Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,466,859 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,466,8590GC99.7% 770.8 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (171/150);  total (172/152)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,466,8600CG99.4% 755.9 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (172/149);  total (172/152)
Fisher's exact test for biased strand distribution p-value = 2.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,466,8610TA98.8% 762.8 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (170/148);  minor base C (2/2);  total (172/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

ATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATGCTCA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTACTGC‑CAATACTGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGCCTGATCTACGGTACGCACGAACGGGATCATGATCT  >  CP042583/1466587‑1467139
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                        
atGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTc                                                                                                                                                                                                                                                                            >  1:2130434/1‑288 (MQ=255)
atGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTACATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTc                                                                                                                                                                                                                                                                            >  2:660041/1‑288 (MQ=255)
      cgTTTAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCa                                                                                                                                                                                                                                                                      <  1:1973431/288‑1 (MQ=255)
        tttAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCg                                                                                                                                                                                                                                                                   >  2:2385213/1‑289 (MQ=255)
                 tgATGTCTGTGAAGAGATTTAATAAGTTTCCTCTTCGGGTATCACCTAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGTCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCa                                                                                                                                                                                                                                                          <  2:2308915/288‑1 (MQ=255)
                  gATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCg                                                                                                                                                                                                                                                                        >  1:1916762/1‑274 (MQ=255)
                  gATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCAt                                                                                                                                                                                                                                                         >  2:516327/1‑289 (MQ=255)
                     gTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAGCGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGa                                                                                                                                                                                                                                                      <  1:246328/289‑1 (MQ=255)
                       ttgtgAGTAGATTGAATAAGTTTCATCTCCGGCGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    <  2:1800369/288‑1 (MQ=255)
                       cTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    <  2:478500/289‑1 (MQ=255)
                                gaTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTgc                                                                                                                                                                                                                                                               <  2:92690/269‑1 (MQ=255)
                                gaTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTgc                                                                                                                                                                                                                                                               >  1:92690/1‑269 (MQ=255)
                                gaTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGac                                                                                                                                                                                                                                           >  1:2379620/1‑289 (MQ=255)
                                 aTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCttt                                                                                                                                                                                                                                                                             <  1:884348/254‑1 (MQ=255)
                                 aTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCttt                                                                                                                                                                                                                                                                             >  2:884348/1‑254 (MQ=255)
                                 aTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGac                                                                                                                                                                                                                                           >  1:1673333/1‑288 (MQ=255)
                                 aTTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGac                                                                                                                                                                                                                                           >  1:2275361/1‑288 (MQ=255)
                                         aGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCg                                                                                                                                                                                                                                  <  1:1759931/289‑1 (MQ=255)
                                           tttCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTTCTTTACCCGCCTCGTTGCGCTCATCGAACAATTCAGAcacccacccgga                                                                                                                                                                                                                                >  2:901080/1‑281 (MQ=255)
                                              cATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTc                                                                                                                                                                                                                             <  1:278344/289‑1 (MQ=255)
                                              cATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTc                                                                                                                                                                                                                             <  1:3173840/289‑1 (MQ=255)
                                              cATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTc                                                                                                                                                                                                                             <  1:2333621/289‑1 (MQ=255)
                                               aTCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCTACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGTTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCa                                                                                                                                                                                                                            <  2:1534445/289‑1 (MQ=255)
                                               aTCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTc                                                                                                                                                                                                                             >  2:1192728/1‑288 (MQ=255)
                                               aTCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCa                                                                                                                                                                                                                            <  2:1041835/289‑1 (MQ=255)
