Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,962,947 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,962,9470GC99.1% 538.6 / NA 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (124/104);  total (124/106)
Fisher's exact test for biased strand distribution p-value = 2.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,962,9480CG98.7% 520.0 / ‑4.0 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (121/103);  minor base A (1/2);  total (124/106)
Fisher's exact test for biased strand distribution p-value = 5.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,962,9490TA99.1% 536.3 / NA 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (123/104);  minor base C (1/1);  total (124/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 230 total aligned reads displayed.

GAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGGCTGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGGCTCATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGGCTATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGGCTCAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCGGGT  >  CP042583/1962672‑1963228
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                       
       tagcgtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACAAGCAACAGGATCATAAACACCTCACGCAGCGACATCCCAGGCAGTTCctg                                                                                                                                                                                                                                                                       >  1:968260/1‑289 (MQ=255)
                    aTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTg                                                                                                                                                                                                                                                           >  2:1879073/1‑288 (MQ=255)
                             tCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATCTTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGAGCATAAACAGCACACGCAGCGACAGCCCCGGCAGTCCCTGGCTGGACATCTGCCTTCTCGCt                                                                                                                                                                                                                                                 >  2:1401133/1‑289 (MQ=255)
                              cGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGCACCTGGCTGGCAATCTGGCTTTCCGCtt                                                                                                                                                                                                                                                >  2:648717/1‑289 (MQ=255)
                                 cACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTAc                                                                                                                                                                                                                                             <  1:25824/289‑1 (MQ=255)
                                           agagCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCACCAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgc                                                                                                                                                                                                                                   >  1:1894281/1‑289 (MQ=255)
                                             ggCATCACCACCAGCCCCGTGCAGCCGACGATCAGGAACGGTAGCAGTGCGATTAG‑GTTTTGTGGAGTTATTGGCATGGCGATTTACGGGCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                                                                                                                  <  2:126640/287‑1 (MQ=255)
                                             ggCATCACACCCACCCCCGGCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                                                                                                                  <  2:555251/287‑1 (MQ=255)
                                              gCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                                                                                                                  <  1:1581793/287‑1 (MQ=255)
                                               cATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACCAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCt                                                                                                                                                                                                                                                 <  1:695461/271‑1 (MQ=255)
                                               cATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCCCGa                                                                                                                                                                                                                               >  1:173646/1‑289 (MQ=255)
                                                       ccaccaccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACa                                                                                                                                                                                                                        >  1:882816/1‑288 (MQ=255)
                                                         accaccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGCCATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACAta                                                                                                                                                                                                                      >  1:1456539/1‑287 (MQ=255)
                                                           caccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGcc                                                                                                                                                                                                                   <  1:513342/289‑1 (MQ=255)
                                                           caccGTCAAGACGACGATCAGGAACGGTAGAAGTGCGATGAG‑GTTTTGTGTAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGACGCCCAGCAGTACCAGCAGCACCACCAGCAACAAGATCATAAACAGCTCACGCAGCGAAATCCCTGGCAGTTCCTGGCTGGCAAGCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGcc                                                                                                                                                                                                                   <  2:1583004/289‑1 (MQ=255)
                                                                      cgacgaGAAGCAACGGTGGCAGTTGGTTCAT‑GTTTTTGTGAGTTATGTTCATGGCGATTTACGGCCTGGTAGTAGTAACGGAATTAACAAACCACTGCTGGGTATTGCCAATCGCGGAGTGCGAGGTCTCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAAc                                                                                                                                                                                                        <  2:1452770/289‑1 (MQ=255)
                                                                        cagatgaggagcGGTAGCAGTTCTGTATG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCAATGCTGGATATTGACAATCGCGGAGTGCGAGATATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACCGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACa                                                                                                                                                                                                       <  2:200952/277‑1 (MQ=255)
                                                                        acgaTCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCTATGTAACATCCCCCGCGAATAAACAg                                                                                                                                                                                                      >  2:527335/1‑289 (MQ=255)
                                                                          taTCGGCAACGGTGAGTGTGCGATAAGAGTTTTG‑GGAATTAGTGACAGGGCGTTTTGAGGCCTTGTAATAGTAACGGAATTAACAGACCACTGCTGGATATTGCCAATGGCGGACTGCGAGGTATCCAGAATCGGCTGCGCATAGAAGCCCAGCAGTACCAGCAGCATCACCAGCAATAGGATCATAAACAGCTCACGCAGCGACATCCCTCGCAGTTCCTGGGTGGCACTCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACa                                                                                                                                                                                                       <  2:48696/285‑1 (MQ=255)
                                                                                  aCGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGAc                                                                                                                                                                                            <  1:384407/289‑1 (MQ=255)
                                                                                      tAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAg                                                                                                                                                                                         >  2:1790371/1‑288 (MQ=255)
                                                                                       aGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGcc                                                                                                                                                                                       <  1:1009064/289‑1 (MQ=255)
                                                                                          atggggATAAG‑GTTTAGAGGAGTTATTGTCATGGGGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAAGCAGTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCACAGCAGTAGCAGCAGCACCACCAGCAACAGGATCATAAACGGCTCACGCAGGGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCGTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                                                                                                     <  2:1867262/283‑1 (MQ=255)
                                                                                          aGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                                                                                                                  <  1:573381/243‑1 (MQ=255)
                                                                                          aGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                                                                                                                  >  2:573381/1‑243 (MQ=255)
                                                                                              cGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGt                                                                                                                                                                                >  1:1832457/1‑289 (MQ=255)
                                                                                              cGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGt                                                                                                                                                                                >  1:1879282/1‑289 (MQ=255)
                                                                                              cGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGGAAGCTCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGCACAGCCAAAAgga                                                                                                                                                                                >  2:420423/1‑288 (MQ=255)
