Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,807,358 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,807,3580AT99.5% 886.6 / NA 373intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (186/183);  minor base C (2/0);  total (188/185)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,807,3590GC99.7% 885.2 / NA 373intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (188/184);  minor base A (0/1);  total (188/185)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,807,3600CG100.0% 884.1 / NA 373intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (188/185);  total (188/185)

Only 100 of 373 total aligned reads displayed.

CCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTAGCCACATGCCTTACA‑GTAAGAGCCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTC  >  CP042583/1807086‑1807631
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                
 cTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGACAAACCGTTCGCACATGCCTTACA‑Gt                                                                                                                                                                                                                                                                  <  1:482673/289‑1 (MQ=255)
   ggTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCG‑TAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAACGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGGTATGCGCCTTCCCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACAGGCCTTACC‑GTAag                                                                                                                                                                                                                                                               >  2:2541869/1‑289 (MQ=255)
     ttGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTa                                                                                                                                                                                                                                                                       <  2:2680631/281‑1 (MQ=255)
       gAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcg                                                                                                                                                                                                                                                            <  1:2043072/289‑4 (MQ=255)
         gtggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcgcc                                                                                                                                                                                                                                                          >  2:1539973/1‑284 (MQ=255)
             tgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcgccaag                                                                                                                                                                                                                                                       <  1:2684845/288‑9 (MQ=255)
                 aaaGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGgtg                                                                                                                                                                                                                                                  <  1:2345292/289‑1 (MQ=255)
                       cTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTcgcg                                                                                                                                                                                                                                             <  1:216585/288‑1 (MQ=255)
                         tGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcgcc                                                                                                                                                                                                                                                          <  2:2000873/273‑6 (MQ=255)
                                aTCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTa                                                                                                                                                                                                                                   >  1:1010437/1‑289 (MQ=255)
                                      gTTATCTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACg                                                                                                                                                                                                                             <  1:597100/289‑1 (MQ=255)
                                        tAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCCCGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGTCGGCCAACCGTTCGCACATGCCGTACA‑GTAAGTCCACAAGCGGTGTCTGGCTGGAATGTAAAGACgg                                                                                                                                                                                                                            >  1:2860488/1‑288 (MQ=255)
                                        tAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGt                                                                                                                                                                                                                           <  2:2965568/289‑1 (MQ=255)
                                               acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGa                                                                                                                                                                                                                                        >  2:304553/1‑269 (MQ=255)
                                                 gCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGt                                                                                                                                                                                                                           <  2:430686/280‑1 (MQ=255)
                                                 gCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCCCCAAGCGGTGGCGCCCCGGAATGTAAAGCCCGTCGGAttttt                                                                                                                                                                                                                  >  2:1684536/1‑288 (MQ=255)
                                                   cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTg                                                                                                                                                                                                                                          >  1:377793/1‑263 (MQ=255)
                                                   cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTg                                                                                                                                                                                                                                          <  2:377793/263‑1 (MQ=255)
                                                    ttGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGt                                                                                                                                                                                                               <  1:1123324/289‑1 (MQ=255)
                                                          tCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCaa                                                                                                                                                                                                          <  1:775003/288‑2 (MQ=255)
                                                                 cGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcgccaag                                                                                                                                                                                                                                                       >  1:2381991/1‑228 (MQ=255)
                                                                 cGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTg                                                                                                                                                                                                  >  1:1317950/1‑289 (MQ=255)
                                                                      gTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGa                                                                                                                                                                                                                               >  2:90936/1‑255 (MQ=255)
                                                                      gTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGa                                                                                                                                                                                                                               <  1:90936/255‑1 (MQ=255)
