Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 656,494 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583656,4940GC100.0% 654.8 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (134/139);  total (134/139)
*CP042583656,4950CG99.6% 644.7 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (133/139);  minor base T (1/0);  total (134/139)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583656,4960TA99.6% 642.1 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (132/139);  minor base C (1/0);  total (134/139)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 273 total aligned reads displayed.

GTATTTAAAGCGTCGGTCGAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCGCTTTTCCCGCTTCCATTGCTACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAAGCTAC‑TCATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCAT  >  CP042583/656218‑656772
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                     
gTATTTAAAGCGTCGGTCGAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCt                                                                                                                                                                                                                                                                              <  2:627280/288‑1 (MQ=255)
           gtcggtcgAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCAttcgaacc                                                                                                                                                                                                                                                                  >  2:2170518/1‑283 (MQ=255)
            tcggtcgAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGCAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCAttcgaacc                                                                                                                                                                                                                                                                  >  2:1940920/1‑282 (MQ=255)
             cggtcgAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCAttcgaaccg                                                                                                                                                                                                                                                                 >  1:1860465/1‑281 (MQ=255)
                 cgggggggggggTAATACCGACCGGTTGCGCCAGTTGCAGGCAACGCGGTGCATCCTTTCTTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACaa                                                                                                                                                                                                                                                             <  2:3152916/282‑1 (MQ=255)
                  gaggagGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACaaa                                                                                                                                                                                                                                                            <  2:223729/288‑1 (MQ=255)
                    ggggggCGGTAATCCCGAACTGCTGCGCCCGTTGCATGAAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGTGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACg                                                                                                                                                                                                                                                          <  2:1894917/285‑1 (MQ=255)
                      ggggCGGTAATACCGAACTGCTGCGCCAGTTGCATGCCACCCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGcc                                                                                                                                                                                                                                                        <  1:2531486/287‑1 (MQ=255)
                          cGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGcc                                                                                                                                                                                                                                                        >  1:2357712/1‑284 (MQ=255)
                           gatAATACCGAACTGCTGCGCCATTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACaaa                                                                                                                                                                                                                                                            <  1:417166/277‑1 (MQ=255)
                                tACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCAcc                                                                                                                                                                                                                                             <  1:294254/289‑1 (MQ=255)
                                           tgcGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACg                                                                                                                                                                                                                                  <  1:705030/289‑1 (MQ=255)
                                                    tgcatgcaACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAg                                                                                                                                                                                                                         <  1:2763620/289‑1 (MQ=255)
                                                            aCGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGc                                                                                                                                                                                                                 >  2:1014170/1‑289 (MQ=255)
                                                             cgcgGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGCCAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCa                                                                                                                                                                                                                >  1:2288272/1‑289 (MQ=255)
                                                             cgcgGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCa                                                                                                                                                                                                                <  1:463681/289‑1 (MQ=255)
                                                              gcgGTGCATCCTTTACTTCATCCTGAATGTTCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTAGCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAg                                                                                                                                                                                                               <  1:1222379/289‑1 (MQ=255)
                                                              gcgGTGCATCCTTTACTTCATCCTGAATGATCTCGGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAg                                                                                                                                                                                                               <  1:941902/289‑1 (MQ=255)
                                                              gcgGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAg                                                                                                                                                                                                               <  1:1157115/289‑1 (MQ=255)
                                                                       ccTTTACTTCATCCTGAATGTTCTCAGCGGTACTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGTTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTtgt                                                                                                                                                                                                      <  2:1653018/289‑1 (MQ=255)
                                                                           tACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTACGCTGCCATTCGTCGCTGCCGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCTGCTTCCATTCGCACCCACAAACGCCCAAATATCACGCGCGTTTACAGTTAGCTGAGGCAATGGCACCGCTTTTgtgtg                                                                                                                                                                                                   >  2:1132262/1‑287 (MQ=255)
                                                                                 aTCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAg                                                                                                                                                                                             >  1:292680/1‑288 (MQ=255)
                                                                                 aTCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAg                                                                                                                                                                                             >  1:1086526/1‑288 (MQ=255)
                                                                                  tCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGcc                                                                                                                                                                                                                                                        >  2:711629/1‑228 (MQ=255)
                                                                                  tCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCcg                                                                                                                                                                                                                                           <  1:857771/241‑1 (MQ=255)
                                                                                  tCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCcg                                                                                                                                                                                                                                           >  2:857771/1‑241 (MQ=255)
                                                                                       aaTGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAAc                                                                                                                                                                                      >  1:602293/1‑289 (MQ=255)
                                                                                       aaTGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACCTTAGCTGAGGCAATTTCAGCGTTATTGTGTCGCTAAGACGAAAc                                                                                                                                                                                      >  2:96897/1‑289 (MQ=255)
                                                                                            tctcAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTTTGTCCCTAAGACGAAACggt                                                                                                                                                                                   >  2:2629852/1‑285 (MQ=255)
                                                                                                 gCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCa                                                                                                                                                                            >  1:1274473/1‑289 (MQ=255)
