Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,813,384 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,813,3840GC100.0% 930.1 / NA 387intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (192/195);  total (192/195)
*CP0425831,813,3850CG99.7% 920.1 / NA 387intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (191/195);  minor base T (1/0);  total (192/195)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,813,3860TA99.7% 916.5 / NA 387intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (192/193);  minor base C (0/1);  total (192/195)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 387 total aligned reads displayed.

TAAACCAACTTTATTTTTGTAGTTGCGAATATTGGAAATTAAGCTGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTACTGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCGCTTTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAAGCTGACAT‑CGCGAATGCTCGGCTGGCGCAGACTCGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGGCTGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAA  >  CP042583/1813105‑1813661
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
 aaaCCAACTTTATTTTTGTAGTTGCGAATATTGGAAATTAACGAGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTCTGCAGATCAAACGAGACAT‑cgc                                                                                                                                                                                                                                                                             >  1:1422473/1‑289 (MQ=255)
     cAACTTTATTTTTGTAGTTGCGAATATTGGAAATTAACGAGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGaa                                                                                                                                                                                                                                                                          >  1:2419323/1‑288 (MQ=255)
       aCTGTATTTGTGTATATGCGAATATTGGAAAGTAAAGAGTTAACACCAATATCCAGATAGGCATAACTTCCCGTTGAGCGACACTCCTCAGTTACCAGTGCAAATCCATGTTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAAtcg                                                                                                                                                                                                                                                                       <  2:674851/289‑3 (MQ=255)
           tATTTTTGTAGTTGCGAATATTGG‑AATTAACGAGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAAtcgacggc                                                                                                                                                                                                                                                                  <  2:2312393/289‑8 (MQ=255)
             tttttGTAGTTGCGAATATTGGAAATTAACGAGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑AGCGAAtcgacg                                                                                                                                                                                                                                                                    >  1:829626/1‑281 (MQ=255)
                       tGCGAATATTTGAAATTAACGAATTAAAACCCATACCCGGATAGGAATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGGGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGGTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATGT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAgt                                                                                                                                                                                                                                                         <  2:1581334/287‑2 (MQ=255)
                                    aattaacgagTTAAAACCAATATCCAGATAGGCATACATGCCCGTTGGGCGGCGCTCCTCAGTTACCAGTTCAAATCCATGGTTTATGGCTTCGTTTGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGt                                                                                                                                                                                                                                          <  2:1357334/280‑1 (MQ=255)
                                    aattaacgagTTAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACg                                                                                                                                                                                                                                           <  1:1097024/279‑1 (MQ=255)
                                               tAAAACCAATATCCAGATAGGCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAgg                                                                                                                                                                                                                                 <  1:1995616/287‑1 (MQ=255)
                                                                   gCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCCGTGACGGCCGGTTACGTACCTCGAGGATGACTTCGCCCGGTGTGtttt                                                                                                                                                                                                           >  2:2190781/1‑289 (MQ=255)
                                                                   gCATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGtttt                                                                                                                                                                                                           >  1:2344893/1‑289 (MQ=255)
                                                                    cATAAATTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGgtttgttt                                                                                                                                                                                                            >  2:610652/1‑287 (MQ=255)
                                                                         aTTCCCGTTGAGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGt                                                                                                                                                                                                     <  1:1197519/289‑1 (MQ=255)
                                                                           tcccgttgagcggcgCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTAGGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGt                                                                                                                                                                                                     <  2:3182628/278‑1 (MQ=255)
                                                                                    gcggcgCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACg                                                                                                                                                                                           <  1:2190781/288‑1 (MQ=255)
                                                                                             ctcAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAaga                                                                                                                                                                                 <  1:2270971/289‑1 (MQ=255)
                                                                                                       aGTGCACCTCCACGGTTTATGGCTTCGTTGGCATCATGGTAATTCCCCTGTTTGTCGTGCAACGGTAACGTGCCAGCCGATTTCTCGCGCATACCAAATAACGCCACAACAATTTCCGTCCGTTTCGCCCCCACCAGACCGGCAATACCGAGCATCT‑CCACTCTATTCAGACCAAACGAAACAT‑CGCGAATCGATGCCTAGCGCATTGGCGTCACGTTACGTACCTCGACGATGACCGCTCCCGGTCTGTCTGCTTTGTCAGGGAAACGCTCGTTAAGCGAACGCCCaa                                                                                                                                                                       >  2:2471695/1‑289 (MQ=255)
                                                                                                       aGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAGCAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACg                                                                                                                                                                            >  1:279782/1‑284 (MQ=255)
                                                                                                       aGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGaa                                                                                                                                                                              <  2:530244/282‑1 (MQ=255)
                                                                                                       aGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGccc                                                                                                                                                                         >  2:1236916/1‑287 (MQ=255)
                                                                                                       aGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGGTACGTACCTCGAGGATGACTTCGCCCGGGTTGTTTTCTTTGTCATGGAAACGGTGGGTACGAGAACGCCCaa                                                                                                                                                                       >  2:2521708/1‑289 (MQ=255)