                                                                          atgaatgaACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTCAAACGCAGCTGATGGCCGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCTGCGGCCAACCGTCCGCACATGCCTTAAA‑GCAAGTCGCCAAGCGGTGTCGCGCTGGAAGGTCAAGACTGCCGTATTTTCAGTGGCAGGTACCCGGAAAAcgccg                                                                                                                                                                                         >  2:497411/1‑289 (MQ=255)
                                                                           tgaatgaaCTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGgtg                                                                                                                                                                                                                                                  >  1:1972071/1‑231 (MQ=255)
                                                                                 aactgaacACCGGCCTGGAACTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCTCTGCGTGACTATGCGCCAGCTGCCTTTGGGCCGAACGATCTCGACATTAAAACGCTGCTGATGGCCGCACCGGATCACGGCTACGCGCTGACGGTGGCTGCGCTTTCTCCGGCGGCGACTCCGGCGGCCACCCGTCCGCTCATGCCTTACA‑GTAAGTCGCCAAGCGGTTTCGCCCTGCTATTAAAATACGGTCGGATTGTCAGGGGCCGCTTCGCCGACAAccccggcttgc                                                                                                                                                                                   >  2:1745832/1‑282 (MQ=255)
                                                                                           cGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGCACAGGATCACGGCTATGCGATGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTTTCCCCCTGGAATGTAAAGCCGGTCGTCTTTTCATTGGCAGCTACGCTGAAAACGCCGACTGAAACCCGActca                                                                                                                                                                         >  2:2893376/1‑287 (MQ=255)
                                                                                           cGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAAccc                                                                                                                                                                               >  1:2096666/1‑282 (MQ=255)
                                                                                             gTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGc                                                                                                                                                                       <  2:2095959/288‑1 (MQ=255)
                                                                                              tCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGcc                                                                                                                                                                      >  2:1927966/1‑288 (MQ=255)
                                                                                               gtgcagcttggTATTCATCTGACGGGCCGGGAGGCGCACGCGCTGCGTGACTATCTGCCAGCTGCGGTGAGGCCGAAGGATCTGGAAATTAAAACGCTGCTGATGGAGGAACAGGATCACGGCTATGCGCTGACGGGTGATGTGCTTTCTCAGGCAGCGATGGCGGCGGCAAACCGTTCGCACATGCCTTGCA‑GTAAGTTGCCAAGCGGTTTCGCGCTGGAATGTTAAGACGGTCGTATTTTCAGTTGCAGCTACGGTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     <  2:670004/278‑1 (MQ=255)
                                                                                               cTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     <  2:776545/288‑1 (MQ=255)
                                                                                                tGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCAcc                                                                                                                                                                   >  1:1156183/1‑289 (MQ=255)
                                                                                                        cGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGa                                                                                                                                                                                                                               >  2:587073/1‑221 (MQ=255)
                                                                                                        cGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCAcc                                                                                                                                                                   >  2:3099383/1‑281 (MQ=255)
                                                                                                         gTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAggg                                                                                                                                                          <  1:1853795/289‑1 (MQ=255)
                                                                                                          tATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑Gt                                                                                                                                                                                                                                                                  <  2:1390342/184‑1 (MQ=255)
                                                                                                            ttCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGc                                                                                                                                                       >  1:2596815/1‑289 (MQ=255)
                                                                                                               aTCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGGATTTTCAGTGGCAGCTACGCTTAAAAAGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGtt                                                                                                                                                    >  1:1294996/1‑289 (MQ=255)
                                                                                                                  tGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     >  1:1625826/1‑269 (MQ=255)
                                                                                                                        gCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     <  1:2013253/263‑1 (MQ=255)
                                                                                                                          ctcgAGGCACCCGCGTTGAGGGACTATCTGCAAGATTCCTTTGGGCCACAAGATCTGGAGATTAAAACGCTGCTGCTGGACGAACAGACTCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGa                                                                                                                                         <  2:1294996/287‑1 (MQ=255)
                                                                                                                          cgcgAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGa                                                                                                                                         <  2:1156183/289‑1 (MQ=255)
                                                                                                                              aGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTg                                                                                                                                          <  1:35341/284‑1 (MQ=255)
                                                                                                                              aGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCCGTTg                                                                                                                                          >  2:35341/1‑284 (MQ=255)
                                                                                                                                 cacaCGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAAtctc                                                                                                                                    <  1:2227042/287‑1 (MQ=255)
                                                                                                                                 cacaCGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCa                                                                                                                                   <  2:2596815/288‑1 (MQ=255)
                                                                                                                                   cacGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGc                                                                                                                                                                       >  2:1601468/1‑250 (MQ=255)
                                                                                                                                   cacGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGc                                                                                                                                                                       <  1:1601468/250‑1 (MQ=255)
                                                                                                                                      gcgcTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCAcc                                                                                                                                                                   >  2:2046012/1‑251 (MQ=255)
