Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F210 I1 R1
|
4928 |
368.7 |
6392010 |
97.5% |
6232209 |
231.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
551,611 |
6 bp→TCATCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 551,611 | 0 | A | T | 99.8%
| 981.4
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (192/212); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 551,612 | 0 | G | C | 99.5%
| 965.9
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (191/212); minor base T (2/0); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 2.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 551,613 | 0 | T | A | 99.5%
| 977.3
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base A (192/212); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 2.28e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 551,614 | 0 | A | T | 99.5%
| 972.4
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base T (192/211); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 551,615 | 0 | G | C | 99.8%
| 962.6
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (192/212); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 551,616 | 0 | C | G | 99.5%
| 971.6
/ NA
| 406 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base G (191/212); total (194/212) |
| Fisher's exact test for biased strand distribution p-value = 2.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 406 total aligned reads displayed.
ATGGAGGAGATTGATGAATTACGCTGGAGCCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGAGTAGC‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGAGTTGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGGCGCGAGTATCCCTC > CP042583/551344‑551879
||||||
tGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACAATCGATTTTTACCAAATGTTCGCTCGGTTTTGG‑TTATCGCATCCACAATGGTTgcc > 2:2619491/1‑287 (MQ=255)
ggaggaGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACa < 1:2564846/289‑1 (MQ=255)
tgatgaATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTa > 2:1039918/1‑289 (MQ=255)
tgaATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAgc > 1:600200/1‑288 (MQ=255)
gtcgcTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa > 1:1121839/5‑289 (MQ=255)
gtcgcTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa > 1:1592702/5‑289 (MQ=255)
tcgcTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa < 2:598774/285‑1 (MQ=255)
tgtgCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGa < 1:2361495/288‑1 (MQ=255)
tCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTAtt < 2:698336/258‑1 (MQ=255)
tCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTAtt > 1:698336/1‑258 (MQ=255)
gCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCgatg < 1:2483027/289‑1 (MQ=255)
ccATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGGCGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCgatga > 2:1161162/1‑289 (MQ=255)
aTGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGatgatg < 1:2594937/289‑1 (MQ=255)
aTTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCa > 2:570692/1‑247 (MQ=255)
aTTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAg > 2:2990092/1‑289 (MQ=255)
tCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTg < 1:2210155/225‑1 (MQ=255)
tCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTg > 2:2210155/1‑225 (MQ=255)
ttCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTAc < 1:1228180/289‑1 (MQ=255)
cGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACt > 1:1939427/1‑288 (MQ=255)
aGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCga > 2:264372/1‑259 (MQ=255)
tGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTAc < 1:1013207/283‑1 (MQ=255)
cGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTgg > 1:1956972/1‑289 (MQ=255)
cGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTgg > 2:1221724/1‑289 (MQ=255)
tggtgTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGt < 1:30486/288‑1 (MQ=255)
gggtgTTATAAGAAGAAGAATGGCGGTGGTTAAAGGAGGAAAA‑AACGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGta < 1:792756/287‑1 (MQ=255)
ttaGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCaa < 1:344495/253‑1 (MQ=255)
ttaGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAg < 1:2088340/289‑1 (MQ=255)
ttaGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAg < 2:1095443/289‑1 (MQ=255)
aGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGt < 1:2520219/289‑1 (MQ=255)
aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACCTTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGAGGATGCCAAACTGCACAGAAATTTACTCCGCTGGTATAGCTCAGGTCg > 2:936038/1‑288 (MQ=255)
aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc > 1:2633882/1‑271 (MQ=255)
aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc > 1:201139/1‑271 (MQ=255)
aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCg > 2:1865219/1‑288 (MQ=255)
aaaGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATCATGCAAAACTGAACAGAAATTTACTCTGCTGGTCTAGCGCAGGTCGcat > 2:2286205/1‑287 (MQ=255)
ttGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGa < 2:1956972/287‑1 (MQ=255)
gtggtTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTAtt < 2:2433678/197‑1 (MQ=255)
gtTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGc > 1:2044860/1‑182 (MQ=255)
ttACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGa > 2:321657/1‑287 (MQ=255)
tACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc > 1:2617091/1‑254 (MQ=255)
aggaggAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCga > 2:2577905/1‑220 (MQ=255)
gaAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGAtt > 1:2299232/1‑289 (MQ=255)
gaAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGAtt > 1:496794/1‑289 (MQ=255)
aaaaTACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa > 1:2849650/1‑200 (MQ=255)
tACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGc > 1:1706265/1‑288 (MQ=255)
cGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGca < 1:460125/222‑1 (MQ=255)
cGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGca > 2:460125/1‑222 (MQ=255)
cGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACtt < 1:3191941/274‑1 (MQ=255)
ggggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCag > 2:1781081/1‑288 (MQ=255)
gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGc > 2:3076489/1‑162 (MQ=255)
gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTAc > 2:1019280/1‑231 (MQ=255)
gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCagtc > 1:1402149/1‑287 (MQ=255)
gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCagtc > 2:1528400/1‑287 (MQ=255)
tAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCagtcatggcg < 2:1449290/289‑9 (MQ=255)
tAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCagtcatggcg < 1:910995/289‑9 (MQ=255)
aGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCgg < 2:1304369/289‑1 (MQ=255)
gaagaagaaCTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGaaa < 1:1327930/289‑1 (MQ=255)
agaagaaCTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGACTTCCCCGAACTTCGGGATTACGCCCagtatggggggggaca > 2:73802/1‑274 (MQ=255)
aTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTAtt > 1:1282884/1‑149 (MQ=255)
cTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc > 2:547967/1‑208 (MQ=255)
cTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGaa > 2:783828/1‑289 (MQ=255)
ttATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATg < 1:1528400/289‑1 (MQ=255)
ttATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATg < 1:758121/289‑1 (MQ=255)
tatGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATgcgc < 1:1781081/289‑1 (MQ=255)
tatGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATgcgc < 1:1865219/289‑1 (MQ=255)
atGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGcc < 2:345086/289‑1 (MQ=255)
gCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc > 1:1035376/1‑198 (MQ=255)
tGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTAtt > 2:2383586/1‑131 (MQ=255)
tGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAg < 1:1084166/206‑1 (MQ=255)
tGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTtattat > 2:2094462/1‑289 (MQ=255)
aTGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCGAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACgcgc < 1:2917297/288‑1 (MQ=255)
tGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCaa < 2:1592702/289‑1 (MQ=255)
ttAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGt < 2:1701649/289‑1 (MQ=255)
ccAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAgg > 1:3118352/1‑184 (MQ=255)
ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGta > 1:1740856/1‑166 (MQ=255)
ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGta < 2:1740856/166‑1 (MQ=255)
ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAg > 1:2703862/1‑288 (MQ=255)
ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGAAAATGAAGATGCGCCGTATTTTGAATACGCGCAACGCGACTATTGTGGAGAAgg > 2:847472/1‑289 (MQ=255)
tCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTAc < 2:2909527/155‑1 (MQ=255)
tCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGcc > 1:562774/1‑208 (MQ=255)
tGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAgcg < 1:1187694/101‑1 (MQ=255)
cATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAAAGAAGATGCCCCTTATTATGCATATGCCCAACGCGGTCATTGTGGAGAATGCGaaa > 2:2321848/1‑289 (MQ=255)
aTCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGAt > 2:2539659/1‑239 (MQ=255)
gCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGcaca < 1:1639648/137‑1 (MQ=255)
gCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGa < 2:1253180/225‑1 (MQ=255)
gCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGcc > 2:295848/1‑240 (MQ=255)
gCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCtta > 1:2400876/1‑243 (MQ=255)
gCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGgag > 1:2967535/1‑275 (MQ=255)
cccGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAAcgc > 2:2028564/1‑261 (MQ=255)
cGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACgcgc > 2:1625941/1‑254 (MQ=255)
ttGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGt > 2:2857432/1‑150 (MQ=255)
tGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCa < 1:73802/289‑1 (MQ=255)
tGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGGAACTGAACCGGATAATGAAGATGCGCCTTATTATGAATCACCGCAACGCGTCTTTTTGGGAGAAGGCGAAAGCCTTGTGGCAGAACt > 2:2713995/1‑289 (MQ=255)
tGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAAcc < 2:1336280/211‑1 (MQ=255)
tGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACt > 1:862899/1‑289 (MQ=255)
tCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGTTTAA‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGta > 2:2006002/1‑130 (MQ=255)
tCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACtt < 2:312220/161‑1 (MQ=255)
tCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGcc > 2:1653059/1‑214 (MQ=255)
cGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGgcgc < 1:1440757/289‑1 (MQ=255)
tttACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCAAAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGGCGCGAGTa < 2:1403593/289‑1 (MQ=255)
tACCAAATGTTCGCTCGGATTTGGTCATCG‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAgg < 2:1930209/131‑1 (MQ=255)
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ATGGAGGAGATTGATGAATTACGCTGGAGCCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGAGTAGC‑CATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTAT‑CCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGAGTTGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGGCGCGAGTATCCCTC > CP042583/551344‑551879
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
