Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 760,922 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583760,9220AT99.7% 822.5 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (163/177);  minor base C (0/1);  total (163/178)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583760,9230GC99.7% 813.6 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (163/177);  minor base T (0/1);  total (163/178)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583760,9240TA99.1% 816.5 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (160/177);  minor base C (2/1);  total (163/178)
Fisher's exact test for biased strand distribution p-value = 6.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

GCCACCACGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTAGTTCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTAGTCTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTT  >  CP042583/760644‑761201
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
  caccacGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑c                                                                                                                                                                                                                                                                               <  1:1711778/287‑1 (MQ=255)
   accacGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTc                                                                                                                                                                                                                                                                             >  1:2998896/1‑288 (MQ=255)
    cctagTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGATTCCGGAAATCAACGCCCTGGCAACAGTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTTTCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGAATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGc                                                                                                                                                                                                                                                                           <  2:2480904/285‑1 (MQ=255)
      ccGTTACCGATGCTGGTCGTGTCCGGCGTGCGGATGGGGGTGAATCCGGAACTCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCt                                                                                                                                                                                                                                                                         <  2:62174/288‑1 (MQ=255)
         ttACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGaa                                                                                                                                                                                                                                                                      >  1:2190450/1‑289 (MQ=255)
              gATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGc                                                                                                                                                                                                                                                                 <  1:2711246/289‑1 (MQ=255)
                    ggTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTgcgc                                                                                                                                                                                                                                                           <  1:617197/289‑1 (MQ=255)
                     gTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTgcgc                                                                                                                                                                                                                                                           <  2:109064/288‑1 (MQ=255)
                        ttttCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGt                                                                                                                                                                                                                                                       <  1:1057555/289‑1 (MQ=255)
                          ttCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGACGACGGAACGTTGGGATTTTTTAAGAGAACCTACTCATCCCATT‑CGCGCCTGAATGTGCCTctgctgtgg                                                                                                                                                                                                                                                      >  2:572270/1‑285 (MQ=255)
                               gCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTCTCGCCTGGTATCTGATGGCTCGCGAACAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGAGGCTGCAGACACAAAAATTTGCAAACCTGGCTACCTAATGACGCG‑ATCTCAGCGGCATTGTTGTCTTGGAAGACGGTACGTTGGGATTTTATAAGGTAAGATCTTCTTCCCATGACTGGCGTG‑ACGTGCCTGCGTCGGTGCAgtga                                                                                                                                                                                                                                                >  2:2198698/1‑286 (MQ=255)
                                cGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑c                                                                                                                                                                                                                                                                               >  1:2897331/1‑257 (MQ=255)
                                cGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑c                                                                                                                                                                                                                                                                               <  2:2897331/257‑1 (MQ=255)
                                    cGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTggcggc                                                                                                                                                                                                                                           >  1:1207094/1‑289 (MQ=255)
                                        tGGGGTTGAAGGCGGGACTCATCGCCCTTGCAAGATTGATCTTCGGCGCGGTCGTAAGTGTCGGATTTATCGACTGGTATCTGACGGCGCGCGAAGAAAAACAGCGGATTCGAGACCTCCAGCGTGCAAGGCGTGGCTGAAGACACTAACATTTGCCTACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCt                                                                                                                                                                                                                                        <  2:1316815/288‑1 (MQ=255)
                                        tGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCt                                                                                                                                                                                                                                        <  1:2272678/288‑1 (MQ=255)
                                        tGGGAGGGATTCGGGTAAACACCGCCCTGGCAACATTCGTCGTCGGCGCGGTCGGAATTGTCGGATTTAGCGCCGGGTATCTAATGGCTCGCGCAGAAAAACAGCGGATACGCGACTGCCAGCGTGCAAGACAGGGCTGAAGACACTAAAAATTGCAAACCTGGCGACAGAATGCCGCGCATGTC‑ACGGCATAGTTTTCATGGAATACGAAACGTTGGAATTTTTTAAGAATACATCTTCATCGCAAG‑CGCGCCTGAGTGTGCCTGCGCTGGTGCAGGTGGCGgcgcg                                                                                                                                                                                                                                        <  2:1284678/288‑2 (MQ=255)
                                           gggTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     <  2:2009256/288‑1 (MQ=255)
                                            ggTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTgcg                                                                                                                                                                                                                                                            >  1:1975925/1‑264 (MQ=255)
                                             gTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   <  1:435462/288‑1 (MQ=255)
                                                 aTCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     <  1:688375/282‑1 (MQ=255)
                                                   ccGGAAATCAACGCCGGGGCAACATTGATCCTCGGCGCTGTCGGACTTGTCGGATTTATCGACTGGTATCGTATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAACGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATtattat                                                                                                                                                                                                                            <  2:2125865/289‑1 (MQ=255)
                                                     ggAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CCCGCCTGAATGTGCCTGCGCTTGTGCAAGGTGCGGGGCTCGCCCGTCTTATGa                                                                                                                                                                                                                          >  2:1876137/1‑289 (MQ=255)
                                                            aaCGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGgcggcg                                                                                                                                                                                                                                          <  1:276778/266‑1 (MQ=255)
                                                            aaCGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGgcggcg                                                                                                                                                                                                                                          >  2:276778/1‑266 (MQ=255)
                                                                   tGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTgc                                                                                                                                                                                                                                                             >  2:1732571/1‑240 (MQ=255)
                                                                   tGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTgc                                                                                                                                                                                                                                                             <  1:1732571/240‑1 (MQ=255)
                                                                       aaCATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGc                                                                                                                                                                                                        <  2:1904053/289‑1 (MQ=255)
                                                                              aTCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGCAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGCTTTCATGGCAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑TTCGCCTCAATGTGCCTTCGCTTGTTCAGGTGTCCGCCCTCGCCATTACTATGATCCTTGGCCCCGACGTTCTtatgat                                                                                                                                                                                                 >  2:2579056/1‑289 (MQ=255)
                                                                               tCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTgatgat                                                                                                                                                                                                 <  1:1537823/288‑1 (MQ=255)