                                                                                                                                         cTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGa                                                                                                                                                                             >  1:976536/1‑238 (MQ=255)
                                                                                                                                         cTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATg                                                                                                                          >  1:3177507/1‑289 (MQ=255)
                                                                                                                                          tGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGa                                                                                                                         >  2:2845171/1‑289 (MQ=255)
                                                                                                                                           gCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAAtctc                                                                                                                                    <  2:2291809/277‑1 (MQ=255)
                                                                                                                                           gCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGAt                                                                                                                        >  1:722582/1‑289 (MQ=255)
                                                                                                                                           gCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGAt                                                                                                                        >  1:257639/1‑289 (MQ=255)
                                                                                                                                            cGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAagtcgccaag                                                                                                                                                                                                                                                       >  1:420930/1‑153 (MQ=255)
                                                                                                                                              tGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGTTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGt                                                                                                                                            <  1:307105/266‑1 (MQ=255)
                                                                                                                                              gcgttataTGCCACAGGCCTTAGGGCCGGAAGATGTGGAGCTTACAACGCAGCTAATGGACGAACAGAATCACGGCTATGCGCTGCCGGGTGATGCGCTTCCTCGGGCAGCGATGGCGGCGGCAAACCGTTAGCACATGCCTTACA‑GTAATTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGTGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTa                                                                                                                      <  2:1203480/284‑1 (MQ=255)
                                                                                                                                                    tCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGat                                                                                                               >  1:2538835/1‑289 (MQ=255)
                                                                                                                                                    tCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTCCAGGGAGCGTTAATTTTGTTGAAACTCAAGGGTTATGATTACCCGGat                                                                                                               >  2:3073745/1‑289 (MQ=255)
                                                                                                                                                      tGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTa                                                                                                                                                                                                                                                                 <  2:618648/141‑1 (MQ=255)
                                                                                                                                                        ccAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGa                                                                                                                                                                             >  1:2423912/1‑223 (MQ=255)
                                                                                                                                                        ccAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATcc                                                                                                           >  1:519963/1‑289 (MQ=255)
                                                                                                                                                         cAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCa                                                                                                          <  1:2479077/289‑1 (MQ=255)
                                                                                                                                                           gATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGc                                                                                                                                                                       <  1:636850/226‑1 (MQ=255)
                                                                                                                                                              gCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTGTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCTCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCGACGCTGAAACCGCCGCATTCAACCCGACTCTGCAACCGTTGCAGGGAGCGTTAATTACGGTTAATCCCAAGCGTTTTGAATCCCCGGATCTCCAgcgc                                                                                                      >  2:866391/1‑288 (MQ=255)
                                                                                                                                                                          aaaGATCTGGAGATTAAAACGCTGCTGATGTACGAACAGGATCACGGCTATGCGCTGACGGATGCTGCGCATTCTCAGGCAGCGATTCCGGCGGCGAACCGTTCGCACATGCCTTACA‑GTAAGTACCCAAGCCGTGTCGCGCTGGACTGTAAATGCGGCCGTAGTTTCAGTGGCAGCTCCACTCAATACGTCAGCTTCTACCCGACTCCGCCACCATTGCTAGGAGCGTTAAGTCTGTTGAATCCCAATGTTTATGATTACCCTTATAACCATCGCGCGGTTCTGGcgg                                                                                         >  2:2235633/1‑287 (MQ=255)
                                                                                                                                                                          aaaGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGTTGTCGCGCTGGAATGTAAAGACGGGCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCCTTGCAGGGAGCGTTAATTCTGTTTAATCTCAAGGGTGATGTGTACCCGGATATCCAGCGCGCGGTCCTGGCAg                                                                                         >  2:1111472/1‑289 (MQ=255)
                                                                                                                                                                           aaGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGa                                                                                        >  1:3084748/1‑289 (MQ=255)
                                                                                                                                                                               tCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGa                                                                                                                                                                                                                               >  1:2798287/1‑150 (MQ=255)
                                                                                                                                                                                      aTTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGAt                                                                              <  1:2952342/288‑1 (MQ=255)
                                                                                                                                                                                        tAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     >  1:567995/1‑199 (MQ=255)
                                                                                                                                                                                         aaaaCGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATgcgc                                                                          <  1:22690/289‑1 (MQ=255)
                                                                                                                                                                                                tgctgATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAAtctc                                                                                                                                    <  2:105404/224‑1 (MQ=255)
