Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,927,815 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,927,8150AT98.7% 542.9 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (112/117);  minor base C (3/0);  total (115/119)
Fisher's exact test for biased strand distribution p-value = 1.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,927,8160GC99.6% 547.4 / ‑6.3 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (113/119);  minor base T (1/0);  total (115/119)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,927,8170TA100.0% 553.5 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (115/119);  total (115/119)

Only 100 of 234 total aligned reads displayed.

AGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCAGTCAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAATTCCTCTGAAAACGTCTCGCAAAGG  >  CP042583/1927541‑1928087
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                              
         tGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGTCAACCCGCTGGCGGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCATGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGTATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTg                                                                                                                                                                                                                                                           <  1:1853732/289‑1 (MQ=255)
              acaacaAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCCCACAAGCAATCGGCGcacccccttg                                                                                                                                                                                                                                                         >  2:1933001/1‑282 (MQ=255)
              acaacaAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGCGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTcc                                                                                                                                                                                                                                                       >  1:143742/1‑288 (MQ=255)
               caacaaAGGGTGGGCCGCGCATGTCGAACTGGCAACCCGCTGGGTGTGGCGCAGGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCg                                                                                                                                                                                                                                                      <  2:1430207/288‑1 (MQ=255)
               caacaaAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCg                                                                                                                                                                                                                                                      <  1:259263/288‑1 (MQ=255)
                aacaaAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGcc                                                                                                                                                                                                                                                    <  1:892275/289‑1 (MQ=255)
                     aGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGAAGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGTTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GTGTTAACGGTGCTGGATTCCCAGTGCTTCGGCATGGCGGGTACTTACGTGTTCAAAAAAGAGAACACCCCCACCCAACAACCCATCGGCACACCACTGTTcccctataac                                                                                                                                                                                                                                               >  2:1243857/1‑281 (MQ=255)
                            cgcgATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGaaa                                                                                                                                                                                                                                        >  2:1020617/1‑289 (MQ=255)
                             gcgATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAg                                                                                                                                                                                                                                       <  1:1446284/289‑1 (MQ=255)
                                 tcaaacggAACTGGCAACCCGCTTGCTGTGGCGCAAGCTGGAGGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAgcgg                                                                                                                                                                                                                                    <  2:1290283/281‑1 (MQ=255)
                                           cTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGCGCTGTTGCCTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGGATTGCGGGTACTTACTGTTTCCAAAAAGAGAACTACCCCACCTCACAAGCCATCCGCGCACCCCTGTTCCGCCAGATAGAAGAAAGCGGCGCAGAACtgg                                                                                                                                                                                                                         >  2:1634934/1‑289 (MQ=255)
                                           cTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCtgg                                                                                                                                                                                                                         <  1:69282/289‑1 (MQ=255)
                                           cTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCtgg                                                                                                                                                                                                                         <  2:704733/289‑1 (MQ=255)
                                            tGGCAACCCGCTGGCGGTGGCGAAAACTGGACGGAGGCAAACCGTTACCGCGGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGACGGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCtgg                                                                                                                                                                                                                         <  2:958810/289‑1 (MQ=255)
                                              gCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCtggtgg                                                                                                                                                                                                                      >  1:316055/1‑289 (MQ=255)
                                                   ccGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTCCCCCACCTCACAAGCCATCGGCGCCCCACTGTTCCGCCGGATAGAAGAAAGCGGCGCAGATCTGGTGGTAAcc                                                                                                                                                                                                                 >  1:303283/1‑289 (MQ=255)
                                                             tgGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCACATAGAAGAAAACGGCGCAGATCTGGTGGTACCCGACTGCgca                                                                                                                                                                                                        >  2:1587790/1‑286 (MQ=255)
                                                              ggCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGTGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGGGGTATTTCGGGTACTTACGGGTTCAAAAAAGAGAACTACCACACCCCACCAGCCAGCGGCGCACCTCTGTTCCCGCAGCTAACAGAAAGCGGCGCAGCTGTGGTGGTcgcggcgtgaccac                                                                                                                                                                                                       >  2:1946606/1‑275 (MQ=255)
                                                               gagcAAGCGGGAAGCAAGCAAAACGTGACCGCTGAAAACGCAGCAGCTGAAAGTGGTTTATCACACTCCGTGCCATATAGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAGCCTCCCGGGGCGT‑‑TAGTTAACGGTGCTGGATTGCCAGTGCTGCGGTATTGCGGGTACTTACGGGTTCAGAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAAc                                                                                                                                                                                                      <  2:1098488/286‑1 (MQ=255)
                                                                       tGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATg                                                                                                                                                                                             <  2:730736/289‑1 (MQ=255)
                                                                              aGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGAtt                                                                                                                                                                                      <  1:945184/289‑1 (MQ=255)
