Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F210 I1 R1
|
4928 |
368.7 |
6392010 |
97.5% |
6232209 |
231.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,806,275 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,806,275 | 0 | A | T | 100.0%
| 701.9
/ NA
| 294 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (160/134); total (160/134) |
| * | CP042583 | 1,806,276 | 0 | G | C | 99.7%
| 691.7
/ NA
| 294 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (160/133); minor base A (0/1); total (160/134) |
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,806,277 | 0 | T | A | 99.3%
| 699.6
/ NA
| 294 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (159/133); minor base C (1/1); total (160/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 294 total aligned reads displayed.
CCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAAAGCATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTAGTCCGGAAATCGCCGCGAGTATCCTGCCGAAAAGTGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCAGCCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTTAGTAGCCTAGCGCTGGTG > CP042583/1806015‑1806556
|||
ccTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTTAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGcc > 1:1062464/1‑289 (MQ=255)
ccTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGcc > 2:694352/1‑289 (MQ=255)
ccTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTCACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGc > 2:2877798/1‑288 (MQ=255)
ccTTGCTTAAACCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGcc > 1:1862387/1‑289 (MQ=255)
cGTTGCTGGTAGCAATGGTGGTTATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGaaatcagtcac < 2:83421/289‑9 (MQ=255)
cGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTCACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGaaatcagtcac < 1:2877798/289‑9 (MQ=255)
gTTGCTGGTAGCAATGGTGGTGATCATTCCGTTTTTAATGCTGACTGGAATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTAGCCTTTATATGAGCAGCTACACCAGAGCGGCGCGCGCTGGAAATCGATCATCACCATCGGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGGGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTcacc < 2:1828945/289‑1 (MQ=255)
tggtgATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGc > 1:580193/1‑289 (MQ=255)
ggtgATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCg > 1:376046/1‑289 (MQ=255)
gtgATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCgg > 1:1898324/1‑289 (MQ=255)
gATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTTAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGt < 2:1062464/288‑1 (MQ=255)
cATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTggc < 2:580193/289‑1 (MQ=255)
aTTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTggcg < 2:2292286/289‑1 (MQ=255)
ttCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGTAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTggcg > 1:1252277/1‑288 (MQ=255)
tCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATcgc < 2:2464969/234‑1 (MQ=255)
ttttAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTAt > 2:1551198/1‑289 (MQ=255)
aCTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTAtt > 1:1607653/1‑288 (MQ=255)
tGGGATCTCGTGCGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGAGCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCg < 2:2918521/289‑1 (MQ=255)
tGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCg < 2:1251036/289‑1 (MQ=255)
ctTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAg < 2:1607653/289‑1 (MQ=255)
gCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGTTGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCCCCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTg > 1:1802854/1‑289 (MQ=255)
gCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCcgcgtcaatc > 1:1152072/1‑203 (MQ=255)
gCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCcgcgtcaatc < 2:1152072/209‑7 (MQ=255)
gCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGttt > 1:2175337/1‑288 (MQ=255)
gCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGttt > 1:2509659/1‑288 (MQ=255)
aGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTtcgtcg > 1:315326/1‑289 (MQ=255)
gCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACg < 2:652363/215‑1 (MQ=255)
gCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACg > 1:652363/1‑215 (MQ=255)
gCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTTGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCt < 2:891415/288‑1 (MQ=255)