                                                                                                                                                                                                      tGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGt                                                              <  1:933000/288‑1 (MQ=255)
                                                                                                                                                                                                                           aTGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGt                                                                       <  2:2383597/258‑1 (MQ=255)
                                                                                                                                                                                                                            tGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     >  2:1443996/1‑163 (MQ=255)
                                                                                                                                                                                                                            tGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTg                                                                                                                                          <  1:1506644/190‑1 (MQ=255)
                                                                                                                                                                                                                            tGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCa                                                                                                                                   >  2:2179892/1‑197 (MQ=255)
                                                                                                                                                                                                                            tGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTC‑CGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAggg                                                                                                                               >  1:1697342/1‑200 (MQ=255)
                                                                                                                                                                                                                               gcTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGaa                                     <  2:2347360/288‑1 (MQ=255)
                                                                                                                                                                                                                                 tGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAg                                   >  2:2786634/1‑288 (MQ=255)
                                                                                                                                                                                                                                   aCGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTgg                                                                                                                                                                                                                                         <  2:938231/88‑1 (MQ=255)
                                                                                                                                                                                                                                   aCGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAAc                                                                                                                                                                                 <  2:1810258/144‑1 (MQ=255)
                                                                                                                                                                                                                                   aCGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAAc                                                                                                                                                                                 >  1:1810258/1‑144 (MQ=255)
                                                                                                                                                                                                                                      ggTGCTGCGCTTGGTGGGGGAGCGATTGCGCGGGCAAACCGGGCGCACATGCCTGACA‑GTAAGTCGCCAGGCGGGGTCGCGCTGGAATGTAAAGACGGTCGTATTTGCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCAAACGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCtctc                              <  2:323085/288‑1 (MQ=255)
                                                                                                                                                                                                                                      ggTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGtt                                                                                                                                           <  2:2430710/179‑1 (MQ=255)
                                                                                                                                                                                                                                      ggTGAGGCGCTGCCTCAGCCGGCGATTTCGCGGTGAAACCGTTCGCACATGCC‑TACACGTAGGTGGCCAACGGGTGTCTCGCTGGCATGTAAAGGCGGTCGTATTTTCAGTGGCAGCTACGGTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTAGGATTACCCGGATATCCAGCGCGGGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCtctc                              <  2:1863412/288‑1 (MQ=255)
                                                                                                                                                                                                                                        tGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCa                                                                                                                                   >  2:2513013/1‑185 (MQ=255)
                                                                                                                                                                                                                                         gagttgcttttccgggcggcGATGGGGGCGGAAAACCTTTCGAACATGCCTTACA‑GTTAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGc                           <  2:74951/274‑1 (MQ=255)
                                                                                                                                                                                                                                         gATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGc                           <  1:1888706/288‑1 (MQ=255)
                                                                                                                                                                                                                                         gATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGc                           <  1:2845171/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cgcTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGaaaa                                                                                     <  1:832281/226‑1 (MQ=255)
                                                                                                                                                                                                                                             cgcTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGc                                                       <  1:740294/256‑1 (MQ=255)
                                                                                                                                                                                                                                                  tctcAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTgg                                                            >  2:556488/1‑246 (MQ=255)
                                                                                                                                                                                                                                                          aGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTca                      <  2:974939/276‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGATTGCGGCGGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCa                                                                                                                                                                     >  1:1401973/1‑131 (MQ=255)
                                                                                                                                                                                                                                                                 gcggcgGCAAACCGTTCGCACATGCCTTACA‑GTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTtc  <  1:2992835/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                
CCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTAGCCACATGCCTTACA‑GTAAGAGCCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTC  >  CP042583/1807086‑1807631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A