                                                                                 cacaaCGTTACCGCTCGAACCGACGACACGCAACATGGTTTATCACACTCCGTGCCGTCATGAAAGAATGAGCTGCAC‑GCGCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTA‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTgag                                                                                                                                                                                   <  2:256184/286‑1 (MQ=255)
                                                                                  aaaaCGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTgag                                                                                                                                                                                   <  2:1814650/288‑1 (MQ=255)
                                                                                      cGTGACCGCTTAAACCGCTGCCGCTGAAAGTGATTTATCCCACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTc                                                                                                                                                                              <  2:577634/289‑1 (MQ=255)
                                                                                           ccGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGc                                                                                                                                                                                           >  1:193870/1‑271 (MQ=255)
                                                                                                 aaaCCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCGGTAAACGGCAGATTGAGATGTCCACAAGTCTTc                                                                                                                                                                   >  2:352314/1‑289 (MQ=255)
                                                                                                        tgccgctgAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCg                                                                                                                                                             <  1:1843522/288‑1 (MQ=255)
                                                                                                         gccgctgAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCCCTGCGa                                                                                                                                                            >  2:1217432/1‑288 (MQ=255)
                                                                                                         gcagctgAAAGGTGTTTATCACACGCCGTGCCATATGGAAAAAGTGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGa                                                                                                                                                            <  2:1665417/285‑1 (MQ=255)
                                                                                                           cgctgAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACa                                                                                                                                                         <  1:1272073/289‑1 (MQ=255)
                                                                                                                     ggTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTa                                                                                                                                                 <  1:289745/287‑1 (MQ=255)
                                                                                                                     ggTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACg                                                                                                                                               <  1:562413/289‑1 (MQ=255)
                                                                                                                        ttATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTa                                                                                                                                            <  1:728060/289‑1 (MQ=255)
                                                                                                                                 tCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTACTCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGAATGAGATGTCCACAAGTCATCGCTGCGAAACTCAGATAACCCTCCTTGCGCAg                                                                                                                                   >  2:660909/1‑289 (MQ=255)
                                                                                                                                   cGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgc                                                                                                                                 >  1:1537936/1‑289 (MQ=255)
                                                                                                                                    gTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgcg                                                                                                                                <  2:932815/289‑1 (MQ=255)
                                                                                                                                     tGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCTAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgcg                                                                                                                                >  2:249767/1‑288 (MQ=255)
                                                                                                                                     tGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACACGTCTTCGCTGCGAACATCCGATTACGACACTGGCCCAGgct                                                                                                                                >  2:1458690/1‑287 (MQ=255)
                                                                                                                                     tGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgcg                                                                                                                                >  2:1758328/1‑288 (MQ=255)
                                                                                                                                     tGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgc                                                                                                                                 >  2:1061762/1‑287 (MQ=255)
                                                                                                                                     tGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGCTCCGCCACAAATAAGAAAGCGGCGCAGACCTGGTGGTCACCGCCTGCGAAACCTGTAACTGGCAGAGTGAGATGTCCACAAGCCTTCGCTGCGAACACCCGACTACGCTACTGGCCCAGgcgc                                                                                                                               >  2:169499/1‑289 (MQ=255)
                                                                                                                                          tatGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGTTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCGGCCAGATAGCAGAACGCGGCGCACAGCCGGTGGTCACCGACTCCGAAACCTGGAAATTGCATATTAAGAGGTCACGTCGTCATGGTGGTGAACCTCCGAATACGCTACTGGCCAAGGCCCTggat                                                                                                                          >  2:823268/1‑287 (MQ=255)
                                                                                                                                           atGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTa                                                                                                                                            >  2:450441/1‑270 (MQ=255)
                                                                                                                                           atGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCtt                                                                                                                         >  1:1325214/1‑289 (MQ=255)
                                                                                                                                               aaaaaaGGGGCTGGAC‑GCTCTACACCCTGGCGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTaaa                                                                                                                      <  2:676512/288‑1 (MQ=255)
                                                                                                                                                           ggAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATg                                                                                                         <  1:747585/289‑1 (MQ=255)
                                                                                                                                                              c‑GCTCTAAACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGcc                                                                                                       <  1:957044/288‑1 (MQ=255)
