Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 733,763 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583733,7630AT99.5% 889.7 / NA 376intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (189/183);  minor base G (0/2);  total (189/187)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583733,7640GC99.5% 883.3 / NA 376intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (188/184);  minor base T (1/1);  total (189/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583733,7650CG99.7% 892.7 / NA 376intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (189/186);  total (189/187)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 376 total aligned reads displayed.

AAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGAGC‑GCTAGTACCGGCGAAGCGGACTGGGCACTAAGCCCGCTGTTTGCCAGCCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAAAGCCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGAGCGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCAGCGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGT  >  CP042583/733488‑734044
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                        
aaGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCG‑GCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTaa                                                                                                                                                                                                                                                                              >  1:1387719/1‑289 (MQ=255)
      aaaaaGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCG‑GCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTaaaaa                                                                                                                                                                                                                                                                           >  1:2143670/1‑286 (MQ=255)
       aaaaGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCG‑GCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑CCAGTAAAAACCt                                                                                                                                                                                                                                                                        >  1:1867952/1‑288 (MQ=255)
         aggggggaggcgTGCGGATTTTCT‑CACTGGGTTGTTCGGCTTCAACCGGCGAGGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGAc                                                                                                                                                                                                                                                                     <  2:1026845/281‑1 (MQ=255)
                    gTGGGGGTGTTCTACACTGGCTGGTCG‑GCTTCAACCGGAGGTGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGAACCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGa                                                                                                                                                                                                                                                          <  2:1845123/289‑1 (MQ=255)
                                        gctggtcggcttcaaCCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGaca                                                                                                                                                                                                                                              >  1:253530/15‑282 (MQ=255)
                                        gctggtcggcttcaaCCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGaca                                                                                                                                                                                                                                              <  2:816266/268‑1 (MQ=255)
                                         ctggtccgcttcaaCCGGCGAAGCGGACTGGGCACTATGGCCGCTTTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCtt                                                                                                                                                                                                                                       <  2:2968031/275‑1 (MQ=255)
                                             tcggcttcaaCCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCATGCACTGAACACTAATGATCCGGCGGAAAAGACCCGCTTATATACGGCGGCGCAGGATATCATCTGGCACGAATCGCCGTGGATCCCGCTGGATGTAGAAAAACTGGTGTCGTCTC‑ACAGTAAACACCTGACCGGTTTTCTGAGCATGCACGACAACGGCTTCAGCt                                                                                                                                                                                                                                  >  2:1738307/10‑289 (MQ=255)
                                              cggcttcaaCCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGACTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCt                                                                                                                                                                                                                                  <  2:390890/280‑1 (MQ=255)
                                                      aCCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGAcg                                                                                                                                                                                                                         <  1:2633149/289‑1 (MQ=255)
                                                           cGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGAt                                                                                                                                                                                                                    >  1:1225900/1‑289 (MQ=255)
                                                               gCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGAAC‑ACCGTAAAAACCCGACCGGCTTGTCGATCCTGCCAGTAACCGGGTTCCGCGTTGAAAACCCGAGTTTgg                                                                                                                                                                                                                >  2:2119969/1‑288 (MQ=255)
                                                                                 ccGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGaca                                                                                                                                                                                                                                              <  1:382407/241‑1 (MQ=255)
                                                                                      gTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGAt                                                                                                                                                                                                                    <  2:73131/262‑1 (MQ=255)
                                                                                             tcgcagAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTaa                                                                                                                                                                                  <  1:1783690/286‑1 (MQ=255)
                                                                                                 agAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTAc                                                                                                                                                                              >  1:1749861/1‑289 (MQ=255)
                                                                                                   aaCTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGt                                                                                                                                                                            >  1:1277207/1‑289 (MQ=255)
                                                                                                        gCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCa                                                                                                                                                                       >  2:1933343/1‑289 (MQ=255)
                                                                                                            ccGAGGCTGTTTAATCCCGCGTTTTACAGCAATAAACAGGTTGATGAATTCCTGGCTCCGGCACTGAAAACTAATTATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACg                                                                                                                                                                   <  2:3029648/289‑1 (MQ=255)
                                                                                                             cGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGa                                                                                                                                                                                          >  1:2935659/1‑265 (MQ=255)
                                                                                                                          tACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGtt                                                                                                                                                       >  1:859902/1‑287 (MQ=255)
                                                                                                                          tACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGtt                                                                                                                                                       <  2:859902/287‑1 (MQ=255)
                                                                                                                             cgcgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTgg                                                                                                                                                                                           >  1:599852/1‑248 (MQ=255)
                                                                                                                             cgcgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGAtt                                                                                                                                                   >  1:458857/1‑288 (MQ=255)
                                                                                                                               cgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGAc                                                                                                                                                                                                                                                                     <  1:1011846/172‑1 (MQ=255)
                                                                                                                               cgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTAGGTTGTCCAACGGTTACTGGGGTTGATGCCg                                                                                                                                                >  2:1576833/1‑289 (MQ=255)
                                                                                                                               cgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCg                                                                                                                                                >  2:771994/1‑289 (MQ=255)
                                                                                                                               cgTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGACTTGCAATaa                                                                                                                                                                                                           >  2:453139/1‑230 (MQ=255)
