Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,813,774 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,813,7740GC99.7% 691.9 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (161/135);  total (161/136)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,813,7750CG99.3% 696.6 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (159/135);  minor base A (2/0);  total (161/136)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,813,7760TA99.3% 704.3 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (159/136);  minor base C (2/0);  total (161/136)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

CAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGGCTGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAAGCTAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGGCTAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACGCTACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATGCTAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACA  >  CP042583/1813494‑1814057
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                          
       catGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAAtgt                                                                                                                                                                                                                                                                                >  1:873530/1‑288 (MQ=255)
             gatgatCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGAc                                                                                                                                                                                                                                                                          >  1:352915/1‑288 (MQ=255)
              atgatCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGTTTTCGATCATCTGCATTTGCGAAACGAATAATGTGCCgcag                                                                                                                                                                                                                                                                         >  2:1372302/1‑285 (MQ=255)
               tgctattGTCCATCGTCTGTCATGCCAGCGGTTCGCTGACGATCCACTGACCGTACCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCAGTTTATGCAAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGAcgcg                                                                                                                                                                                                                                                                       <  2:438227/284‑1 (MQ=255)
                    ttGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCa                                                                                                                                                                                                                                                                   >  2:545863/1‑288 (MQ=255)
                      gTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATCATGTGCCGACGCGCGCAcgc                                                                                                                                                                                                                                                                >  1:1847443/1‑289 (MQ=255)
                      gTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAACAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTAATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGAGCAcgc                                                                                                                                                                                                                                                                >  1:1690390/1‑289 (MQ=255)
                            cGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCg                                                                                                                                                                                                                                                          >  2:941906/1‑289 (MQ=255)
                             gTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGa                                                                                                                                                                                                                                                         <  1:1185231/289‑1 (MQ=255)
                               cAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGata                                                                                                                                                                                                                                                       <  1:716860/289‑1 (MQ=255)
                                      gCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAata                                                                                                                                                                                                                                                 >  2:1429715/1‑288 (MQ=255)
                                                cGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTc                                                                                                                                                                                                                                      >  2:1925342/1‑289 (MQ=255)
                                                             cTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCCCGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTATg                                                                                                                                                                                                                         >  1:1748971/1‑289 (MQ=255)
                                                             cTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTg                                                                                                                                                                                                                         >  1:1857196/1‑289 (MQ=255)
                                                                  cGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGAt                                                                                                                                                                                                                                                                                     >  2:76682/1‑224 (MQ=255)
                                                                  cGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGAt                                                                                                                                                                                                                                                                                     <  1:76682/224‑1 (MQ=255)
                                                                  cGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGttt                                                                                                                                                                                                                     >  2:1825461/1‑288 (MQ=255)
                                                                     cgcgCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTcgc                                                                                                                                                                                                                  <  2:314812/288‑1 (MQ=255)
                                                                       cgcAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGt                                                                                                                                                                                                               >  1:1760715/1‑289 (MQ=255)
                                                                        gcAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGt                                                                                                                                                                                                               <  1:374660/288‑1 (MQ=255)
                                                                               ggTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTg                                                                                                                                                                                                       >  1:1575041/1‑289 (MQ=255)
                                                                                 tAACTTCATCACATAACTGGAATATTTCTTCCATTTTAGTCGGGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTGTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTc                                                                                                                                                                                                     <  2:1211210/289‑1 (MQ=255)
                                                                                    cTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTccgg                                                                                                                                                                                                  >  1:649161/1‑287 (MQ=255)
                                                                                      tcatcaCATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGa                                                                                                                                                                                                 >  1:447618/1‑288 (MQ=255)
                                                                                         tcaCATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCg                                                                                                                                                                                              >  2:1672161/1‑288 (MQ=255)
                                                                                         tcaCATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCg                                                                                                                                                                                              >  1:112151/1‑288 (MQ=255)
                                                                                         tcaCATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTC‑TTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCTCACGCGGATCGATATCAAGATCCAGTTCGTCAAACATCGCTTTGGTTTCGCGGTACATTTTTTCCTGCTCGAc                                                                                                                                                                                            >  2:1293355/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACa                                                                                                                                                                                       >  2:1530098/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACa                                                                                                                                                                                       >  2:700943/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACa                                                                                                                                                                                       >  2:1002435/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACa                                                                                                                                                                                       >  2:1113565/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAACCGCTTTGGTTTCGCGGTACATTTTGTCCGTATCGACAAACa                                                                                                                                                                                       >  2:532437/1‑289 (MQ=255)