                                                                                                                                                                 cgcgacacCCTGGAGCTGTTGCGTAACATCCCGGGGCTG‑‑GAGGTAACGTTGCTGGATTCCCAGTGCTGCGGTAGTGCGGGTACTTACGGTCTCAAAAAAGAGAACTACCCCACCGCACAAGCCATCGGCGCACCACGGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCgg                                                                                                    <  2:1356492/285‑1 (MQ=255)
                                                                                                                                                                  tctACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGt                                                                                                   <  1:1084850/289‑1 (MQ=255)
                                                                                                                                                                  tctACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGt                                                                                                   >  1:1760033/1‑289 (MQ=255)
                                                                                                                                                                       acCCTGGGGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTGAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCa                                                                                              <  2:1072795/289‑1 (MQ=255)
                                                                                                                                                                       acCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCa                                                                                              >  1:852711/1‑289 (MQ=255)
                                                                                                                                                                       acCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCa                                                                                              <  1:262978/289‑1 (MQ=255)
                                                                                                                                                                         ccTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGTTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCAtg                                                                                            >  2:1078274/1‑289 (MQ=255)
                                                                                                                                                                         ccTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACCCCTTTCGTATGCCCGGTAAGCAtg                                                                                            >  2:962566/1‑289 (MQ=255)
                                                                                                                                                                           tGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCAtgtg                                                                                          >  1:758578/1‑289 (MQ=255)
                                                                                                                                                                            ggAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGACACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGTCCAGGCGCTGGATTAAACTCCTTGCTGATGCCCGGTAAGCATGTgg                                                                                         >  2:872787/1‑289 (MQ=255)
                                                                                                                                                                            ggAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGAtt                                                                                                                                                                                      >  1:161594/1‑196 (MQ=255)
                                                                                                                                                                            ggAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTgg                                                                                         >  1:1285305/1‑289 (MQ=255)
                                                                                                                                                                            ggAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTgg                                                                                         >  2:333513/1‑289 (MQ=255)
                                                                                                                                                                                 tGTTGCGTACACTCCCGGGGCTT‑‑GAGTGAACGGTGCTGGATTCCCCTGGCTGCGGTATAGCGGTTCCTTACGGTTGCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTAcc                                                                                    <  2:1849357/289‑1 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCAt                                                                                                                                                                                                                                                                        >  1:1745604/1‑107 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCAt                                                                                                                                                                                                                                                                        <  2:1745604/107‑1 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCgg                                                                                  >  1:156756/1‑289 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCgg                                                                                  >  1:1919348/1‑289 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCgg                                                                                  >  1:462857/1‑289 (MQ=255)
                                                                                                                                                                                   ttGCGTAACATCCCGGGGCTT‑‑GAGATAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCgg                                                                                  >  1:220151/1‑289 (MQ=255)
                                                                                                                                                                                           cATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCAttttt                                                                          <  1:1634934/289‑1 (MQ=255)
                                                                                                                                                                                             tCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCCGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGAGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGGTACCGGGCAttttttc                                                                        >  1:147839/1‑287 (MQ=255)
                                                                                                                                                                                             tCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGc                                                                        <  1:660909/289‑1 (MQ=255)
                                                                                                                                                                                             tCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGc                                                                        <  1:969897/289‑1 (MQ=255)
                                                                                                                                                                                               ccGGTGCTT‑‑GGGTTATCTGTGCTTGGTTCCCAGTGCGGCGGTATTGCGGGTACTTACGGTTTCCAAGAAGATAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGt                                                                      <  2:147839/289‑1 (MQ=255)
                                                                                                                                                                                                  gggCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTac                                                                    >  1:39607/1‑288 (MQ=255)
                                                                                                                                                                                                          gAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATGGAGATGTACAAAAGTCTTCGCTGCGAACATCCGATTACGATCATGGCGCAGGCGCTGGCTTAAACTCCTCTCGCATGCCCGGTACGCATGTGGTTACCGGGCATTTTTGCGTACACGaat                                                              >  2:1438088/1‑286 (MQ=255)