                                                                                                     tAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGCTTTCCCGCTTCCCTTCGAACCGACCAACGCCCAACTATCACCCGCCTTTAACGTTTGCTTAGGCCATTGCAGCGTTTTTTTGTCCCGAAGACCAAACGTGCCttcaaacat                                                                                                                                                                        >  2:2435470/1‑282 (MQ=255)
                                                                                                     tAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAAt                                                                                                                                                                        >  1:2786332/1‑289 (MQ=255)
                                                                                                        tGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCAcc                                                                                                                                                                                                                                             >  2:3189140/1‑217 (MQ=255)
                                                                                                        tGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAAttt                                                                                                                                                                      <  2:2387289/288‑1 (MQ=255)
                                                                                                          cGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCa                                                                                                                                                                   >  2:2006580/1‑289 (MQ=255)
                                                                                                            tCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGttt                                                                                                                                                                                                                                      <  1:1108140/220‑1 (MQ=255)
                                                                                                            tCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaac                                                                                                                                                                 >  2:1264086/1‑288 (MQ=255)
                                                                                                               ggTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgat                                                                                                                                                              <  1:1550458/289‑5 (MQ=255)
                                                                                                                 tgtCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgatg                                                                                                                                                             <  1:2668422/288‑6 (MQ=255)
                                                                                                                 tgtCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgatg                                                                                                                                                             <  2:2084053/288‑6 (MQ=255)
                                                                                                                  gtCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgatgac                                                                                                                                                           <  2:1037560/289‑8 (MQ=255)
                                                                                                                    cATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgatgacat                                                                                                                                                         >  1:2563741/1‑280 (MQ=255)
                                                                                                                                  ccGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACt                                                                                                                                           <  2:471865/288‑1 (MQ=255)
                                                                                                                                     aGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAAc                                                                                                                                                                                                                                   >  2:2518272/1‑198 (MQ=255)
                                                                                                                                         tatCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAg                                                                                                                                   <  2:1798204/289‑1 (MQ=255)
                                                                                                                                           tCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACaa                                                                                                                                                                                                                                                             <  1:1167077/166‑1 (MQ=255)
                                                                                                                                           tCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACaa                                                                                                                                                                                                                                                             >  2:1167077/1‑166 (MQ=255)
                                                                                                                                            cGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGcc                                                                                                                                                                                                                                                        >  1:3172998/1‑170 (MQ=255)
                                                                                                                                            cGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAgg                                                                                                                                                                                                                        <  1:878479/202‑1 (MQ=255)
                                                                                                                                            cGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGa                                                                                                                                >  1:2773991/1‑289 (MQ=255)
                                                                                                                                                 ttATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGttt                                                                                                                                                                                                          <  1:1590917/211‑1 (MQ=255)
                                                                                                                                                   cttcccgtGCCATTGGTCGTGGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGa                                                                                                                         <  2:1163086/282‑1 (MQ=255)
                                                                                                                                                   agtcagatggcttccgtggCTGACGAGTTTTTGCAATTGGTCGAAGGAGGGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGa                                                                                                                         <  2:1316138/275‑1 (MQ=255)
                                                                                                                                                    ttCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGt                                                                                                                                                                                                                                        <  2:1523324/178‑1 (MQ=255)
                                                                                                                                                    ttCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCACTTTCAGCGTTTTGGTGTCGATAAGACGAAACCGTCCTTGCAAAATTTTCAACCATT‑ACCTTTTATACCCCACTTTGTGCCGCGATTACGGAc                                                                                                                        >  2:1721100/1‑289 (MQ=255)
                                                                                                                                                     tCCGCGGCCATTCGTTGCTGACGAGTTTTTGCAATTGCTGGAAGGAGAGACGAGGGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACa                                                                                                                       <  2:2813028/289‑1 (MQ=255)
                                                                                                                                                       cgttGCCGTTCGTCGGGGAGGGGTTTTGTCAGTTGGTCGAAGGTGAGTGGGGGGGTGTGGTAAACCTGGCTTTGCCGTGCACCTTTTCAAAGCGGGAGTTGCCCCGCCGTCGGCCGGGCCAGGGCCGATTTCACGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGTGGCAATTGGAGTGTTTTTGTTTCTCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAgg                                                                                                                     <  2:1447162/286‑1 (MQ=255)
                                                                                                                                                       cGCTGCCATTCGTCGCTGACGAGTGTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAgg                                                                                                                     <  1:1982388/289‑1 (MQ=255)
                                                                                                                                                         cTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCaacgatgacatt                                                                                                                                                        >  1:2714711/1‑243 (MQ=255)
                                                                                                                                                         cTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAg                                                                                                                                   <  2:2351548/273‑1 (MQ=255)