                                               aTCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCa                                                                                                                                                                                                                            <  1:660041/289‑1 (MQ=255)
                                                           cacaTAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCg                                                                                                                                                                                                                >  2:2493780/1‑289 (MQ=255)
                                                                     cggcgtctatgggccggcGGGGAGTTATTTTATTTCGTCAGTTCAGCCAGGCTTAACCAGGTATGCGCCACGGTGTCCGGGTTCGCAGACAGGCTATCGATCCCCTCTTCCATCCACCAGGCGGCAAAGTCGTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCGTCGCGGCACGGATAGCCCTCGACA‑GCAGTGCTTTCACCGCAGCGTTGCGGTCATCGAACTAGTGAGACACCGCGCGGGAGTCACGGTCCAGACCGAGCGCCAGca                                                                                                                                                                                                      <  2:617524/277‑2 (MQ=255)
                                                                     cGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    <  1:1514840/243‑1 (MQ=255)
                                                                     cGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACAACGCCGGAGTCACGGTCCAGCCCGAGCGCCa                                                                                                                                                                                                         >  1:1727208/1‑286 (MQ=255)
                                                                       gCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCa                                                                                                                                                                                                                                                                      >  1:2580684/1‑223 (MQ=255)
                                                                       gCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGc                                                                                                                                                                                                    >  1:1373653/1‑289 (MQ=255)
                                                                        cGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAGCCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACCCCGGAGTCACGGTCCAGACCGAGCGCCAGCTg                                                                                                                                                                                                     >  2:1590814/1‑287 (MQ=255)
                                                                            tAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCCCCGCATCCTTGCGCTCATCGAACAATTCAGACACCCCCCCGGCGTCACGGTCCCCAACGCGCGCCACCAGCGTCat                                                                                                                                                                                               >  2:1658294/1‑289 (MQ=255)
                                                                                     ccgGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCACATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGCCCGAGCGCCAGCTGCCGCATATCGtttga                                                                                                                                                                                      >  2:796361/1‑286 (MQ=255)
                                                                                     ccgGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCACTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTTACCGCAAATCACGACATATTTGCCCTGTTTCTTCGCGGCACGGACAGCCATCGACA‑TCAGTGCTTTCACCGCATCGTTGCCCTCATCGAACACTTCAGACACCACGCCCGAGTGACGGTCCAGACCGAGCGCCAGCCGCGTCCTATCGttgta                                                                                                                                                                                      >  2:714846/1‑286 (MQ=255)
                                                                                                                   ccAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTc                                                                                                                                                                                                                             >  2:1412785/1‑220 (MQ=255)
                                                                                                                        cTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGa                                                                                                                                                     >  1:2165385/1‑286 (MQ=255)
                                                                                                                        cTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGAGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGa                                                                                                                                                     >  1:1166363/1‑286 (MQ=255)
                                                                                                                                    tGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCa                                                                                                                                      <  1:1078749/289‑1 (MQ=255)
                                                                                                                                           cGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    >  1:573916/1‑173 (MQ=255)
                                                                                                                                           cGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    <  2:573916/173‑1 (MQ=255)
                                                                                                                                           cGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATTTTCGAGGAACTGCCCGGCCAGCCAGGCGtt                                                                                                                               >  2:1350573/1‑289 (MQ=255)
                                                                                                                                                     gTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCCCGGCCAGCAAGGCGTTGGCCGGGAtt                                                                                                                     >  2:2230937/1‑289 (MQ=255)
                                                                                                                                                        cagcgcaaGGCTACCGATCCCATGTTCCATCAACCATGCGGCCAAGTCTTCGTGGTCGGACGGACCCAGCCCGCAAATCCCTACATATTTGCCCTGTTGTTTCGCGGCTCGGATAGCCATCTACA‑GCAGTGCTTTGACCGCATCGTTGCGCTCATCGAACAATTCAGACACGACGCCGGAGTCACGGTCCAGACCGGGCGCCCGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTca                                                                                                                  <  2:1903986/282‑1 (MQ=255)
                                                                                                                                                        cAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    <  1:2191724/160‑1 (MQ=255)
                                                                                                                                                        cAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAg                                                                                                                                                                                                        >  2:2013486/1‑204 (MQ=255)
                                                                                                                                                        cAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGtttgagcc                                                                                                                                                                                   <  1:1114486/225‑7 (MQ=255)
                                                                                                                                                        cAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGtttgagcc                                                                                                                                                                                   >  2:1114486/1‑219 (MQ=255)
                                                                                                                                                        cAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGtttga                                                                                                                                                                                      >  1:1039173/1‑219 (MQ=255)