                                                                                               gATTAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGt                                                                                                                                                                                <  1:1151695/288‑1 (MQ=255)
                                                                                               gATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGt                                                                                                                                                                                <  1:1432566/288‑1 (MQ=255)
                                                                                                    g‑gTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAgaga                                                                                                                                                                           <  2:1322427/288‑1 (MQ=255)
                                                                                                         ttGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACg                                                                                                                                                                      >  2:941248/1‑289 (MQ=255)
                                                                                                                        cATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTAc                                                                                                                                                        <  1:847388/288‑1 (MQ=255)
                                                                                                                           ggCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAAc                                                                                                                                                     >  1:191390/1‑288 (MQ=255)
                                                                                                                                 ttACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGAAAACGGTAATCAACGGTACAACCTGGaa                                                                                                                                               >  1:1095715/1‑288 (MQ=255)
                                                                                                                                       ccTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCg                                                                                                                                        >  1:764166/1‑289 (MQ=255)
                                                                                                                                        attGTAGTAGGAACCGAAGTAAGAAACAACTGGTGGAGAGTGCCAGTCGCGGAGGGAGAGGGATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGa                                                                                                                                       <  2:567260/288‑1 (MQ=255)
                                                                                                                                          tGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAAc                                                                                                                                     >  1:592588/1‑289 (MQ=255)
                                                                                                                                                 gtaACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCa                                                                                                                                                                                                                  <  1:675044/205‑1 (MQ=255)
                                                                                                                                                 gtaACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCa                                                                                                                                                                                                                  >  2:675044/1‑205 (MQ=255)
                                                                                                                                                    aCGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCCACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTCCGCTTTACCGAAGTAAGCGCGATGCAACATCGCCAGCGAATAACCCGATGCAACGACCACCCCAAAGGCAGAGATCACGGTAATCCCCGGTACAACCTGGCAGCTGCCGCACAGAATCATac                                                                                                                           >  2:1460086/1‑288 (MQ=255)
                                                                                                                                                    aCGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATaa                                                                                                                           >  1:280990/1‑289 (MQ=255)
                                                                                                                                                    aCGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGAGAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATaa                                                                                                                           >  2:80629/1‑289 (MQ=255)
                                                                                                                                                      ggAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAAt                                                                                                                         >  1:1205727/1‑289 (MQ=255)
                                                                                                                                                          ttAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCg                                                                                                                      >  1:1791841/1‑288 (MQ=255)
                                                                                                                                                                aaCCACTGCTGGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCcgacga                                                                                                               >  1:1064544/1‑289 (MQ=255)
                                                                                                                                                                      tgctgGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAAAAGCCCAGCAGTACCAGCAGAACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTAc                                                                                                         <  2:778165/289‑1 (MQ=255)
                                                                                                                                                                       gctgGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTAcc                                                                                                        >  1:1596636/1‑289 (MQ=255)
                                                                                                                                                                        ctgGATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGAc                                                                                                                                                                                            <  1:1669515/204‑1 (MQ=255)
                                                                                                                                                                           gATATTGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGt                                                                                                     >  1:1271396/1‑288 (MQ=255)
                                                                                                                                                                               ttGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAg                                                                                                <  1:1793170/289‑1 (MQ=255)
                                                                                                                                                                                tGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAg                                                                                                >  2:1272930/1‑288 (MQ=255)
                                                                                                                                                                                tGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAg                                                                                                >  2:920537/1‑288 (MQ=255)
                                                                                                                                                                                tGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAg                                                                                                >  1:1279483/1‑288 (MQ=255)
                                                                                                                                                                                tGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAg                                                                                                >  1:1868623/1‑288 (MQ=255)
                                                                                                                                                                                tGCCAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGGGCCAg                                                                                                >  1:1309284/1‑288 (MQ=255)
                                                                                                                                                                                  ccAATCGCGGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCCAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATACACAGACCAGCCCAAAGGCAGAGATAACGGGTATCACCGGTACAAACTGGCAGCTCCCGTACAGGACCATAATATCCACGACTAAGTAACCGGTGCCaaga                                                                                              >  2:1825518/1‑285 (MQ=255)
                                                                                                                                                                                       cgcgGAGTGCGAGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                                                                                                     >  1:92415/1‑196 (MQ=255)
                                                                                                                                                                                                cgaggTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGc                                                                                <  1:522213/285‑1 (MQ=255)