                                                                                                          gCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGa                                                                                                                                                                                                                                >  2:2292932/1‑229 (MQ=255)
                                                                                                           cAAATCCGTGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGaa                                                                                                                                                                              <  1:2023568/278‑1 (MQ=255)
                                                                                                           cAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACg                                                                                                                                                                                           >  2:1067405/1‑265 (MQ=255)
                                                                                                                   tGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           >  1:1003189/1‑289 (MQ=255)
                                                                                                                   tGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           <  2:829626/289‑1 (MQ=255)
                                                                                                                   tGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           >  1:1225060/1‑289 (MQ=255)
                                                                                                                   tGGTGTATGGGTTGGTTGGCATTATGGTTATTGATCTGTGTGCCGTGGAACGTTATGGTGCCAGCCGATTTATCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCGCCAACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           <  2:2797758/289‑1 (MQ=255)
                                                                                                                     gTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCCCAGTGACGTCAGGTTACGTACCCCGAGGATGACTTCGCCCGGTTTGTTTTCTTTTTCAGGGAAACCCTGGGTAAGAGAACGCCCAACca                                                                                                                                                                    >  2:2023568/1‑278 (MQ=255)
                                                                                                                         aTGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCt                                                                                                                                                     <  1:653467/289‑1 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGccc                                                                                                                                                                                                                     <  2:1209657/218‑1 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACg                                                                                                                                                                                           >  1:743286/1‑244 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACg                                                                                                                                                                            <  2:922185/259‑1 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACg                                                                                                                                                                            >  1:922185/1‑259 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           >  2:1639314/1‑276 (MQ=255)
                                                                                                                                cGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCga                                                                                                                                                           <  1:1639314/276‑1 (MQ=255)
                                                                                                                                   tGGCATTATGGTTATTTATCTGTTTGCCTGGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCg                                                                                                                                            <  1:590550/288‑1 (MQ=255)
                                                                                                                                                aTTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAgtgacgt                                                                                                                                                                                                                                                    >  1:415305/1‑165 (MQ=255)
                                                                                                                                                aTTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAgtgacgt                                                                                                                                                                                                                                                    <  2:415305/171‑7 (MQ=255)
                                                                                                                                                 ttGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTcc                                                                                                                                                <  1:26625/270‑1 (MQ=255)
                                                                                                                                                      cTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCg                                                                                                                        >  1:1069817/1‑289 (MQ=255)
                                                                                                                                                      cTGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCg                                                                                                                        >  2:290537/1‑289 (MQ=255)
                                                                                                                                                       tGTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCgg                                                                                                                       >  1:2302475/1‑289 (MQ=255)
                                                                                                                                                        gTTTGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAagag                                                                                                                                                                                <  2:1429276/231‑1 (MQ=255)
                                                                                                                                                         tttGCCGTGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTATTTGTCAGGGAAACGCTGGTTAAGAGAATGCCCACCCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTctgcg                                                                                                                     >  2:1302032/1‑285 (MQ=255)
                                                                                                                                                                tGCAACGTTATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATc                                                                                                               >  1:1920551/1‑288 (MQ=255)
                                                                                                                                                                       ttATGGTGCCAGCCGATTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGtt                                                                                                                          >  1:3093140/1‑270 (MQ=255)
                                                                                                                                                                               ccagccgatttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTGAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCa                                                                                               >  2:2449485/9‑289 (MQ=255)
                                                                                                                                                                               ccagccgatttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCa                                                                                               >  1:900423/9‑289 (MQ=255)
