Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,929,337 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,929,337 | 0 | A | T | 98.6%
| 507.6
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (121/91); minor base G (2/1); total (123/93) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,929,338 | 0 | C | G | 99.5%
| 507.8
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (123/91); total (123/93) |
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,929,339 | 0 | T | A | 99.1%
| 499.3
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (120/93); minor base C (2/0); total (123/93) |
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 216 total aligned reads displayed.
ATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCACTTTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAAGCTCGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGAT > CP042583/1929058‑1929615
|||
aaGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGc < 1:1493296/289‑1 (MQ=255)
agaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGGCg > 1:1227463/1‑289 (MQ=255)
agaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAAGTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCCATAAC‑TAACTTTTATGCGTGG‑CCCATTTTTGCCTGATTTaaa > 2:1233033/1‑277 (MQ=255)
ttAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTg < 2:874551/289‑1 (MQ=255)
tGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATcc > 1:86416/1‑289 (MQ=255)
tATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAggg < 1:919472/289‑1 (MQ=255)
caggCTGAACGGCTTGGGGAGGAAGGCAATCAAATGGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAggg < 2:1843443/285‑1 (MQ=255)
aTTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCTCCAGTCGTTGATCCAGGGc > 2:1721765/1‑289 (MQ=255)
ttacTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCACACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATTCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCATTAGTTGATCCAGGGCa > 1:151150/4‑289 (MQ=255)
ttGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCa < 1:213198/289‑1 (MQ=255)
ttGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTATATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCa < 1:136687/289‑1 (MQ=255)
tGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTGGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCAt < 1:1725034/289‑1 (MQ=255)
aaCGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGGATc > 1:1345316/1‑285 (MQ=255)
cGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTa > 1:983405/1‑289 (MQ=255)
cGGCTGCGGCAGGAAGGACATCAAATTGGCTAGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTAGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTa > 1:1637213/1‑289 (MQ=255)
ttGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCg < 1:203425/289‑1 (MQ=255)
aaGGTAAATTAGAAGGTTTGAATGAACAAGACAGTAAAATTGCGTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGGGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGGGAATAACCACGAATGAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTGTGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGAAAAAGTTCg < 2:1149754/287‑1 (MQ=255)
tAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTccc < 1:1837967/288‑1 (MQ=255)
tAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGcc < 2:1081694/289‑1 (MQ=255)
ggTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCa > 1:127663/1‑289 (MQ=255)
tGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAAGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATtgc < 1:1265811/289‑1 (MQ=255)
tGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACCCAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTgcg < 2:668944/289‑1 (MQ=255)
tGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTgcg < 1:555393/289‑1 (MQ=255)
ccATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCCACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑Ca > 1:1317598/1‑289 (MQ=255)
gCTGGGACAGGGCTTTGTGCGTGACCAGGTGCTCGCGGCCAACCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAg < 2:1327151/289‑1 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCTCTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCCACGCCAACAGCCACAAACTTCGCTCCCCACGCCAGGCCTTGCTGCCCCATAC‑CAGGAGCCACACCCAGAAAACCAGCCGCTTTAc > 2:1818043/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATCT‑CAGGCGCCACATCCAGAAAACCATCCGCTTTAc > 2:716830/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGCACCCCAGCCGCTTTAc > 1:251353/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTAc > 2:1181941/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTAc > 2:397892/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTCCGCCATAT‑CAGGAGCCACACCCAGAAAACCACCCCCTTTAc > 2:462970/1‑288 (MQ=255)
ggCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCCCCCCACGCCAGGCATTGCTCCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCCTTAc > 2:914712/1‑288 (MQ=255)
cTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATtgctgc < 2:226877/246‑1 (MQ=255)
tttGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCg < 1:1571160/288‑1 (MQ=255)
tCGTGACAAGGTGCTCGCGGCCACCCAGAGAAGCGAAGACGATCTGGCAGCGAATAACCACGAATTAACACAGGCCCACAGCCGATCACCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACGTCGCCAGTCGTTGAGCCAGGGCATCGAGGTAT‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCgcagca < 1:1948518/288‑1 (MQ=255)
gTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAggg < 2:510034/170‑1 (MQ=255)
gTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACgg > 2:1436045/1‑289 (MQ=255)
gTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCCCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGACACAGCCAGAAAACCCACCGCTTTACCCGCAGCACgg > 2:754946/1‑289 (MQ=255)
gTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCAT‑GGCCCTTGAA‑ATCAATAACTTACATTTTAT‑CGTGGCCCCATTTTTCCCGGTTTT‑CACAATGCCAGTCCCTTGCCCAGGGCCACACTTTAGAAGCATCGTGCAACCGCCAAGA‑CGACAGAGCTTCCTCCCCCCTGCCGGCCTTGCCGCCCCCAATCCAGTACCCACGTCAGGAAACCCGGCCGCTTTCCCTGCAGCAggg > 2:929700/1‑289 (MQ=255)
aCCAGGGGCTGGCGGCCCCCAAGCTAAGCGAAGCCGACCTGGCAGCGAATAACCACTAATTAACCCAGGCCCACAGCCGATCCCCATGGTCCTTTGAT‑ATAAATAAC‑TACCTTTTAGGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGAt < 2:1318438/288‑1 (MQ=255)
gTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCCCCATAC‑CAGGAGCCACAGCCAGAAAACCAGCCGCCTTACCCCCAGCCCGGATccgcc > 2:150/1‑288 (MQ=255)
tGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGATCCACAGCCAGAAAACCAGCCGCTTTACCCGCACCACGGATccgccca > 2:1576390/1‑287 (MQ=255)
cgcgGCCACCCAACTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAAt > 1:963347/1‑287 (MQ=255)
tAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCaata < 1:1307622/286‑1 (MQ=255)
gAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTg < 1:508255/289‑1 (MQ=255)
ccGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCAc > 2:1633599/1‑288 (MQ=255)
aTCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATc < 2:940058/148‑1 (MQ=255)
tCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCg > 2:1113888/1‑289 (MQ=255)
tCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCACCCCGGATCCGCCCAATACTGGTTCCAATAATTCGCTGCACTTCCg > 2:1881642/1‑289 (MQ=255)
gAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCgg < 1:1576390/289‑1 (MQ=255)
aaTAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATCAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGAGACAGTTCGCTCCACACGCCCGGCATTGCTGCGCCATAG‑CAGGAGCCACAGCCAGAAAACCAGCCGCATTACCCGCAGCCCGGAACCGCCGAAAACTGGTTTCCATAATTCGCTGCCCATCCGGGTGCCCGGc > 2:1694309/1‑289 (MQ=255)
ccACTAATTGACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTAt < 2:297490/289‑1 (MQ=255)
ccACTAATTAACACAGGCCAGCGGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTAt < 2:1620277/289‑1 (MQ=255)
attaagacgcgcccccCAGCTGATCACAATGGTCCTTTGATCACAAATCCC‑TA‑CTTTTCACCGTGG‑CCCATTTTTGCCGCATTTACGCATGTCCAGTCATGAGCCCAGGGCACCGCTGTAG‑GGCTTCGTGTCAACCCCAACAGCGACAAAGTTGGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTGACCCGCAGCACGGATCCGCCGAATACTGGTGTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCggg < 2:360246/277‑1 (MQ=255)
aaTTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCggg < 2:127663/289‑1 (MQ=255)
cacaGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAAAACGGGTTTCAATAATTCGCTGCACTGCCGGGTGCCCGGCGTTATCCGGGTAGccc > 1:360246/1‑289 (MQ=255)
aGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaac > 1:1354289/1‑288 (MQ=255)
aGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaac > 1:728287/1‑288 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGcc < 1:1409556/127‑1 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGcc > 2:1409556/1‑127 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCat < 1:1525312/172‑1 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CCGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTACGGGCGCCCGGCGTTATCCGGGTACCCCaacg > 2:1886713/1‑286 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGCAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACCGGTTTCAATAATTCGCTGCACCTCCGGGTGCCCGGCGTTAGCCGGGTCGCCCaacg > 2:192939/1‑286 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCgcagca < 1:1461313/215‑1 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCgcagca > 2:1461313/1‑215 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacg > 1:1182662/1‑286 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacg > 1:176817/1‑286 (MQ=255)
