Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,925,899 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,925,8990AT100.0% 654.5 / NA 274intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (138/136);  total (138/136)
*CP0425831,925,9000GC99.3% 642.3 / NA 274intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (137/135);  total (138/136)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,925,9010CG100.0% 650.6 / NA 274intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (138/136);  total (138/136)

Only 100 of 274 total aligned reads displayed.

GGTCAAAGCGCACTGCATTTCAGTTCCGGAAGCCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTAGCCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTAGCTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCTGCGAAATGAT  >  CP042583/1925623‑1926176
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                   
ggTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTc                                                                                                                                                                                                                                                                            >  2:1603500/1‑288 (MQ=255)
 gTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTcc                                                                                                                                                                                                                                                                           >  1:455536/1‑288 (MQ=255)
      aGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCCCTCTGCGCGCTACCTGGCTAAGTTCGCCAGAAGTCCCCggtc                                                                                                                                                                                                                                                                     >  2:3008778/1‑286 (MQ=255)
          cACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGcc                                                                                                                                                                                                                                                                 >  1:822363/1‑289 (MQ=255)
                      catccggatcgcTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaa                                                                                                                                                                                                                                                     <  1:2779141/278‑1 (MQ=255)
                       atccggatcgcTGGATTTGGTGAGCCATCTGCCATATGGTCAACCGGTGACAGACATTCACAGTGGACTGAAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaag                                                                                                                                                                                                                                                    <  1:1957169/279‑1 (MQ=255)
                       atccggatcgcTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaag                                                                                                                                                                                                                                                    <  1:732670/279‑1 (MQ=255)
                         ccggatcgcTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaagaa                                                                                                                                                                                                                                                  <  1:1255658/281‑1 (MQ=255)
                              tcgcTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCcgcg                                                                                                                                                                                                                                                       <  1:2267561/276‑1 (MQ=255)
                                    gacttGCTGTGCCATCTGCCAGGTGGTCAACAGTGTACAGACATTCACACTGGACTGGAATCTTGGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTa                                                                                                                                                                                                                                        <  2:1544298/285‑1 (MQ=255)
                                         gCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCcgcg                                                                                                                                                                                                                                                       >  2:1064696/1‑268 (MQ=255)
                                          cTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCCGCACTCTGCCCTCTCCCTGGCTAAGTTCGCCAGAAGTTCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGATGTGGGaa                                                                                                                                                                                                                                 >  2:647802/1‑289 (MQ=255)
                                               ccATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGc                                                                                                                                                                                                                            >  1:2545161/1‑289 (MQ=255)
                                                cATATGCCAGATGGTCAACCGGTGACAGAAATTAGCAGTGGACTGGAATCTTTCGGTAAGAAGGCACAAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCg                                                                                                                                                                                                                           <  2:734775/289‑1 (MQ=255)
                                                         gATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGTGGCCTGATgg                                                                                                                                                                                                                  >  1:163140/1‑289 (MQ=255)
                                                              tCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGAttt                                                                                                                                                                                                              >  1:2090091/1‑288 (MQ=255)
                                                              tCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGGAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTCTAGGGGGAATTAGCGGCATGATGGGttt                                                                                                                                                                                                              >  2:1217750/1‑288 (MQ=255)
                                                                  ccGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGACggggacttctg                                                                                                                                                                                                         <  2:485584/289‑10 (MQ=255)
                                                                        acagacaTTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTa                                                                                                                                                                                                                                        >  1:2196872/1‑252 (MQ=255)
                                                                            acaTTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGAt                                                                                                                                                                                                                    <  2:317806/268‑1 (MQ=255)
                                                                                      tGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCagcttcg                                                                                                                                                                                     >  1:1301802/1‑286 (MQ=255)
                                                                                      tGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCagcttcg                                                                                                                                                                                     >  2:742439/1‑286 (MQ=255)
                                                                                       ggACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCagcttcg                                                                                                                                                                                     <  1:754620/288‑4 (MQ=255)
                                                                                        gACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCagcttcgtt                                                                                                                                                                                   >  2:111503/1‑284 (MQ=255)
