (93/96);  total (94/97)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,046,7230TA99.5% 451.0 / NA 191intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (93/97);  minor base C (1/0);  total (94/97)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 191 total aligned reads displayed.

TCCCGACCAATTACACACAACACATCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGACTCACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCAGCTGAGACTTGTTCCCTGCAAGAGCAGACTAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACGCTAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGA  >  CP042583/1046449‑1046985
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                      
tCCCGACCAATTACCCACAACACATCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAag                                                                                                                                                                                                                                                           <  1:1733608/288‑1 (MQ=255)
      ccAATTACACACAACACATCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGAACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAgt                                                                                                                                                                                                                                                     <  1:1841405/288‑2 (MQ=255)
            gcacacaACACATCGCCTACGACCAGTCGGGTGCTGCCGGTA‑GGAGGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAgtgaaacca                                                                                                                                                                                                                                              <  2:154706/288‑9 (MQ=255)
             cacacaACACATCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAg                                                                                                                                                                                                                                             <  1:305533/289‑1 (MQ=255)
                  aacacaTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACAGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCGACGATAGTCCTGTTCCCTGCAAGAGCAgggacaacagaacc                                                                                                                                                                                                                                         >  2:879648/1‑275 (MQ=255)
                  aacacaTCGCCTTCGCGCAGTCGGGAGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCCATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCACACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAAcc                                                                                                                                                                                                                                         >  1:1658089/1‑288 (MQ=255)
                    cacaTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAg                                                                                                                                                                                                                                             >  1:658417/1‑282 (MQ=255)
                    cacaTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACcaca                                                                                                                                                                                                                                      >  1:344697/1‑289 (MQ=255)
                    cacaTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAAATGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAg                                                                                                                                                                                                                                             <  1:485040/282‑1 (MQ=255)
                    cacaTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAAATGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAg                                                                                                                                                                                                                                             >  2:485040/1‑282 (MQ=255)
                       aTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCTCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAaag                                                                                                                                                                                                                                   >  1:1430192/1‑289 (MQ=255)
                       aTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAaag                                                                                                                                                                                                                                   >  1:697915/1‑289 (MQ=255)
                       aTCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAaag                                                                                                                                                                                                                                   >  1:1763584/1‑289 (MQ=255)
                        tggCCGTCGCGCAGTCGGGTGCTGCCGGTAGGGATGAAGCAGCTGGTTATCACGAGACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAaag                                                                                                                                                                                                                                   <  2:1276023/287‑1 (MQ=255)
                         cGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAaagaa                                                                                                                                                                                                                                 >  2:827874/1‑289 (MQ=255)
                           actacgagccgTCGGGTGCTGCCGGTA‑GGATGAAGAAACTGGTTATCACGAACCAGTGCCGCAATACGCGGCTCGTTTTGCATATGCAAATCGCGCAGTGCCGCGCCCACGCATCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAgg                                                                                                                                                                                                                               <  2:310097/279‑1 (MQ=255)
                            cTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGc                                                                                                                                                                                                                              >  2:964875/1‑289 (MQ=255)
                              tCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAAACAGAACCACAAAGAAGGCg                                                                                                                                                                                                                             >  1:1802908/1‑288 (MQ=255)
                                       cGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGa                                                                                                                                                                                                                   >  1:1668204/1‑289 (MQ=255)
                                                  gttA‑GGATGAAGCAACTGCTTATCACGAAACAGTTCCGCTATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCa                                                                                                                                                                                                        <  1:1141848/287‑1 (MQ=255)
                                                  ggTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCa                                                                                                                                                                                                        <  1:160749/289‑1 (MQ=255)
                                                  ggTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCa                                                                                                                                                                                                        <  1:1713456/289‑1 (MQ=255)
                                                         aTGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTcc                                                                                                                                                                                                  >  2:1079242/1‑289 (MQ=255)
                                                             aGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGc                                                                                                                                                                                               >  1:1393081/1‑288 (MQ=255)
                                                                  cTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGcc                                                                                                                                                                                         <  2:546436/289‑1 (MQ=255)