accGATCGGCTTCAACCGGGGGCCGGCGCGCTGGCCTATCCGTTCTATGAGCGGCTACACCGGATCCGCTCGCGCTGTAAATCGATCATCACCATCTGGTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGgcg < 2:2356260/287‑1 (MQ=255)
aaCGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCATTCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGgcg < 2:1260693/289‑1 (MQ=255)
tCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTa > 2:922280/1‑289 (MQ=255)
tCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTa > 2:1319458/1‑289 (MQ=255)
tCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTa < 1:1327115/289‑1 (MQ=255)
tCTGCTGCAACCGGCGGTCGTCGCGCTGCCCTACCCTTCATATTACCAGATACACCAGATACGCGCGCTCCGGCAATCGGTCGTCACCCTCTGTTTTACCGGCAGCGTGGCTGTGATGATGACGGGGACTTCCGTTGCATTGCTGATGGTCGCCTCACCGATATTCGTCGTGTCAATCTTGCCCAAATACGTCCCCCCGCCTACTCCAACGCTAGTTGGCGGCATTATTTGCGGACTTCCCGCAAC‑TATCGGACTTAGCGTGTTTTTTGTAGGAATCCACGGCGCGGtc > 2:1871983/1‑288 (MQ=255)
tgctgcAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCg > 1:3025545/1‑239 (MQ=255)
tgctgcAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCg < 2:3025545/239‑1 (MQ=255)
gggattctgcgcgTTGGCATATCCTTTAGATGAGCAGCTACACCAGATCCGCGCGAGGTGGAAAGCGGTCAGCCCCATAGGTTTTATCAGCAGCGTGTTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCTGAAAACGCAGCGTCAATCCTGCCGAAATCAGGCACCACGCCTAGTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGGTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATAc < 2:1802854/279‑1 (MQ=255)
gcggTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGCGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATAGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATTGCGGTTTGCGGCAGTACTGGAGGTATTCCGGCACTCCACCGC‑GGTTGAGGGAGTTTCGGCGGCATCCCTGGCCAGGTATTTGGCCCTACAt > 2:1406304/1‑289 (MQ=255)
gcggTCGACGCGTTAGCCTTTCCTTTATATGGGCGGCTAACCCGGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGGGGTGGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACa < 2:2530760/288‑1 (MQ=255)
cggTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCTGCAAT‑CAGCGCAGTTTCCGTGATTTTCGTCGGCATCCTCGCAGCGGCAGCTGGCCATACttt > 2:932599/1‑289 (MQ=255)
cggTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACAtt > 1:465610/1‑289 (MQ=255)
gcgcTGGACTATCCTTTATATGGACAGCTGCACCAGGTCCGCGCGAGCTGGAAATCGATCATCACCATCTGTGTTATCGTCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGTTGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAatg < 2:1862387/289‑1 (MQ=255)
tCCTTTATATGAGCAGCTACCCCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTAtt < 1:2901292/289‑1 (MQ=255)
tCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGgcg > 2:796444/1‑251 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGTCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTa > 1:721171/1‑288 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGgcg < 1:1267946/246‑1 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTAtt < 1:2452763/253‑1 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTgg > 1:2191146/1‑256 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGcc < 1:1009629/258‑1 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGcc > 2:1009629/1‑258 (MQ=255)
tataTGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTa > 1:874674/1‑288 (MQ=255)
tatGGGCACCTACACCAGATCGGCGGTGGCTGGAAATCGATCATCACCATCGGTTTTTTCGGCGGGGTGGTTGCGATGGTGACGGGGACTTCCGGGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCa < 2:2016999/289‑1 (MQ=255)
gAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGcc > 1:357026/1‑158 (MQ=255)
agcagcTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCaaa > 1:432636/1‑287 (MQ=255)
gcagcTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCaaa > 1:9242/1‑286 (MQ=255)
gcagcTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCaaa > 1:1159742/1‑286 (MQ=255)
tgtacCAGATCCTGGCGCGCTGGAACACGATCATCACCTTCTGTTTTGTCGGCAGCGTGGTTGCGATGGTGACGGGGCCTTCCGTGGCATTGTTGTTGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg < 2:412926/286‑1 (MQ=255)
acCAGATCCGCGCGCGCTGGAAATCGTTCATCCCCATCTGTTTTATCGGCAGCGGGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTAcc < 2:2819531/275‑1 (MQ=255)
acCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCgg < 2:376046/289‑1 (MQ=255)
gATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTg > 1:2520499/1‑289 (MQ=255)
agccGCGCGCGGTGGAAATCGAGCATCACCATCTGGTTTGTCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTg < 2:2175337/286‑1 (MQ=255)
aTCCGGGCGCTCTGGAAATAGAGAAGCACCACCTGGTTTACGTGCGGGGTGGTTGCGATGGTGCCGGGGACTTCCGTGGAATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTg < 2:1374191/288‑1 (MQ=255)
tCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGcc > 1:2582992/1‑142 (MQ=255)
tCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGc > 1:1413676/1‑289 (MQ=255)
gcgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAAt > 1:970100/1‑289 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTAt < 1:1999508/141‑1 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCt > 1:62949/1‑216 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCt < 2:62949/216‑1 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATCCCTTGCTTAATGCGATGCGTATTCGTACCAAAGCTTCGCGCGGTCTGGCaagg > 2:986879/1‑287 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg > 2:2423100/1‑276 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg < 1:2423100/276‑1 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgc > 1:2819531/1‑275 (MQ=255)
cgcgcgcTGGAAATCGATCATCACCATCTGTTTTATCAGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACa > 1:1750217/1‑238 (MQ=255)
gctcagcaCCATCTGTTTTATCGGCAGCGTGGTTGCGCTGGTGACGGGGACTCCCGTGGCATTGTTGATGGGCTCTTCACCGGAAAGCGCGGCGTCAATCCTGCCGAAATCAGTAACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTgcctcgca < 2:423917/286‑6 (MQ=255)
gatcatcACCGTCGGTTTTGTCGGCGGCGTGGTTGCGAGGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTgcctcgcac < 2:1937950/288‑7 (MQ=255)
catccCCTTCTGTTTTTTCGGCGGCGTGGTTGCGATGGGGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGcc < 2:2593759/289‑1 (MQ=255)
tCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAAt < 2:757266/121‑1 (MQ=255)
cTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTAtt < 1:1733426/232‑1 (MQ=255)
cTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTAtt > 2:1733426/1‑232 (MQ=255)
ttATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTa > 1:2769894/1‑141 (MQ=255)
aGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACa > 1:761196/1‑198 (MQ=255)
aGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg > 1:2594851/1‑236 (MQ=255)
aGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCg > 1:204388/1‑289 (MQ=255)
aGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCg > 2:1186749/1‑289 (MQ=255)
tGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGAt < 1:416135/289‑1 (MQ=255)
tGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg < 1:152809/220‑1 (MQ=255)
ggACGGGGAGTTCCTTGGAATTGTTTATGGGCGCTTCACCGGAAATCGCGCCGTAAATCCTTCCGAATTCAGTGACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTGCGGCAAT‑CAGCGGAGTTTGCGTGAGTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAgg < 2:2724143/287‑1 (MQ=255)
tCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTta < 1:23608/289‑1 (MQ=255)
tGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTtagttc > 1:1034235/1‑287 (MQ=255)
gCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAatg < 1:1198849/175‑1 (MQ=255)
cATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTTACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTtagttcgc < 1:1568074/288‑5 (MQ=255)
ttgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCTGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcg > 2:4414/1‑200 (MQ=255)
ttgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGgcg > 1:796675/1‑145 (MQ=255)
gttgATGGGCGCTTCACCGGAAATCGCCGCGTCGATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCt < 1:232325/165‑1 (MQ=255)
gttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCCGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCCTACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCCCGCCCTCGGTACGGCGGGCTGCCCCGAGCTGGATTATCAGGAAGGTGCATTtagttcgttagc > 2:3168670/1‑280 (MQ=255)
ttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCCCTCCGCCGAGCTGGATTATCGGGACGGTGCAttgatttcgctagcc > 2:340802/1‑275 (MQ=255)
gggCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAatgcgatgc > 1:208140/1‑170 (MQ=255)
gggCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAatgcgatgc < 2:208140/170‑1 (MQ=255)
gggCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCCCGCCCTCGGTACGGCGCGCTGCGCCGAGCCGGATTATCAGGACGGTGCCTTTAGTTGGCTAGCGCTGgtg > 2:175013/1‑289 (MQ=255)
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CCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAAAGCATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTAGTCCGGAAATCGCCGCGAGTATCCTGCCGAAAAGTGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAAT‑CAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCAGCCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTTAGTAGCCTAGCGCTGGTG > CP042583/1806015‑1806556
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