                                                                                                                                 ttttACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGAc                                                                                                                                              <  2:1225900/289‑1 (MQ=255)
                                                                                                                                            tAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTa                                                                                                                                      >  1:2498502/1‑286 (MQ=255)
                                                                                                                                              aaCAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATACGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTTGGGTTCATTCCGACGGTGTTTATCg                                                                                                                                   >  2:3091091/1‑287 (MQ=255)
                                                                                                                                              aaCAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGc                                                                                                                                                                                                    <  2:2374327/222‑1 (MQ=255)
                                                                                                                                                   gTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGa                                                                                                                                                                                                                                                          >  2:2030017/1‑163 (MQ=255)
                                                                                                                                                   gTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAAt                                                                                                                                                                                        <  2:2335443/229‑1 (MQ=255)
                                                                                                                                                   gTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTctcggt                                                                                                                            >  2:341126/1‑284 (MQ=255)
                                                                                                                                                     ggATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGAt                                                                                                                                                                                                                    <  1:2179312/199‑1 (MQ=255)
                                                                                                                                                       acagcTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTg                                                                                                                        <  1:245897/285‑1 (MQ=255)
                                                                                                                                                             tCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGc                                                                                                                                                                                                    >  1:1470950/1‑207 (MQ=255)
                                                                                                                                                              ccTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGtttt                                                                                                                 >  2:1430547/1‑289 (MQ=255)
                                                                                                                                                                  gCTCAGGGACGGAAAAGTAAGGGTCAGGCGGAAAAGCCCCGCTGAAATAAGGCGGCGCAGGATAGCATCTGGCAAGAAGCGCCGTGGAGCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTAt                                                                                                              <  2:2933072/288‑1 (MQ=255)
                                                                                                                                                                   ctaaGGCACTGAAAACGAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATAATCTGGCAAGAATCGCCGTGGATCCCGCTGGGGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTAtt                                                                                                             <  2:2733574/285‑1 (MQ=255)
                                                                                                                                                                   cTCAGGCACCGAAAACTATGGGACAGGCAGAAAAGTCCCACTTATATAAGGCGGCGCAGAGTATCATCTGGCAAGAATCGCCGTGGATCGCGCTGGTGGTAGAAGAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTAtt                                                                                                             <  2:1896698/288‑1 (MQ=255)
                                                                                                                                                                      aGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATg                                                                                                                                                                                       >  2:2154267/1‑211 (MQ=255)
                                                                                                                                                                      aGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATTGTCTCGGGTCTGGTGTTTTTTTTTg                                                                                                           >  2:933155/1‑287 (MQ=255)
                                                                                                                                                                       ggCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCa                                                                                                                                                                                                               <  1:787731/186‑1 (MQ=255)
                                                                                                                                                                         cACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTAtt                                                                                                             >  2:1820170/1‑282 (MQ=255)
                                                                                                                                                                             gAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATTAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCatat                                                                                                    >  1:1941531/1‑287 (MQ=255)
                                                                                                                                                                                      tGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGa                                                                                                                                                                                          <  1:2734688/192‑1 (MQ=255)
                                                                                                                                                                                      tGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACg                                                                                                                                                                   >  1:645294/1‑215 (MQ=255)
                                                                                                                                                                                      tGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCg                                                                                         >  1:515918/1‑289 (MQ=255)
                                                                                                                                                                                             gcggAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTg                                                                                                                                                                                            <  1:2686471/183‑1 (MQ=255)
                                                                                                                                                                                             gcggAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTg                                                                                                                                                                                            >  2:2686471/1‑183 (MQ=255)
                                                                                                                                                                                               ggAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGgcg                                                                                 <  1:20282/288‑1 (MQ=255)
                                                                                                                                                                                                        ccGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGAt                                                                                                                                                                                                                    <  2:152124/148‑1 (MQ=255)
                                                                                                                                                                                                        ccGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTctcggtgc                                                                                                                          <  1:2118639/238‑8 (MQ=255)
                                                                                                                                                                                                        ccGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCata                                                                                                     >  2:1610106/1‑259 (MQ=255)
                                                                                                                                                                                                           cTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTct                                                                                                                                <  1:2264056/229‑2 (MQ=255)
                                                                                                                                                                                                           cTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTct                                                                                                                                >  2:2264056/1‑228 (MQ=255)
                                                                                                                                                                                                              atataAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGc                                                                 <  1:933155/289‑1 (MQ=255)