                                                                   gggTTATCCCGAAACAGGGCCGCAATCCGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCca                                                                                                                                                                                        <  2:172385/288‑1 (MQ=255)
                                                                             gAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGaa                                                                                                                                                                              <  1:1725334/289‑1 (MQ=255)
                                                                               aaCAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAac                                                                                                                                                                             <  2:344697/288‑1 (MQ=255)
                                                                               aaCAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAAACACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAac                                                                                                                                                                             >  1:520442/1‑288 (MQ=255)
                                                                               aaCAGTGCCGCAAACCGCTGCTATTTTGGCATATGCAAATAGCGCAGTGCCGAGCCCACGCACCATGTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAac                                                                                                                                                                             <  2:429326/288‑1 (MQ=255)
                                                                                    tGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCACGAGCAGTGAAACCAGAACCACCAAGAAGGCGACATTCAAGAAAAGAACGGAACTCTCCAGCCCCGCCATCACAGGGAACACAGcc                                                                                                                                                                       >  2:100208/1‑289 (MQ=255)
                                                                                    tGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGc                                                                                                                                                                                               <  2:520491/265‑1 (MQ=255)
                                                                                    tGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGc                                                                                                                                                                                               >  1:520491/1‑265 (MQ=255)
                                                                                    tGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGcc                                                                                                                                                                       >  1:1297120/1‑289 (MQ=255)
                                                                                    tGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATCTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACCTTGGCTTTTTTAGCCGCCCACGAGAGTGATGCTCCCTGCAACAGCAGTGAACCCAGACCCACCAAGAAGGCAACAATAAAGTACAGGTGTGCATTCTCCAACCCCGCCATCCTCGGGAACCCggac                                                                                                                                                                       >  2:1525179/1‑287 (MQ=255)
                                                                                      ccGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCa                                                                                                                                                                      <  2:1763584/288‑1 (MQ=255)
                                                                                       cggaattgcggTCTCTTTTGGTATATGAAAATCGCGAAGTGCCGCGCCAACGTACCATCTATCGGCACTCACTTGATAAACAAACTGCTCCCACGTCTTTTCCGGATGAATATCCGGGCCAACGCGTGCCACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAATGAAGGGGCCATCAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGTGAACACGGCCAgg                                                                                                                                                                    <  2:700749/279‑1 (MQ=255)
                                                                                       cGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAgg                                                                                                                                                                    <  1:827874/289‑1 (MQ=255)
                                                                                         cAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAaca                                                                                                                                                                            >  2:1711980/1‑279 (MQ=255)
                                                                                         cAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAAGCGACATTAAAGAACAGAAGTGCATTCTCCAGCCCCGCCATCATCCGGAAACCGGCCAGcat                                                                                                                                                                  >  2:554278/1‑289 (MQ=255)
                                                                                            tactaccctctGTTGCCATATGCCAATCGCGCAGTGCCACGCCCACGCACCATTTCTCGGCACTCAAATGATAAACAAACTGCTCCCACGAATGTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAACCGCCCCCGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGgatgat                                                                                                                                                               <  1:1491122/282‑1 (MQ=255)
                                                                                                  tctcTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACTGCCAGGATGATTGGCa                                                                                                                                                          >  1:20356/1‑288 (MQ=255)
                                                                                                    tctTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAcc                                                                                                                                                        >  2:109050/1‑288 (MQ=255)
                                                                                                      ttttGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAccgcg                                                                                                                                                     <  1:1597828/289‑1 (MQ=255)
                                                                                                      ttttGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATAACCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAccgcg                                                                                                                                                     <  2:767424/289‑1 (MQ=255)
                                                                                                            cATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAccgcgccgcg                                                                                                                                                <  1:964875/288‑1 (MQ=255)
                                                                                                            cATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAcagcgccgcg                                                                                                                                                <  1:1079242/288‑1 (MQ=255)
                                                                                                            cATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGACAccgcgccgcg                                                                                                                                                <  1:327869/288‑1 (MQ=255)
                                                                                                            cATATGATAGTCGCGCAGTACACCGACAACGAACCATTTCTCGGCACTCAATTGAGAAACAAACTGCTCCCACGGATTTTCCGAATGAATATCCAGGCCAACGCGTGACACCGGACATCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAccgcgccgcg                                                                                                                                                <  2:247856/288‑1 (MQ=255)
                                                                                                                tGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGga                                                                                                                                                                   >  1:690862/1‑265 (MQ=255)
                                                                                                                tGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAAt                                                                                                                                            >  2:186335/1‑288 (MQ=255)