                                                                                                                                                                                                              tAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCGGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTg                                                         <  1:584424/289‑1 (MQ=255)
                                                                                                                                                                                                              tAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTg                                                         <  1:1749645/289‑1 (MQ=255)
                                                                                                                                                                                                                aCGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGcc                                                       <  1:1020617/289‑1 (MQ=255)
                                                                                                                                                                                                                aCGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGcc                                                       <  1:169499/289‑1 (MQ=255)
                                                                                                                                                                                                                aCGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGcc                                                       <  1:1223507/289‑1 (MQ=255)
                                                                                                                                                                                                                     gCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCAttttt                                                                          >  2:526156/1‑265 (MQ=255)
                                                                                                                                                                                                                     gCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCAttttt                                                                          <  1:526156/265‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAACCATGTGGGTACCGGGCCTTTTTGCGTCCCCGATTCCGGTCCCAATgc                                                 >  2:792592/1‑288 (MQ=255)
                                                                                                                                                                                                                          aTTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATg                                              <  1:1184831/288‑1 (MQ=255)
                                                                                                                                                                                                                          aTTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATg                                              <  2:689003/288‑1 (MQ=255)
                                                                                                                                                                                                                              ccAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGcc                                                       <  2:1532487/275‑1 (MQ=255)
                                                                                                                                                                                                                                   gctgcGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCCCCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTACGAAACCTGTACATGGCAGATTGAGATGTCCACAAGGCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACCCCTTTCTGATGCCCGCTAAGCATGCGGTTACCGGGCATTATTGCTTACACTATTCCGTGCCCCATGTAAGCTTTGCAAc                                     >  2:1861288/1‑288 (MQ=255)
                                                                                                                                                                                                                                   gctgcGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAAc                                     <  1:1061762/288‑1 (MQ=255)
                                                                                                                                                                                                                                   gctgcGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCAACTAGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAAc                                     >  1:363853/1‑288 (MQ=255)
                                                                                                                                                                                                                                     tgcGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTa                                                                                                                                                 >  1:681068/1‑178 (MQ=255)
                                                                                                                                                                                                                                       cGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGcac                                                                                                                                                                                                                                                                >  1:1172/1‑65 (MQ=255)
                                                                                                                                                                                                                                       cGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGcac                                                                                                                                                                                                                                                                <  2:1172/65‑1 (MQ=255)
                                                                                                                                                                                                                                       cGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTTGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGgcg                                                                                                                                <  1:1851536/193‑1 (MQ=255)
                                                                                                                                                                                                                                            ttGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGcc                                                                                                       >  2:269216/1‑213 (MQ=255)
                                                                                                                                                                                                                                            ttGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGCCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTCTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGaaaa                           >  1:42368/1‑289 (MQ=255)
                                                                                                                                                                                                                                              gCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGTCTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAAtt                         <  1:80052/289‑1 (MQ=255)
                                                                                                                                                                                                                                               cGGGTACTTACGGTTTCGAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAAtt                         >  2:223903/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aCTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAATTCCTCTg                   >  2:1883074/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAATTCCTCTGAAAACGtctc         >  1:1529156/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 aaaaaGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAATTCCTCTGAAAACGTCTCGCa      <  1:865334/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gagaACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTCAGCATGTGGTTACCGGGCATTTTTGCGTCCCCTATTCCGTGCCCCATGTATGCGTTGCCACCCAGTGAAACTTCCTCTGAAAACCTCCCGcccagg  >  2:1140004/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                              
AGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGAC‑GCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTT‑‑GAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCAGTCAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGCGTACACGATTCCGTGCCCAATGTATGCGTTGCAACGCAGTGAAAATTCCTCTGAAAACGTCTCGCAAAGG  >  CP042583/1927541‑1928087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A