                                                                                                                                                           agaCAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGAGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTcaca                                                                                                                <  2:1166363/288‑1 (MQ=255)
                                                                                                                                                               aGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAgcgc                                                                                                                                                                                                           <  1:1413527/194‑1 (MQ=255)
                                                                                                                                                               aGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTTAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCCGCAAGGGGTTGGGCGGGATTTGCAAcatca                                                                                                           >  2:2178707/1‑289 (MQ=255)
                                                                                                                                                               aGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACAcatca                                                                                                           >  1:2013654/1‑289 (MQ=255)
                                                                                                                                                                ggCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAat                                                                                                                                                              >  2:2968816/1‑237 (MQ=255)
                                                                                                                                                                ggCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAat                                                                                                                                                              <  1:2968816/237‑1 (MQ=255)
                                                                                                                                                                 gCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCg                                                                                                                                                                                                   >  1:366173/1‑200 (MQ=255)
                                                                                                                                                                 gCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTc                                                                                                                                              <  2:2551747/252‑1 (MQ=255)
                                                                                                                                                                 gCTATCGATCCCCTCTTCCATCAACCATACGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCg                                                                                                                                                                                                   <  2:366173/200‑1 (MQ=255)
                                                                                                                                                                  cTATCGATCCCCTCTTCCATCAACCAGGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTca                                                                                                                  <  1:1275137/279‑1 (MQ=255)
                                                                                                                                                                         tCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGAttt                                                                                                  >  2:559264/1‑288 (MQ=255)
                                                                                                                                                                               ctTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAAc                                                                                                                                                                                                                                                    >  1:98527/1‑137 (MQ=255)
                                                                                                                                                                                  ccATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAgg                                                                                                                                   >  1:972695/1‑246 (MQ=255)
                                                                                                                                                                                  ccATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGtt                                                                                        <  1:2994990/289‑1 (MQ=255)
                                                                                                                                                                                   cATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAAttgagaag                                                                                                                                                                        <  1:2838862/208‑8 (MQ=255)
                                                                                                                                                                                   cATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAAttgagaag                                                                                                                                                                        >  2:2838862/1‑201 (MQ=255)
                                                                                                                                                                                       aaCCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGc                                                                                   <  1:2252234/289‑1 (MQ=255)
                                                                                                                                                                                        aCCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTca                                                                                                                  >  2:206645/1‑257 (MQ=255)
                                                                                                                                                                                         ccATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCa                                                                                 <  1:1346135/289‑1 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACTGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGAGACTGCTCGGCCAGCAAGGCCTTGGATGGGATTTCACCAATCATGATGATTTTCATCACGTTTCCTCCACGt                                                                              >  2:320236/1‑289 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTgc                                                                                                                                                                                                                                                               <  1:409039/113‑1 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTgc                                                                                                                                                                                                                                                               >  2:409039/1‑113 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGtttga                                                                                                                                                                                      <  2:2768162/186‑4 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCatgat                                                                                                       <  2:1954078/264‑1 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGcc                                                                                  >  1:557464/1‑285 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACgg                                                                              >  1:2689166/1‑288 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGt                                                                              >  1:2503021/1‑289 (MQ=255)