                                                                                   cGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGCCGTGCTTGTGGTTTTCa                                                                                                                                                                                            >  2:2093955/1‑289 (MQ=255)
                                                                                   cGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CCCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCAGTATTATGAGCCGTGGCCCTGACGTGCttgttgttgtcc                                                                                                                                                                                            >  2:141610/1‑278 (MQ=255)
                                                                                    ggCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGAtt                                                                                                                                                                                                >  2:2467483/1‑284 (MQ=255)
                                                                                          gTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTGGCCTGAATGTGCCTGCGCTGGt                                                                                                                                                                                                                                                       <  1:880169/223‑1 (MQ=255)
                                                                                          gTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGaa                                                                                                                                                                                                                                                                      <  1:908426/208‑1 (MQ=255)
                                                                                          gTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTggcg                                                                                                                                                                                                                                             <  2:120524/233‑1 (MQ=255)
                                                                                           tCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTg                                                                                                                                                                                                                    >  1:2581437/1‑257 (MQ=255)
                                                                                               aaTTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGc                                                                                                                                                                                 <  1:1667393/288‑1 (MQ=255)
                                                                                                 ttGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTg                                                                                                                                                                              <  2:1157598/289‑1 (MQ=255)
                                                                                                   gTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTgc                                                                                                                                                                             >  1:304084/1‑288 (MQ=255)
                                                                                                     cGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   >  1:373100/1‑232 (MQ=255)
                                                                                                     cGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCTTGcgcg                                                                                                                                                                          >  2:1686314/1‑289 (MQ=255)
                                                                                                     cGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGcgcg                                                                                                                                                                          >  2:1394787/1‑289 (MQ=255)
                                                                                                                 cTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGt                                                                                                                                                              <  1:1238352/289‑1 (MQ=255)
                                                                                                                    gTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGttca                                                                                                                                                           >  2:3153515/1‑289 (MQ=255)
                                                                                                                        ccgATTGCTGGAGCAGAAAAACAGCGGATACGCGACATCCAGCTTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATACTTCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCTTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGGGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGttcattca                                                                                                                                                       <  2:1597237/287‑1 (MQ=255)
                                                                                                                           aTGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTgcg                                                                                                                                                                            >  2:339571/1‑265 (MQ=255)
                                                                                                                              gCTCTCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   <  2:3002912/207‑1 (MQ=255)
                                                                                                                               cTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTgatgat                                                                                                                                                                                                 >  2:756048/1‑240 (MQ=255)
                                                                                                                                 cgcgCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     <  2:12238/202‑1 (MQ=255)
                                                                                                                                  gcgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGAAGTGGCTGAAGACACTAAAATTTGCCAACCTTGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTa                                                                                                                                             <  1:1852805/289‑1 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTgg                                                                                                                                                                                                                                               <  2:922042/190‑1 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTgg                                                                                                                                                                                                                                               >  1:922042/1‑190 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     >  2:2971882/1‑200 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   >  1:3190991/1‑202 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGc                                                                                                                                                                                                        >  1:1601094/1‑229 (MQ=255)
                                                                                                                                   cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACATGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCCCGCCCTTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGGTCATTCATCGCa                                                                                                                                                  >  1:247434/1‑283 (MQ=255)
                                                                                                                                          aaaCAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTg                                                                                                                                     <  1:1193247/289‑1 (MQ=255)
                                                                                                                                          aaaCAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTAAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTg                                                                                                                                     <  2:2720943/289‑1 (MQ=255)
                                                                                                                                                  gATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACg                                                                                                                                                                                       >  2:1032311/1‑231 (MQ=255)
                                                                                                                                                            aTCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   >  2:887518/1‑177 (MQ=255)
                                                                                                                                                             tCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCCCGCCATTATTATGATCCGTGGCCTCGACTGGCTGATGAGTTTCAATACGCTGGGCGTCCGCGGTATTGGCGGGTTCATTCATCGCCGCGTACAAACCCGGATGTTAGCGCCGGTtttt                                                                                                                  >  2:3051345/1‑289 (MQ=255)
                                                                                                                                                                 gCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTgg                                                                                                                       >  1:3088403/1‑280 (MQ=255)
                                                                                                                                                                   gTGCAAGACGTGGCTGAAGACACTAAACTTTGTCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGTAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAg                                                                                                             <  1:2444390/288‑1 (MQ=255)
                                                                                                                                                                              ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   <  2:1469723/159‑1 (MQ=255)
                                                                                                                                                                              ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   >  1:1469723/1‑159 (MQ=255)
