Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F210 I1 R1
|
4928 |
368.7 |
6392010 |
97.5% |
6232209 |
231.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
667,510 |
6 bp→TCATCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 667,510 | 0 | A | T | 99.6%
| 652.7
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (145/126); total (145/128) |
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 667,511 | 0 | G | C | 100.0%
| 652.3
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (145/128); total (145/128) |
| * | CP042583 | 667,512 | 0 | T | A | 100.0%
| 656.2
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (145/128); total (145/128) |
| * | CP042583 | 667,513 | 0 | A | T | 100.0%
| 656.0
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (145/128); total (145/128) |
| * | CP042583 | 667,514 | 0 | G | C | 100.0%
| 656.0
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (145/128); total (145/128) |
| * | CP042583 | 667,515 | 0 | T | A | 99.3%
| 650.8
/ NA
| 273 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (144/127); minor base C (1/1); total (145/128) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 273 total aligned reads displayed.
CCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCAGCCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCAGCCTGGCAGTTTACCCGAGTAGTCAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGAGTGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACC > CP042583/667245‑667776
||||||
cccGAGCAACGTGTATGAAATCGACACACGCACCCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGAtctc < 1:2776588/289‑1 (MQ=255)
gCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGCCGCACGGTAAACCCAAACTCTCGATGCTGGATAAAGTGGAAAATGGTCACCTGAAAGTCCATCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAACACGTCATCGCGGCTGCGACTGCCCTGCGCGGCCCATCCTGTGGCAACGACACCTTCTCGCTGACAGTCTACCCGTCATCACAGCCGGT‑GTTTACGCACCTCGCCaa > 2:3012325/1‑289 (MQ=255)
aagtgaATGAGAGCGACAAAATGAACCAGGACCTGACCGACATTTTGCGTGAGATTGAAATTGAGGCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGAGAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCaaaaa < 2:3138424/287‑1 (MQ=255)
aCGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCaaaaa < 2:1852552/289‑1 (MQ=255)
cGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCaaaaaa > 2:1995932/1‑289 (MQ=255)
cAGACCCGGACCGCCAGTCTGCGTGTGATTAGAATTGAGTGCGAACGCGGGGCGCACGGTAAAGCCAAACTCTCGCTTCTGGATAAAGTGGAAAATGGTGGCCTGAAAGTGCAGCAGGGTATTATCGCGTGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcg < 2:2324222/289‑1 (MQ=255)
gACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcgca < 1:457013/289‑1 (MQ=255)
cATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAatcat < 1:1263631/288‑1 (MQ=255)
aTTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAAtcatca < 1:2152494/289‑1 (MQ=255)
aTTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAAtcatca < 1:2642920/289‑1 (MQ=255)
cGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAAcc > 1:257872/1‑288 (MQ=255)
aGTCCGAACGCGTGGCGCACGGGAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATTGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGGATGCACTGCGCGGTCAATCCTGTAGAAATGACACTTTCTCGCTGGCAGCTTACCCGTCATCACAGCCGGTGGTTTATGGATCTCGACAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGTAATCATCAGACCCGCTTTCtcatgccaa > 2:1641040/1‑280 (MQ=255)
aaCGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcg < 1:1159010/252‑1 (MQ=255)
cgcgTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGgcg < 1:411906/289‑1 (MQ=255)
gTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGcgcg < 1:3100727/288‑1 (MQ=255)
tGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCggg > 1:1199917/1‑289 (MQ=255)
cACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGAt > 1:564449/1‑288 (MQ=255)
cGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACg < 2:317755/289‑1 (MQ=255)
ggTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGc < 2:1144967/289‑1 (MQ=255)
aaaGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTTTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCa < 1:2015037/288‑1 (MQ=255)
aGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTgg > 2:406211/1‑209 (MQ=255)
ctcgctgctgGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGt < 1:1831906/285‑1 (MQ=255)
aGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCca > 2:610860/1‑288 (MQ=255)
ggAAAACGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCcaca < 1:1745210/287‑1 (MQ=255)
aaaaTGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTg < 1:2308927/226‑1 (MQ=255)
aaaaTGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGGTACGCCAATCAACAACGGCTTGAGTATTCGCGAcaacac > 2:2622994/1‑289 (MQ=255)
aaaaTGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACTCCAATCAACAACGGTTTGAGTATTCGACAcaccag > 2:1674852/1‑288 (MQ=255)
aaaaTGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACCCCAATCAACAACGGCTTGCGTATTCGCCAcaccc > 1:1058726/1‑287 (MQ=255)
ggTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATa > 1:1149169/1‑247 (MQ=255)
tCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATcaacaa < 1:526617/258‑1 (MQ=255)
tCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATcaacaa > 2:526617/1‑258 (MQ=255)
gCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGccc < 2:2029126/223‑1 (MQ=255)
aaaGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCg < 1:1644466/288‑1 (MQ=255)
agcagGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGAt < 2:1574036/172‑1 (MQ=255)
agcagGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGa > 1:2376351/1‑289 (MQ=255)
cagGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGaa < 2:1304366/288‑1 (MQ=255)
gggATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTCCCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCTCAGGCTCAATCATCAGAACCGCGTTCTGCGTCCCATGCTTGGGCGCGGGCGATACGCCCATCCACAACCGTTTGCGTATTCGCCACACCACGCCTACCTTCCCCAACcgtcgattc > 2:1950754/1‑281 (MQ=255)
tATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACg > 1:2903683/1‑223 (MQ=255)
tATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACg < 2:2903683/223‑1 (MQ=255)
tCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGAGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcg < 1:1875296/171‑1 (MQ=255)
cgGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGgcg < 1:2322363/207‑1 (MQ=255)
cgGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATcaacaa > 2:1456744/1‑229 (MQ=255)
ggCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGAtctc > 2:1512787/1‑126 (MQ=255)
ggCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGccc < 1:261217/194‑1 (MQ=255)
ggCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGccc > 2:261217/1‑194 (MQ=255)
gCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCTATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCCAACCGCGACGGCTCTAAGCCAGCtca > 1:1091650/1‑287 (MQ=255)
ttCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCca > 2:2310208/1‑240 (MQ=255)
ttCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACATTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGTATCCCGCCAGAAAAAGTGTGGTAGCCAATTTGATT‑GGCGCAGGCGCAACCATCAGAACCGCGTTCCGCGGCCCATGCTTTGGCGAGGGCGACACTCCCATCGACAACGGTTTACGTATTCCCGACACAACCCGTTACTTACCGAACACCGACAGCTCAAAGCCTGCAAAtcgc > 2:2674685/1‑286 (MQ=255)
cTGGCGGTACCTACTAAAACGCCATGACGGCGCCGAATGCACTGAGCGGTCAATCCCGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCCCAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGTTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCa < 2:1199917/289‑1 (MQ=255)
cTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATTGGGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGc > 1:769992/1‑289 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcgca > 2:2833040/1‑153 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGgcgc < 1:335734/191‑1 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGcgcg < 2:2418557/192‑1 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCCGCTAATGGGCAGATgtca > 2:3082169/1‑285 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATgtca > 1:2928031/1‑285 (MQ=255)
aaCTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGACACGTCGTGAAGCCAGCTAATGGGCAGAtctca > 2:679724/1‑284 (MQ=255)
aaCCACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGt < 2:1917623/222‑1 (MQ=255)
cGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcg < 2:571573/146‑1 (MQ=255)
cGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCacac < 1:1950692/228‑1 (MQ=255)
cGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGa > 2:2794457/1‑246 (MQ=255)
cGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACAACTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTg > 1:138293/1‑289 (MQ=255)
cATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATg < 1:750914/289‑1 (MQ=255)
aTCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAgg < 1:857042/107‑1 (MQ=255)
tCGCGGCGGCGAATGTACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGGAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGa < 1:2100858/289‑1 (MQ=255)
gcggcggcgAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACg < 1:1612998/289‑1 (MQ=255)
gcggcggcgAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACg < 1:1674852/289‑1 (MQ=255)
gAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCTTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCt < 1:609272/289‑1 (MQ=255)
aCTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTa < 1:804083/209‑1 (MQ=255)
gcgcGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGgtg < 1:2212243/89‑1 (MQ=255)
gcgcGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGct > 1:1992868/1‑227 (MQ=255)
gcgcGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCg > 1:1464944/1‑289 (MQ=255)
gcgcGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCg > 2:2100663/1‑289 (MQ=255)
gcgcGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCCCGTTCTATCGcgcg > 2:2503162/1‑285 (MQ=255)
cgcgGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcg < 1:2988620/109‑1 (MQ=255)
cgcgGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGa > 1:2254240/1‑184 (MQ=255)
gcgGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATcaacaa > 2:440750/1‑175 (MQ=255)
ggTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGaa > 1:1793691/1‑219 (MQ=255)
ggTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACt < 1:679724/288‑1 (MQ=255)
tCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGc < 2:1086171/187‑1 (MQ=255)
tCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAg < 2:791385/230‑1 (MQ=255)
ccTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑ggcgcaggcgca > 2:1743/1‑107 (MQ=255)
ccTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGt < 2:2387329/170‑1 (MQ=255)
tgGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCAGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGt > 1:1048994/1‑289 (MQ=255)
ggCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTg > 2:2475392/1‑122 (MQ=255)
ggCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTg < 1:2475392/122‑1 (MQ=255)
ggCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGc > 1:988657/1‑126 (MQ=255)
ggCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGACGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGCCGCTCGTTCTCTTGCTGCTCCTGCGGCAACCGGTg > 2:2561627/1‑289 (MQ=255)
ggCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTg > 1:2824928/1‑289 (MQ=255)
gCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTg < 2:922488/288‑1 (MQ=255)
gcaTGACACCTTCTCGCTGGCAGTTTACCCGACATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTgg < 2:725111/286‑1 (MQ=255)
cAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTgg < 1:2503162/288‑1 (MQ=255)
aTGACCCCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGct < 2:1151882/214‑2 (MQ=255)
aTGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTg > 1:1916613/1‑239 (MQ=255)
aTGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAAc < 1:2401994/281‑1 (MQ=255)
aTGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCCAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCCGCGGTGGCGTTGATCGACGCTCGGTCTATCGCCTCGAATCCGGCACACGGTGGc > 2:2182602/1‑287 (MQ=255)
tGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTa < 2:1910344/185‑1 (MQ=255)
acacCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATggg < 2:2262241/221‑1 (MQ=255)
acacCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTAttt > 1:2687737/1‑289 (MQ=255)
tctcgcTGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGt > 1:1425224/6‑275 (MQ=255)
tGGCAGTTTACCCGTCATCACAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAAc > 1:3072240/1‑280 (MQ=255)
||||||
CCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCAGCCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCAGCCTGGCAGTTTACCCGAGTAGTCAGCCGGT‑GTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATT‑GGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGAGTGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACC > CP042583/667245‑667776
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