                                                                                                                                                                                            tGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCCCGGCCAGCAAGGCGTTGGACGGGCTTTCACAAATCATGATGATTTTCAGCCTCTTCTCGCCACGt                                                                              >  2:1502144/1‑289 (MQ=255)
                                                                                                                                                                                              cGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCatgat                                                                                                       >  1:3085244/1‑262 (MQ=255)
                                                                                                                                                                                              cGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCatgat                                                                                                       <  2:3085244/262‑1 (MQ=255)
                                                                                                                                                                                                  aaaGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGc                                                                        <  1:502675/289‑1 (MQ=255)
                                                                                                                                                                                                      tCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCg                                                                                                                                             >  1:3027646/1‑216 (MQ=255)
                                                                                                                                                                                                                  gacggacCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGc                                                                                                                                                >  1:43418/1‑201 (MQ=255)
                                                                                                                                                                                                                    cggacCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAAATGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGttct                                                      <  1:1832706/289‑1 (MQ=255)
                                                                                                                                                                                                                           tGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAacca                                               <  1:1192728/289‑1 (MQ=255)
                                                                                                                                                                                                                           gcaCCGCAAATCCCGACATATTTGCCATGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCAGCGTTGCGCTCATCGAACAATTCCGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAacca                                               <  2:2605410/287‑1 (MQ=255)
                                                                                                                                                                                                                             aCCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGacac                                                                                                                                                                                                                                         <  2:979294/102‑1 (MQ=255)
                                                                                                                                                                                                                             aCCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGc                                                                        >  1:613106/1‑262 (MQ=255)
                                                                                                                                                                                                                                gccaaTCCCTACATCTTTGCCCTGTTTGTACGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCt                                          <  2:1301694/286‑1 (MQ=255)
                                                                                                                                                                                                                                 cAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCtt                                         >  1:727762/1‑289 (MQ=255)
                                                                                                                                                                                                                                 cAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCtt                                         >  1:1603982/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gcccGACACATTTGCCCTGTTTCTGCGCGGCAGCGCTAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGTCACCACGCCGGAGTCACGGTCCAGACCTAGCGCCCGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTGTCGc                                     <  2:1448658/288‑1 (MQ=255)
                                                                                                                                                                                                                                     cccccACATATCTGCCCTATTTCTTCGCGGCACGGCTAGCCATCGCAA‑GCAGTGCTTTCACCGCCTCGTTTCGCTCATCGAACAATTCAGAACCCACGCCGGAGTCACGGTCAAGACCGAGCTCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGc                                     <  2:1727208/288‑1 (MQ=255)
                                                                                                                                                                                                                                     caccggccttttaccccTTTTTCTTTGCGGCACTGATACCCAGCGACG‑ACAAGGCTGTCACCCAATGGTTCCGCTCTCAGAACAAGTCACGAACCAGTCCGGGGTCACGGTCCAGACCGGGCGCCAGGTTCGTCATCTCGTT‑TTGCACAATTGAGGAGGCGTCGAAATATTTGAGGAACTGGTCGGCCGGCAATGCGTTTGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGc                                     <  2:2275361/275‑1 (MQ=255)
                                                                                                                                                                                                                                                ttGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTGTCGCCACGGTTCAGCCTCTGACGCGCCAGGTCGTCAACCACCCTATTCGCCTGAttcaccg                          >  1:2855942/1‑283 (MQ=255)
                                                                                                                                                                                                                                                ttGCCCTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGc                                     <  2:3005895/278‑1 (MQ=255)
                                                                                                                                                                                                                                                     cTGTTTCTTCGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCg                                                                                                                                 <  1:2902535/181‑1 (MQ=255)
                                                                                                                                                                                                                                                          tcttcGCGGCCGGGATAGCCAT‑CGCAGGAAGTGCTTTGACCGCATCGTTGCGCTCATCGAACAATTCCGACACCACGCCGGAGTCACGGTCCAGACCGGGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGCCTGATCTACGGTACGCACGaa                <  2:2933246/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          tcttcGCGGCACGGATAGCCATCGACA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGCCTGATCTACGGTACGCACGaa                <  1:796361/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ttcGCTGCACGGATAGCCATCGACA‑GCAGTGCTTTCATCGCATCGTTGCGCTCATCAAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTTGAGC‑CAATTGAGAAGCCGTCGAAATAGTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATTATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCCACCACCGCTTTCGCCTGATCTACGGTACGCACGAACg              <  1:2712175/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                        
ATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAAGTTTCATCTTCGGGGATCACATAACCCCGGCGACTAAACGCCGCCGGGGATTTATTTTATTTCTTCAGTTCAGCCAGGCTTAACCAGGTTTGCACCACGGTGTCCGGGTTCAGAGACAGGCTATCGATCCCCTCTTCCATCAACCATGCGGCAAAGTCTTCGTGGTCGGACGGACCCTGACCGCAAATCCCGACATATTTGCCCTGTTTCTTCGCGGCACGGATAGCCATGCTCA‑GCAGTGCTTTCACCGCATCGTTGCGCTCATCGAACAATTCAGACACCACGCCGGAGTCACGGTCCAGACCGAGCGCCAGCTGCGTCATATCGTTACTGC‑CAATACTGAAGCCGTCGAAATATTCGAGGAACTGCTCGGCCAGCAAGGCGTTGGACGGGATTTCACACATCATGATGATTTTCAGCCCGTTCTCGCCACGTTTCAGCCCCTGACGCGCCAGTTCTTCAACCACCGCTTTCGCCTGATCTACGGTACGCACGAACGGGATCATGATCT  >  CP042583/1466587‑1467139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A