                                                                                               aaCTGGAAGATCTCTTCCATTTTCTGCGAGATATACACAATACAGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGTACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCCTTGGAGTTTTCGATCATCTGCTTTTGCACAACGGATCTTGTGCTAGCTGACGCATGCCGCTCCATCTCTATCTCCATTGCTTCAAACTTCTCCTTTGTTGGCCGCTACATTTTGTCCTGATccgctaaca                                                                                                                                                                                       >  2:1461356/1‑281 (MQ=255)
                                                                                                 cTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGACCTCTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACa                                                                                                                                                                                       <  1:1727815/289‑1 (MQ=255)
                                                                                                    gAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑t                                                                                                                                                                                 >  1:161061/1‑289 (MQ=255)
                                                                                                      aGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑tt                                                                                                                                                                                <  2:847225/288‑1 (MQ=255)
                                                                                                         tttCTTCCAGTTTATGCAGAATATAAACAATGCCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑TTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTtggt                                                                                                                                                                            <  2:414919/289‑1 (MQ=255)
                                                                                                               ccATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAACCGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCCTTGGTTTCCGGGTAAATTTTGTCCTTATCGACAAACATGCCGTGTGTTGGGat                                                                                                                                                                       >  2:1818552/1‑289 (MQ=255)
                                                                                                               ccATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGata                                                                                                                                                                      <  1:1291624/289‑1 (MQ=255)
                                                                                                                cATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGata                                                                                                                                                                      >  1:884482/1‑288 (MQ=255)
                                                                                                                    ttattcgagATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGcc                                                                                                                                                                 <  2:781404/281‑1 (MQ=255)
                                                                                                                    ttatccgagATATAAACCATACCCCAGCCCCGCTTTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCAATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGcc                                                                                                                                                                 <  2:870484/281‑1 (MQ=255)
                                                                                                                     tatgcgagATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGccc                                                                                                                                                                <  2:733851/282‑1 (MQ=255)
                                                                                                                       tgcgagATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATATTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGTAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTACCGACGCGCGCACGCGGATCGATATCAATGTCCAGTTCGTCAAAAATCGCTTTGGTCTGGCGGTACATTTTGTCCTTATCGACAAACATTCC‑TTTGGTGGGCTATcccccc                                                                                                                                                               >  2:288264/6‑288 (MQ=255)
                                                                                                                          gagATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGc                                                                                                                                                            <  1:126656/286‑1 (MQ=255)
                                                                                                                          gagATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGc                                                                                                                                                            <  1:1377314/286‑1 (MQ=255)
                                                                                                                              tataAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCcaca                                                                                                                                                        <  1:532437/288‑1 (MQ=255)
                                                                                                                               ataAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATg                                                                                                                                                      <  1:1407079/289‑1 (MQ=255)
                                                                                                                                            cAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTTGGATATCGCCCCAGcc                                                                                                                                                           >  2:38223/1‑271 (MQ=255)
                                                                                                                                            cAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCAccg                                                                                                                                         >  2:1011239/1‑287 (MQ=255)
                                                                                                                                            cAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCAccg                                                                                                                                         >  2:219185/1‑287 (MQ=255)
                                                                                                                                            cAGCCGCGATCTTTTACTTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCTCAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGACGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAACTCGCTTTGGTTTCGCGGTACCTTTTGTCCTGATCCACAAACATGAC‑TTTGGTGGGCTATCGCTCCAGCGTCATGTTAtatagtcccc                                                                                                                                         >  2:1197244/1‑280 (MQ=255)
                                                                                                                                               ccGCGCTCTTTTAATATACGAATAATAGTAAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCAccgaa                                                                                                                                       <  1:1492157/288‑5 (MQ=255)
                                                                                                                                                cgcgCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCActgaa                                                                                                                                       <  1:145219/287‑5 (MQ=255)
                                                                                                                                                cgcgCTCTTTTAAGTGACGATTAATAGTGAACACATGATTGAC‑‑CTCTTGTTAGGTTTACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTGTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCAccgaa                                                                                                                                       <  2:1748971/287‑5 (MQ=255)
                                                                                                                                                  cgcTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAATATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCAccgaacgtt                                                                                                                                   >  1:182422/1‑281 (MQ=255)
                                                                                                                                                     tctTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCTGTTCATCCATAATCACAATTTTCGCTTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGt                                                                                                                                 <  1:1501237/288‑1 (MQ=255)
                                                                                                                                                         ttAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATAACAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTTGGATATCGCACCAGTCACATGTTAACCATCACCCAACGTTGTAATAc                                                                                                                            >  2:365710/1‑289 (MQ=255)
                                                                                                                                                          tAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATAcc                                                                                                                           <  1:389272/289‑1 (MQ=255)
                                                                                                                                                          tAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATAcc                                                                                                                           <  2:1551483/289‑1 (MQ=255)
                                                                                                                                                              ttACGAATAATAGTGAACGGCTGATTTAC‑‑CTCTTTTTCGGTTAACGAAGAAGTAGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATTTCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGt                                                                                                                       <  2:52435/289‑1 (MQ=255)
                                                                                                                                                                 cGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGcc                                                                                                                                                                 >  1:1354384/1‑244 (MQ=255)
                                                                                                                                                                 cGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATg                                                                                                                                                      <  2:1850498/255‑1 (MQ=255)