                                                                                                                                                                              ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGATTTCTTTCATCGCAGCGTAAAAACCTGGAGGTTAACGCGGGTCTTTTTAAGACGTCTggg                                                                                                    >  2:2292241/1‑285 (MQ=255)
                                                                                                                                                                              ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTg                                                                                                                                     <  1:2331826/253‑1 (MQ=255)
                                                                                                                                                                              ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAg                                                                                                             >  1:1557558/1‑277 (MQ=255)
                                                                                                                                                                               gCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTgg                                                                                                                       >  1:1407441/1‑266 (MQ=255)
                                                                                                                                                                                        acTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCAtt                                                                                       <  1:2924105/289‑1 (MQ=255)
                                                                                                                                                                                        acTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCAtt                                                                                       <  1:1333343/289‑1 (MQ=255)
                                                                                                                                                                                        acTAAAATTTGCCAACCTGGCTACAT‑ATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTg                                                                                      >  1:2050299/1‑289 (MQ=255)
                                                                                                                                                                                          tAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTga                                                                                     >  2:1548004/1‑289 (MQ=255)
                                                                                                                                                                                                  gCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTa                                                                                                                                             >  1:750760/1‑225 (MQ=255)
                                                                                                                                                                                                   ccAACCGGGCTACAT‑ATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGgtg                                                                            <  2:2050299/288‑1 (MQ=255)
                                                                                                                                                                                                    aaaCCGGGCTACATAATGCCGCGCATGTC‑GCGGCATGGTTTTCATGGAAGACGAAACGTTGGGATTTGTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGgtg                                                                            <  1:667504/287‑1 (MQ=255)
                                                                                                                                                                                                             tACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTGTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGttttca                                                                  <  1:572270/289‑4 (MQ=255)
                                                                                                                                                                                                               cATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCATGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTGTTTAAGCAGTCTGGTGCTGGtt                                                                                             <  1:2820797/260‑1 (MQ=255)
                                                                                                                                                                                                                    tGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTg                                                                                                   >  2:938391/1‑249 (MQ=255)
                                                                                                                                                                                                                    tGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTg                                                                                                   <  1:938391/249‑1 (MQ=255)
                                                                                                                                                                                                                    tGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGa                                                           >  1:341913/1‑289 (MQ=255)
                                                                                                                                                                                                                     gCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAg                                                                                                             >  1:787707/1‑238 (MQ=255)
                                                                                                                                                                                                                     gCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAg                                                                                                             <  2:787707/238‑1 (MQ=255)
                                                                                                                                                                                                                     gCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGGTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCAGTTAGCTCTGGTGTGCGTTTTCACTGGTgta                                                          >  2:898900/1‑287 (MQ=255)
                                                                                                                                                                                                                      ccGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     <  2:2344738/117‑1 (MQ=255)
                                                                                                                                                                                                                         cgcATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGc                                                                                                                                                                                                                                     <  2:433086/114‑1 (MQ=255)
                                                                                                                                                                                                                         cgcATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCa                                                                                         >  2:663797/1‑254 (MQ=255)
                                                                                                                                                                                                                         cgcATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGCTCTGGTGTGCGTTTTCACTGGTGaaatgc                                                      >  2:722623/1‑286 (MQ=255)
                                                                                                                                                                                                                         cgcATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAggg                                                      >  1:1285160/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ttGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGgcgcg                                        <  1:502399/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ttGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGgcgcg                                        <  1:2093955/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tagTTTTCAGGGAAGACTATACGTTGGGATTTTTTAAGAAAGCATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTAAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGgcgc                                         <  1:1005902/286‑1 (MQ=255)
                                                                                                                                                                                                                                         tGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   <  1:2354227/101‑1 (MQ=255)
                                                                                                                                                                                                                                           ttttCATGGAAGACGAAACGTTGGGATGTTTTAAGAAACCACCTCCATTTCCTG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTg                                     <  2:1641419/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aTGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAg                                                                                                                                                 <  2:2842865/176‑1 (MQ=255)
                                                                                                                                                                                                                                                     aGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCa                                                                                                                                                                                                                                   <  2:502910/89‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATctgc                          <  1:2533029/287‑1 (MQ=255)
                                                                                                                                                                                                                                                         gAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGa                       <  1:1895657/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         gAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGa                       <  1:1024755/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
GCCACCACGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCATGTC‑GCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTAGTTCTCATG‑CTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTAGTCTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTT  >  CP042583/760644‑761201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A