                                                                                                                     aTCGCGCAGTGCCGCGCCCACGCACCGTTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGTGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTAc                                                                                                                                       >  1:366580/1‑288 (MQ=255)
                                                                                                                     aTCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTAcc                                                                                                                                      <  1:186335/289‑1 (MQ=255)
                                                                                                                      tcgggcacggacgcgCCCCAGAACCATATATCGGCACTCAATTGATAAACCAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTAccc                                                                                                                                     <  2:1841287/278‑1 (MQ=255)
                                                                                                                                ccGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCATAATCCTACCCAGCTGATaaa                                                                                                                           >  2:1895390/1‑289 (MQ=255)
                                                                                                                                        aCGCACCATTTATCGGCCCTCAATTGATAAACAAACTGCCCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGCAACCAGAACCACAAAGAAGGCGACAATAAAGAACAGACGTGCATTCCCCCGCCCCGCCATCATCAGGAACACGGCCAGGCTGAATGGCACCGCGCCGGCGAATCCTACCCAGCTGATAAACACgcgc                                                                                                                    >  2:282254/1‑288 (MQ=255)
                                                                                                                                        aCGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAgtgaaacca                                                                                                                                                                                                                                              <  1:1043792/166‑9 (MQ=255)
                                                                                                                                        aCGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACgcgc                                                                                                                    >  1:580808/1‑288 (MQ=255)
                                                                                                                                        aCGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACgcgc                                                                                                                    >  1:1345836/1‑288 (MQ=255)
                                                                                                                                            accagatagcGGCACTTAACTGAACAACAAACTGCTCCCAAGGCTTTTCCGGATGAATAGCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGAGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACg                                                                                                               <  2:1451812/280‑1 (MQ=255)
                                                                                                                                            aCCATTTATAGGCACACAATTGATAAACAAACTTCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCCCTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACAACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACg                                                                                                               <  2:1076261/289‑1 (MQ=255)
                                                                                                                                                tttATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAg                                                                                                            >  2:1229222/1‑288 (MQ=255)
                                                                                                                                                  tATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGCTGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACACAGAtt                                                                                                         >  1:1451812/1‑289 (MQ=255)
                                                                                                                                                     cGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATaa                                                                                                                            >  1:502516/1‑267 (MQ=255)
                                                                                                                                                        cACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACgg                                                                                                                                                                         <  1:1210252/219‑1 (MQ=255)
                                                                                                                                                        cACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACgg                                                                                                                                                                         >  2:1210252/1‑219 (MQ=255)
                                                                                                                                                          cTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACcgc                                                                                                 >  1:855190/1‑289 (MQ=255)
                                                                                                                                                          cTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACcgc                                                                                                 >  1:1633127/1‑289 (MQ=255)
                                                                                                                                                          cTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACcgc                                                                                                 >  1:1661827/1‑289 (MQ=255)
                                                                                                                                                           tCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTAACCAGCTGATAAACAAGGGCCCACGCAGATGGaaaactgg                                                                                                >  2:931487/1‑284 (MQ=255)
                                                                                                                                                             aaTTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGa                                                                                              >  1:1457822/1‑289 (MQ=255)
                                                                                                                                                               ttGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAg                                                                                            <  1:109050/289‑1 (MQ=255)
                                                                                                                                                                     aacaaacTGCTCCCACGGATTTTCCGAATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGAGAAACCAAAACCACAAAGAAGGCGACATTAAAGAACAGACGCGCATTCTCCAGCCCAGCCACCATCGGGAACACGCTCAGGATGATTGGCAACGCGCCGCGTAATCCTACCCATCGGATAACCACACGCTCACGCAAATTGCAACACCGGAGGGGGAga                                                                                      >  2:1788387/1‑288 (MQ=255)
                                                                                                                                                                            tGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGAAAAACACCACCTCACGAACATTGCAACCGCGGAAGGGCAGCCACCCa                                                                                >  2:256429/1‑288 (MQ=255)
                                                                                                                                                                               tCCCACGGATTTTCCGGATGAATCTCCAGGCCAACGCGTGCCCCCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCaa                                                                            <  1:100208/289‑1 (MQ=255)
                                                                                                                                                                                cccACGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGGGATGTTCCCTGCAAGAGCAATGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCaaa                                                                           <  2:223191/289‑1 (MQ=255)