                                                                                                                                                                          cGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGcc                                                                                                                                                                                                                                                        >  2:2764363/1‑140 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGGGAGACGAGTGATGTGGGAAAACTGGCGTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  2:2153388/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAACCCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:1475352/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:1063418/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  2:1221226/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:2404055/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:2006580/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:2170518/289‑1 (MQ=255)
                                                                                                                                                                                   gCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:1708683/289‑1 (MQ=255)
                                                                                                                                                                                      aTTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACg                                                                                      <  2:1086526/289‑1 (MQ=255)
                                                                                                                                                                                      aTTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACg                                                                                      <  2:292680/289‑1 (MQ=255)
                                                                                                                                                                                        tGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCt                                                                                    <  2:537169/289‑1 (MQ=255)
                                                                                                                                                                                        tGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCt                                                                                    <  1:811147/289‑1 (MQ=255)
                                                                                                                                                                                             gAAGGAGAGACGGGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGca                                                                               <  1:2435470/289‑1 (MQ=255)
                                                                                                                                                                                               gggggacgcGAGAGATGTGGAGAGACTGGCTTTGCCGTTCACCTGTCAAAGGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGca                                                                               <  2:418936/279‑1 (MQ=255)
                                                                                                                                                                                                   gagaCGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACg                                                                                      <  1:3111494/276‑1 (MQ=255)
                                                                                                                                                                                                   cgggcgggTGATGTGGGGAGACTGGCTTCGCCGTTCTCCCATCGTAAGCGGAAGTGCCCCCGCCAGCGCGCGGGCCAGAGCCGATTTCCCGCTTCCACTCGAACCGACAAACGCCCAACTAGTACCCGCGTTGAACGTGAGCTGAGGCAATTGCAGCGTTTGTGTGTCGCTAAGACGAAACGTGCCTTGCAAAGTTTGCAACGATG‑ACATGTTATATCCCACTGTGGGCAACGATTACTGACAGGGATACGTGTTTCATAACAAAGTGTGAACACGCGTAGCAAAGCg                                                                          <  2:814628/281‑1 (MQ=255)
                                                                                                                                                                                                    agaCGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         >  1:1033751/1‑272 (MQ=255)
                                                                                                                                                                                                     gaCGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTgtgt                                                                                                                                                                                                    <  2:275316/165‑1 (MQ=255)
                                                                                                                                                                                                         aGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCAc                                                                                                                                                                                                                                              >  2:2689274/1‑119 (MQ=255)
                                                                                                                                                                                                                tgGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTg                                                                                                                                                                                   >  1:2508388/1‑171 (MQ=255)
                                                                                                                                                                                                                tgGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCAc                                                             >  2:893515/1‑288 (MQ=255)
                                                                                                                                                                                                                     aaaCTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGAc                                                                                                                        <  1:125793/224‑1 (MQ=255)
                                                                                                                                                                                                                     aaaCTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGAc                                                                                                                        <  2:2977511/224‑1 (MQ=255)
                                                                                                                                                                                                                     aaaCTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTc                                                       <  1:234828/289‑1 (MQ=255)
                                                                                                                                                                                                                        cTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGa                                                                                                                         >  1:553336/1‑220 (MQ=255)
                                                                                                                                                                                                                          ggCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACg                                                                                      >  2:565556/1‑253 (MQ=255)
                                                                                                                                                                                                                          ggCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCAt                                                  >  1:2336288/1‑289 (MQ=255)
                                                                                                                                                                                                                                   gTTCACCTTCCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAgg                                         <  1:2088414/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:1916983/238‑1 (MQ=255)
                                                                                                                                                                                                                                       aCCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGt                                     <  1:739965/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTg                                    <  1:512751/289‑1 (MQ=255)
                                                                                                                                                                                                                                           ttCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAac                                                                                         <  1:2034188/233‑1 (MQ=255)
                                                                                                                                                                                                                                                 aGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGt                           <  1:893515/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTc                                                       <  2:1558898/259‑1 (MQ=255)
                                                                                                                                                                                                                                                    ggAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTcc                         <  2:602293/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              ccGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGAc                                                                                                                        <  2:75968/183‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgcgGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAA‑CGACGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCt      >  1:1004170/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          gggCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCCCCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCTAAATTTGCAACGATG‑ACATTTTATATCCCCCTTTGTGCAGCGAGTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTATCACAGCGTGGCGATACTCACGCTGTCGGCTTTAACGTAGGCCCTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCAt  >  2:2309877/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          gggCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATG‑ACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCa   <  2:2508069/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                     
GTATTTAAAGCGTCGGTCGAGGAGGGCGGTAATACCGAACTGCTGCGCCAGTTGCATGCAACGCGGTGCATCCTTTACTTCATCCTGAATGATCTCAGCCGTAGTGCGTCCGGTGTCATCTTCGCCAGGGCCGAGCATATCGGTGTTATTCCGCTGCCATTCGTCGCTGACGAGTTTTTGCAATTGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCGCTTTTCCCGCTTCCATTGCTACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAAGCTAC‑TCATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCAT  >  CP042583/656218‑656772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A