                                                                                                                                                                               ccagccgatttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCa                                                                                               >  2:309954/9‑289 (MQ=255)
                                                                                                                                                                                 agccgatttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACg                                                                                                                                                                                           >  2:1966237/7‑195 (MQ=255)
                                                                                                                                                                                 agccgatttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACcatc                                                                                                                                                                  >  1:2327782/7‑220 (MQ=255)
                                                                                                                                                                                        ttCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTaa                                                                                      <  1:1266266/289‑1 (MQ=255)
                                                                                                                                                                                                      acagaaCCTCTCAAAAATATGCGTACGGTTCGCCCCCAACAGCCCGGCAATACCGACGATCT‑GCCCTTTAGGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCATGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAAc                                                                        <  2:745817/285‑1 (MQ=255)
                                                                                                                                                                                                       aaTAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAgt                                                                                                                                                                                                                                                         <  2:1748610/111‑2 (MQ=255)
                                                                                                                                                                                                       aaTAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAgt                                                                                                                                                                                                                                                         >  1:1748610/1‑110 (MQ=255)
                                                                                                                                                                                                              tctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTAGGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGAt                                                                >  2:289017/1‑289 (MQ=255)
                                                                                                                                                                                                              tctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGAt                                                                >  2:875450/1‑289 (MQ=255)
                                                                                                                                                                                                               ctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCTCCCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTcc                                                                                                                                                >  1:380556/1‑209 (MQ=255)
                                                                                                                                                                                                               ctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGt                                                                                        <  1:2674158/264‑1 (MQ=255)
                                                                                                                                                                                                               ctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGt                                                                                        >  2:2674158/1‑264 (MQ=255)
                                                                                                                                                                                                               ctcAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGAtt                                                               >  2:2248007/1‑289 (MQ=255)
                                                                                                                                                                                                                  aacaaTATCGGTACTTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACATCATCACATAACTGGAAGATttct                                                            <  1:1866939/289‑1 (MQ=255)
                                                                                                                                                                                                                       tatCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGAt                                                                <  1:2392848/280‑1 (MQ=255)
                                                                                                                                                                                                                       tatCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTATGTCCTGCCAGCGGGTCGGTGGCGACGCACTGACCGACGCGCAATCCGGTAACTTAATCACATAATTGCAAGATCTCTTCCAt                                                       >  2:1454016/1‑289 (MQ=255)
                                                                                                                                                                                                                          cGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCa                                                                                               <  2:3147741/246‑1 (MQ=255)
                                                                                                                                                                                                                          cGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCa                                                                                               >  1:3147741/1‑246 (MQ=255)
                                                                                                                                                                                                                            gTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGccc                                                                                                                                                                         >  2:2850453/1‑170 (MQ=255)
                                                                                                                                                                                                                            gTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGccc                                                                                                                                                                         <  1:2850453/170‑1 (MQ=255)
                                                                                                                                                                                                                              aCGTTTCGGCCCCACAGGGCCGGCAGTACCGCGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                <  2:2658302/289‑2 (MQ=255)
                                                                                                                                                                                                                              aCGTTTCGCCCCCCCCAGACCGGAAATACCGAGGACCT‑CCCCATTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGTGGATGACTTCGCCCGGTTTGTTTTCGTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                <  2:2387757/289‑2 (MQ=255)
                                                                                                                                                                                                                               cGTTTCGCCCCCCCCCGACCGGCAATACCGGTGATCT‑CCCATTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                <  2:3088894/288‑2 (MQ=255)