                                                                                                                                                                                  ctaggagtctCCGGATGAATATGCAGGCCAAGGCGCGACACAGGCCGTCCCCCTGGCGGAACCCCCACTTTTGCTTTTTTAGCCGACCACGAGAGTGATGGTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAAAACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATa                                                                         <  2:1375133/280‑1 (MQ=255)
                                                                                                                                                                                    cGGATTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAaca                                                                                                                         <  2:1182758/239‑1 (MQ=255)
                                                                                                                                                                                       aTTTTCCGGATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATAccga                                                                     <  2:855190/288‑4 (MQ=255)
                                                                                                                                                                                               gATGAATATCCAGGCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACg                                                            >  1:1376090/1‑289 (MQ=255)
                                                                                                                                                                                                    atttCCAGGCCAACACGTGCCACCGAACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGAAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGCACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCATCAAATACCGAAAGGGGACGGGCga                                                       <  1:1191818/286‑1 (MQ=255)
                                                                                                                                                                                                    atacCCAGGCCAACGCGTGACACCGGACGTCCCACGGGCGGAACCACCACTTTGGCTTTTTTAGCAGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCga                                                       <  1:221098/289‑1 (MQ=255)
                                                                                                                                                                                                            gCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGa                                                                                                                                                                                                                            <  2:507183/116‑1 (MQ=255)
                                                                                                                                                                                                            gCCAACGCGTGACACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATatc                                               >  1:1416662/1‑289 (MQ=255)
                                                                                                                                                                                                                 cgcgtgacACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCa                                          >  1:1379363/8‑289 (MQ=255)
                                                                                                                                                                                                                 cgcgtgacACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGAGAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCAAGCAAATACCGAAAGGGGACGGGCGAAGAAAaacatcaa                                          >  2:629254/8‑287 (MQ=255)
                                                                                                                                                                                                                      gacACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAg                                                                                                                                   <  1:1238271/193‑1 (MQ=255)
                                                                                                                                                                                                                             gACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGcc                                                                                                                                                                                              >  2:405218/1‑129 (MQ=255)
                                                                                                                                                                                                                                     aCTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAgg                                                                                                                                                                    >  1:798301/1‑147 (MQ=255)
                                                                                                                                                                                                                                     aCTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAgg                                                                                                                                                                    <  2:798301/147‑1 (MQ=255)
                                                                                                                                                                                                                                        ggCGGAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGTGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGaa                   <  2:366580/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTAcc                                                                                                                                      <  2:1482695/170‑1 (MQ=255)
                                                                                                                                                                                                                                            gAACCACCACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACgg                                                           >  1:40083/1‑245 (MQ=255)
                                                                                                                                                                                                                                              accaccACTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCaa             >  1:1860966/1‑289 (MQ=255)
                                                                                                                                                                                                                                              accaccACATGGGCTCTTTTAGACGCCCACGAGGGTGATGGTCCCTGCAAGTGCAGTGAAACCAGCACCACAAAGAAGGCGACATTAAAGACCAGGCGTGCATCCTCCAGCCCCGCCAGCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCGTACCCAGCTGAGAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGTGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCa              <  2:1633127/288‑1 (MQ=255)
                                                                                                                                                                                                                                                cacaccattGGCTTTTTTAGCAGCCCACGAGGGTGATGTTCCCTGAAAGAGGAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATa           <  2:652352/282‑1 (MQ=255)
                                                                                                                                                                                                                                                   cacTTTGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGgc        >  1:446150/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       ttGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCAccgcgccgcg                                                                                                                                                >  2:1326941/1‑149 (MQ=255)
                                                                                                                                                                                                                                                        tGGCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGcagcag   <  1:1229222/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          gCTTTTTTAGCCGCCCACGAGAGTGATGTTCCCTGCAAGAGCAGTGAAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGa  >  1:268030/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                      
TCCCGACCAATTACACACAACACATCGCCTTCGCGCAGTCGGGTGCTGCCGGTA‑GGATGAAGCAACTGGTTATCACGAAACAGTGCCGCAATACGCGTCTCTTTTGGCATATGCAAATCGCGCAGTGCCGCGCCCACGCACCATTTATCGGCACTCAATTGATAAACAAACTGCTCCCACGGATTTTCCGGATGAATATCCAGGCCAACGCGACTCACCGGACGTCCCACTGGCGGAACCACCACTTTGGCTTTTTTAGCCGCCCAGCTGAGACTTGTTCCCTGCAAGAGCAGACTAACCAGAACCACAAAGAAGGCGACATTAAAGAACAGACGTGCATTCTCCAGCCCCGCCATCATCGGGAACACGGCCAGGATGATTGGCACCGCGCCGCGTAATCCTACCCAGCTGATAAACACGCGCTCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACGCTAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGA  >  CP042583/1046449‑1046985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A