                                                                                                                                                                 cGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGAGATCGGCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTa                                                                                                                    >  1:842377/1‑289 (MQ=255)
                                                                                                                                                                      aataGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTcc                                                                                                               <  1:596305/289‑1 (MQ=255)
                                                                                                                                                                             aaCAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGccc                                                                                                                                                                >  2:1732362/1‑233 (MQ=255)
                                                                                                                                                                             aaCAGATGATTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGGTTAACTCCTGgtgt                                                                                                         >  1:1139784/1‑288 (MQ=255)
                                                                                                                                                                                  atgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTTGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTACGTCAAAAATCGCTTTGGCTTCGCGGTACATTTTGTCCTGAGCGACAAACAGGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCAACCCCGCACTTTGTAATTACAGTTTTAACTCATGGTGGACCacc                                                                                                   >  2:1560710/1‑287 (MQ=255)
                                                                                                                                                                                  atgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGccc                                                                                                                                                                <  1:301022/228‑1 (MQ=255)
                                                                                                                                                                                  atgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAtc                                                                                                   >  1:514133/1‑288 (MQ=255)
                                                                                                                                                                                  atgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAtc                                                                                                   >  1:415402/1‑288 (MQ=255)
                                                                                                                                                                                  atgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAt                                                                                                    >  2:589253/1‑288 (MQ=255)
                                                                                                                                                                                   tgatTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAt                                                                                                    <  2:484903/287‑1 (MQ=255)
                                                                                                                                                                                     atTGAC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAtcgaa                                                                                                >  1:1941709/1‑285 (MQ=255)
                                                                                                                                                                                         aC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATTCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACCCCTGGTTTACCAtctaaata                                                                                             >  2:1686465/1‑281 (MQ=255)
                                                                                                                                                                                         aC‑‑CTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCAtcgaaata                                                                                             >  1:1891198/1‑281 (MQ=255)
                                                                                                                                                                                             ctctTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCa                                                                                          <  1:1540943/289‑1 (MQ=255)
                                                                                                                                                                                             ccttttttCGGTTAACGAATAAGTCGGTTCATCCTTAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGACACGGATAATGTGCCGACGCGCGCACGCGGTTCGATATCAATATCCAGTTGGTAAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGACCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCa                                                                                          <  2:1614469/286‑1 (MQ=255)
                                                                                                                                                                                              tctTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCa                                                                                                                          >  2:1496091/1‑256 (MQ=255)
                                                                                                                                                                                                tttttCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCAAAATACCAttt                                                                                       >  2:1883747/1‑289 (MQ=255)
                                                                                                                                                                                                          aacgaaGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGct                                                                              >  1:1661023/6‑288 (MQ=255)
                                                                                                                                                                                                                  aGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCa                                                                     <  1:1928181/289‑1 (MQ=255)
                                                                                                                                                                                                                    tCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGc                                                                               <  2:1239197/277‑1 (MQ=255)
                                                                                                                                                                                                                    tCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGc                                                                               >  1:1239197/1‑277 (MQ=255)
                                                                                                                                                                                                                           aTCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGaaa                                                            >  2:1129517/1‑289 (MQ=255)
                                                                                                                                                                                                                                tAATCACAATTTTCGCGTTATAGGAAACCGCTTTGGCGATTTCGATCATCTGCAGTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGAt                                                       <  1:963446/289‑1 (MQ=255)
                                                                                                                                                                                                                                tAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGAt                                                       <  1:1005290/289‑1 (MQ=255)
                                                                                                                                                                                                                                  aTCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGACATCgtac                                                      >  2:559713/1‑285 (MQ=255)
                                                                                                                                                                                                                                      caATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCTATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCttt                                                 >  1:1032353/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cgcgTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTgg                                          >  2:1384755/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    taGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATaaaa                                   <  1:325102/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          aaCGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTg                              >  2:615913/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            cGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATAc                                                                                                                            >  1:729673/1‑192 (MQ=255)
                                                                                                                                                                                                                                                            cGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGAACTCTTTACCCTGGAATAAAATGGTGCCg                           >  1:791898/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tttCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTg                >  1:1787774/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGAt              <  1:219185/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTGCCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCa      >  1:1105117/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 cTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGAt              >  2:1556387/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                                 cTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGAt              <  1:1556387/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     aTTTGGCAAACGGATAATTGGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACa  <  2:1941709/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                          
CAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGGCTGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAATAGTGAACAGATGATTGAC‑‑CTCTTTTTCGGTTAAGCTAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGGCTAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCC‑TTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACGCTACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATGCTAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACA  >  CP042583/1813494‑1814057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A