                                                                                                                                                                                                                    ggcggcGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCa                                                                                                                                                                                                   <  1:970942/153‑1 (MQ=255)
                                                                                                                                                                                                                    ggcggcGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGaa                                                                                                                                                                                         >  1:2974346/1‑163 (MQ=255)
                                                                                                                                                                                                                    ggcggcGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCgat                                                                             >  1:165186/1‑271 (MQ=255)
                                                                                                                                                                                                                    ggcggcGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGaa                                                            >  1:1718280/1‑288 (MQ=255)
                                                                                                                                                                                                                    ggcggcGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGaa                                                            >  2:553806/1‑288 (MQ=255)
                                                                                                                                                                                                                      cggcgCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGCCACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCGGTTGTTTTTATGTGTCCATATGCTGCCCGGCGATCCGGCGCGATGGCTTACCGTGCCCGaa                                                            >  2:1677436/1‑286 (MQ=255)
                                                                                                                                                                                                                      cggcgCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACg                                                                                                                                             >  1:2365864/1‑205 (MQ=255)
                                                                                                                                                                                                                      cggcgCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGaa                                                            >  1:708531/1‑286 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGAt                                                                                                                                                                                                                    >  2:1771599/1‑131 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGc                                                                                                                                                                                                    >  2:1334153/1‑147 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAgg                                                                                                                                                                                                 >  2:249271/1‑150 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGAc                                                                                                                                              >  1:1308676/1‑201 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGAc                                                                                                                                              <  2:1308676/201‑1 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTg                                                                                                                        >  2:2875640/1‑223 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATAtgctg                                                                                                >  1:689191/1‑247 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGAt                                                      >  1:742609/1‑289 (MQ=255)
                                                                                                                                                                                                                         cgcAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGAt                                                      >  2:3161107/1‑289 (MQ=255)
                                                                                                                                                                                                                            aGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATgcg                                                   <  1:1333701/289‑1 (MQ=255)
                                                                                                                                                                                                                               atatCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCa                                                 <  1:1828804/288‑1 (MQ=255)
                                                                                                                                                                                                                               atatCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCa                                                 <  1:2658402/288‑1 (MQ=255)
                                                                                                                                                                                                                               atatAATCTGGCAAGAATCGCCGTGGGTCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAACAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAAGAAGGAACGCAGGGAGTGGAATGCTTAATTACGTTGTCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTTTCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGGGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCa                                                 <  2:616290/288‑1 (MQ=255)
                                                                                                                                                                                                                                   catcTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTTGTTTTCTTTGTCCATATGCTGCCCGGCGACCCGGCGCGAGTGATTCCCGGGCCGGCAGCTGCTGCGCAGGtca                                            >  2:2602247/1‑287 (MQ=255)
                                                                                                                                                                                                                                   catcTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTta                                            <  1:553806/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCtt                                                                                                                                                                                                                                       >  1:2327158/1‑97 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTAt                                                                                                              <  1:3062985/218‑1 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGa                                                             <  1:1589281/267‑1 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGa                                        >  1:2572431/1‑288 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGa                                        >  1:283779/1‑288 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGGTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGTCGATGCGCAGGTCATAGaa                                       >  2:2760730/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ggCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGGTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGgcg                                                                                 >  2:675630/1‑247 (MQ=255)
                                                                                                                                                                                                                                         gCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGaa                                       <  2:515918/288‑1 (MQ=255)
                                                                                                                                                                                                                                            agcatcgccGTGGATCCCGCGGATGGTAGAAATACTGGTGACGGCAA‑ACAGTAAAAACGTGACCGGTTTTTGGATCATGCCAGCCACCGGCTTCAGCTTTGAAGACCCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTGCTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGAGCAGGTTATAGAACTgg                                   <  2:251704/282‑1 (MQ=255)
                                                                                                                                                                                                                                            agaatcgccGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTta                                            >  1:1532913/8‑280 (MQ=255)
                                                                                                                                                                                                                                                   ccGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTca                            >  1:313648/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     gTGGATCCCGCTGGGGGGAGAGAACCGGGTGGCGGCGC‑AAGGTAAGGACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAGGACGCGGGTTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGGTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTcag                           <  2:1280572/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             cGCTGGTGGTAGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTCTAGAACTGGTGCGTCAGCAGCTgggg                  >  1:3174156/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aGAAAAACTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGc        <  1:2883627/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          aaaaCTGGTG‑TCGGACAACAGTAAAAACCTGACCGGGTTTTGGATAATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGcc       <  2:1534516/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aCTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACt                                     >  2:2649556/1‑254 (MQ=255)
                                                                                                                                                                                                                                                                             aCTGGTGTCGGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGATGt  >  1:1559135/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                        
AAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGAGC‑GCTAGTACCGGCGAAGCGGACTGGGCACTAAGCCCGCTGTTTGCCAGCCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAAAGCCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGAGCGCAC‑ACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCAACGCAGGGAGTGGAATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCAGCGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGT  >  CP042583/733488‑734044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A