                                                                                                                                                                                                 gaggTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCa                                                                              <  1:322035/287‑1 (MQ=255)
                                                                                                                                                                                                  aggTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCa                                                                              <  2:280990/287‑1 (MQ=255)
                                                                                                                                                                                                      agccAGAATCGGCTGCGGAGAGAAGCCCAGCAGTACCAGCAGCACCCCCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCCATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGACGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCAACCGCa                                                                         <  2:1673530/287‑1 (MQ=255)
                                                                                                                                                                                                       tCCAGCATCGGCTTCGGATAGCAGCCCAGCAGTACCATCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGCCATCCCTGGCAGTTCCTGGCTCGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATACGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCaa                                                                        <  1:47687/289‑1 (MQ=255)
                                                                                                                                                                                                       accACAAGCGGCTGAGGATACAAGCCCACACGTACACGCACCACCCCCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCaa                                                                        <  2:1194647/288‑1 (MQ=255)
                                                                                                                                                                                                        ccAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCaaa                                                                       >  2:696048/1‑289 (MQ=255)
                                                                                                                                                                                                        ccAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCaaa                                                                       >  1:1059103/1‑289 (MQ=255)
                                                                                                                                                                                                                 gCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAgcg                                                               >  1:756880/1‑286 (MQ=255)
                                                                                                                                                                                                                 gCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCACTGGCAGTGCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAACGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAgcg                                                               >  1:431934/1‑286 (MQ=255)
                                                                                                                                                                                                                     cGGATAGAAGCCCAGCAGTACCGTCGGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCTACATCCCTGGCAGTGCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAgcgacag                                                           <  2:1028764/288‑7 (MQ=255)
                                                                                                                                                                                                                         tAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCt                                                       <  1:1477640/288‑1 (MQ=255)
                                                                                                                                                                                                                          aGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTgg                                                     <  1:1687740/289‑1 (MQ=255)
                                                                                                                                                                                                                                  agcagTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTTCCAGGCATCCCAAGCGTTGCCACCGCAAAGCACAGCGCAACTCCTGGCAGCCAtt                                             >  2:1669486/1‑289 (MQ=255)
                                                                                                                                                                                                                                      gTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCa                                                   <  1:621399/279‑1 (MQ=255)
                                                                                                                                                                                                                                        acccacaacaccacCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATc                                        <  2:1794305/280‑1 (MQ=255)
                                                                                                                                                                                                                                         ccAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCtt                                      <  2:756880/289‑1 (MQ=255)
                                                                                                                                                                                                                                              agcaCCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTc                                  >  1:1038174/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 accaccAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAACGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTGGCCGACGAAGGTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAAAAGCAACAGTGATGCTAGCCATTCCATCGTCCTCcaca                              >  2:112655/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 accaccAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCa                                                                                                                                                               <  1:1518410/160‑1 (MQ=255)
                                                                                                                                                                                                                                                 accaccAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTcc                                 <  1:941248/286‑1 (MQ=255)
                                                                                                                                                                                                                                                 accaccAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATAGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCa                                                                                                                                                               >  2:1518410/1‑160 (MQ=255)
                                                                                                                                                                                                                                                 aacaccaGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGCCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCcaca                              >  1:1502899/3‑289 (MQ=255)
                                                                                                                                                                                                                                                             aGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATAATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCCCCACAACCCGCCcatca                  >  2:1634200/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATgcg              <  1:1401133/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCAt           >  1:36121/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          gCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCAACCTGCCCATGTagcg     >  2:1887719/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTAc                                                                                                                                                                                                                                             <  1:751457/56‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAgaga                                                                                                                                                                           <  1:974472/122‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTa                                                                                                                                                                   >  2:1570015/1‑130 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTa                                                                                                                                                                   <  1:1570015/130‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATACATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCAACGCAAAGCACAGCCACCGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCCCCCATCCAGCCCATTCCGCgg    >  2:964170/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCCTCTTGCTCCACCACCCGCCCATCATGCCCATCACGCgg    >  2:1719265/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCgg    >  1:1759564/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCgg    >  1:707439/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCgg    >  2:1086456/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCgg    >  1:1506295/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCgg    >  2:1280520/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCAGCATGCCCATGCcgccg    >  2:604274/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                            tcccGCAGCGTCATCCCTGGCCGTTCCTGGCTGGAAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTcgc      <  2:360426/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTcgc      <  1:565909/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGCGACAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCCCCTGTCCTGGGt  >  2:711473/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                       
GAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAG‑GTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGGCTGGTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGGCTCATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGGCTATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAAGCGTTGCCACCGCAAAGAACAGGCTCAGTGCTGGCAGCCATTTCATCTTGCTCCACAGACCGCCCATCATGCGCATGTCGCGGGT  >  CP042583/1962672‑1963228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A