                                                                                                                                                                                                                               cGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCg                                                                                                                                            >  1:1550698/1‑196 (MQ=255)
                                                                                                                                                                                                                               cGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATcaca                                                                            >  1:2940138/1‑260 (MQ=255)
                                                                                                                                                                                                                               cGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcg                                               <  1:499760/289‑3 (MQ=255)
                                                                                                                                                                                                                               cGTTTAGCCCCTCCCAAACCGGCAGTTCCTCGGATCT‑GCCCTTTATGCAGATCAAACGCGACAT‑CGCGAATCGATGGCTGGCGCTGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCTTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcg                                               <  2:2419323/289‑3 (MQ=255)
                                                                                                                                                                                                                                 tttCGCCCCCACCAGGACGGCAATTCCTGAGATCT‑CCCCCTTAGGCAGAACAAACGAAACATCCGGGATTGC‑AGGCTGGGGGCGTGACGTCAGGGTACGGAACTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcgag                                             <  2:2533525/289‑5 (MQ=255)
                                                                                                                                                                                                                                   tCGCCCCCCCCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcgagat                                           <  1:2521708/289‑7 (MQ=255)
                                                                                                                                                                                                                                     gCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAag                                                                                                                                                                                  >  2:2725616/1‑152 (MQ=255)
                                                                                                                                                                                                                                     gCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAag                                                                                                                                                                                  <  1:2725616/152‑1 (MQ=255)
                                                                                                                                                                                                                                        cccACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcgag                                             <  1:2615381/282‑5 (MQ=255)
                                                                                                                                                                                                                                         ccaccaGACCGGCACAGCCGAGGAGCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAAc                                     <  2:2335661/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aCCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATAcc                               >  1:2993248/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  cGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGTGAACTTCATCACATAACTGGAAGATTTCTTCCCTTTTATGCGAAATATAAACaaactgcc                             >  2:2615381/1‑282 (MQ=255)
                                                                                                                                                                                                                                                     cAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGt                                                                                        <  1:3101095/226‑1 (MQ=255)
                                                                                                                                                                                                                                                     cAATACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                >  2:1916989/1‑265 (MQ=255)
                                                                                                                                                                                                                                                     cAATACCGAGGATCT‑CCCCTTTAGGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATcaca                                                                            <  2:1108680/238‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaTACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCcg                        <  1:2544265/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        tACCGAGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTAGGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCcgcg                      <  1:289017/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             aGGATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGccc                                                                                                                                                                         <  1:676172/137‑1 (MQ=255)
                                                                                                                                                                                                                                                              ggATCT‑CCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                >  1:1337841/1‑256 (MQ=255)
                                                                                                                                                                                                                                                                  ct‑cCCCTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAAt            <  1:2070175/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ccccTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACg                                                                                                                                                                                           >  2:2975242/1‑112 (MQ=255)
                                                                                                                                                                                                                                                                     ccccTTTATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTGAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAAttt          <  1:2449485/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcgag                                             <  2:576140/248‑5 (MQ=255)
                                                                                                                                                                                                                                                                           tATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgcgag                                             >  1:576140/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                           tATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATgc                                                >  1:2471259/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                           tATGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGaat    >  2:2065764/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             tGCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGaataa  <  1:1503511/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gCAGATCAAACGAGACAT‑CGCGAATCGACGGCTGGCGCAGTGACGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGCGAGATATAAACAATACCGCAGCCGCGCTCTTTTAAttt          >  1:143295/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
TAAACCAACTTTATTTTTGTAGTTGCGAATATTGGAAATTAAGCTGTTAAAACCAATATCCAGATAGGCATAAATTCCCGTACTGCGGCGCTCCTCAGTTACCAGTGCAAATCCATGGTTTATGGCTTCGTTGGCATTATGGTTATTGATCTGTTTGCCGTGCAACGTTATGGTGCCAGCGCTTTTCTCGCGAATACCAAATAACGTCTCAACAATATCGGTACGTTTCGCCCCCACCAGACCGGCAATACCGAGGATCT‑CCCCTTTATGCAGATCAAAGCTGACAT‑CGCGAATGCTCGGCTGGCGCAGACTCGTCAGGTTACGTACCTCGAGGATGACTTCGCCCGGTTTGTTTTCTTTGTCAGGGAAACGCTGGTTAAGAGAACGCCCAACCATCATGGCGATGATCTTGTCCATCGTCAGTCCTGCCAGCGGTTCGGTGGCGATCCACTGACCGTCGCGCAATACGGTAACTTCATCACATAACTGGAAGATTTCTTCCATTTTATGGCTGATATAAACAATACCGCAGCCGCGCTCTTTTAATTTACGAATAA  >  CP042583/1813105‑1813661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A