gCCCACAGCCGATCCCCATGGGCCTTTGAG‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCTACGCCAACAGCGACAAAGTTCGCTCACAACGACAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTCACCCGCAGCAAGGATCCGCCGAACAAGGGTCTCAATAATTCACTGCGACTCAGGGCGCCAGGCGTTACCCGGGtcaccaaacca > 2:1572149/1‑279 (MQ=255)
cccACAGCCGATCCCCATGGGCCCTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgac < 1:1818043/289‑5 (MQ=255)
ccACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgac > 2:1053074/1‑284 (MQ=255)
acaGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGCTTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCCTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgacgca > 1:764224/1‑282 (MQ=255)
caGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgacgcag > 1:188540/1‑281 (MQ=255)
aTCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGa > 1:1670545/1‑288 (MQ=255)
tCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCATAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGAt > 2:252674/1‑288 (MQ=255)
tCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCg > 2:1413105/1‑264 (MQ=255)
tCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCg < 1:1413105/264‑1 (MQ=255)
cccATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCg < 1:1381878/289‑1 (MQ=255)
ccATGGGCCTTGGAT‑ATCAATAGC‑TCCCTTTTATGCGTGG‑CCCATTTTTTCCTGATTTAAACAGCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGGGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGc < 2:963347/289‑1 (MQ=255)
cATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCAt < 2:1383071/86‑1 (MQ=255)
ccTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCa > 2:184867/1‑289 (MQ=255)
cTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCaa > 1:422401/1‑289 (MQ=255)
ttGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGCCGCAGAAAGATCCGCAGGTCCAATa > 2:1121041/1‑289 (MQ=255)
tGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGc > 1:456015/1‑242 (MQ=255)
taacAATTAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTGAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAaca < 2:1350146/286‑1 (MQ=255)
atCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAacac < 1:777931/289‑1 (MQ=255)
atCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAaca > 1:21169/1‑288 (MQ=255)
tCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACg < 1:563098/289‑1 (MQ=255)
tCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGGAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAacac > 1:1094183/1‑288 (MQ=255)
tAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAACCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTGATCCGGGTAGCCCAACGACGCAGACAGATCCGCAGGTCCAATAAAAAccccct > 2:683179/1‑287 (MQ=255)
tAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCggg < 2:1283173/243‑1 (MQ=255)
tAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCa > 1:767667/1‑288 (MQ=255)
c‑TACCTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCCGGTCCAATAAACACGCCATCaa > 2:1256200/1‑289 (MQ=255)
ccTTTTATGCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATc > 2:1027715/1‑288 (MQ=255)
gCGTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACg > 1:936731/1‑289 (MQ=255)
gTGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCTTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGt > 2:56749/1‑288 (MQ=255)
tGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgacgca > 2:836905/1‑234 (MQ=255)
tGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCaacgacgca < 1:836905/241‑8 (MQ=255)
tGG‑CCCATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCg > 1:409587/1‑289 (MQ=255)
cccATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATccg < 2:376380/168‑1 (MQ=255)
cATTTTTGCCTGATTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGAt < 1:806641/289‑1 (MQ=255)
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ATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGAT‑ATCAATAAC‑TACCTTTTATGCGTGG‑CCCATTTTTGCCACTTTTAAACATCGCCAGTCGTTGATCCAGGGCATCGCTGTAG‑AGCATCGTGTCAACGCCAACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATAT‑CAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAAGCTCGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGAT > CP042583/1929058‑1929615
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