                                                                                        gACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGAGGGATTTTCAGGCGCACCTTGCGGGagcttcgtt                                                                                                                                                                                   >  1:1386281/1‑284 (MQ=255)
                                                                                              aaTCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGGCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGCTTTTCAGGTGCACCTTGCGGCacgctcgttgcgtgc                                                                                                                                                                             >  2:2043126/1‑275 (MQ=255)
                                                                                                  tttGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTc                                                                                                                                                                         >  2:1363946/1‑289 (MQ=255)
                                                                                                  tttGCGTCACCAGGCCCCCGCCCAACCTTGCTCCCTCCTCGAGCCACCACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTc                                                                                                                                                                         <  2:2360388/289‑1 (MQ=255)
                                                                                                    tGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTc                                                                                                                                                                                                                                                                            <  2:2104672/188‑1 (MQ=255)
                                                                                                       gTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGcc                                                                                                                                                                     <  1:1752699/288‑1 (MQ=255)
                                                                                                                           ccTTACCCCCTCCTCGAGCCCAAAGGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAAc                                                                                                                                                        <  2:2660436/281‑1 (MQ=255)
                                                                                                                               aCTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaag                                                                                                                                                                                                                                                    <  1:2711967/185‑1 (MQ=255)
                                                                                                                               aCTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGcc                                                                                                                                                                     >  2:2283691/1‑264 (MQ=255)
                                                                                                                                cTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATaga                                                                                                                                            >  1:973552/1‑288 (MQ=255)
                                                                                                                                cTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATaga                                                                                                                                            >  1:1209830/1‑288 (MQ=255)
                                                                                                                                 tCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATaga                                                                                                                                            >  2:1979091/1‑287 (MQ=255)
                                                                                                                                   ccTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAg                                                                                                                                                                                                                                       >  2:145120/1‑194 (MQ=255)
                                                                                                                                      tctcGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCCGGCCTTAATCGCTGAAAGCGGTGCGCAATTTCAGGGCAGCGTACAACTTCCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCCGGCTAAGTTCGCCAGAAGTACCCGTCTGGCCGCTGCACGCGAAGAACATATGTGTAGTGGCAATTAGCGGCCTGATTGATTTTCAGGCTCACCTTGCGTCAGCTCCGTTGCGTGAACTCGGCCTTGCCGTTGAATCCCCAGAAACAGAGcgcgcg                                                                                                                                     >  2:1525502/1‑284 (MQ=255)
                                                                                                                                      tctcGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATAtgtg                                                                                                                                                                                                                                          <  2:580026/188‑1 (MQ=255)
                                                                                                                                      tctcGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCg                                                                                                                                     <  1:1979091/289‑1 (MQ=255)
                                                                                                                                        tcGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCtt                                                                                                                                                                   <  1:2504477/257‑1 (MQ=255)
                                                                                                                                        tcGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGa                                                                                                                                   <  1:2300693/289‑1 (MQ=255)
                                                                                                                                        ccgggCCAAAACGCGTGCTCGATCTCGCTTGCCAGGGGCAGGCATTAATCGCTGAAGGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGa                                                                                                                                   <  2:1767713/285‑1 (MQ=255)
                                                                                                                                             ccACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTgg                                                                                                                              >  2:831408/1‑289 (MQ=255)
                                                                                                                                             ccACAACGCGGGCTGGATCTCGCTTGCCGGGCGCAGGCATTAATGGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTgg                                                                                                                              <  2:1181462/289‑1 (MQ=255)
                                                                                                                                                 aaCGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCCGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCgg                                                                                                                                                                                             <  2:2486788/222‑1 (MQ=255)
                                                                                                                                                  tggcgGGCTCGTTCCAGCTGGCCAGGCGCAGGTATTAATCGATGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCGGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGAtgtg                                                                                                                         <  2:328543/287‑1 (MQ=255)
                                                                                                                                                  acgcgtggtacgtctcGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGAtgtg                                                                                                                         <  2:973552/277‑1 (MQ=255)
                                                                                                                                                      gTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGtgctgc                                                                                                                     >  2:1003236/1‑289 (MQ=255)
                                                                                                                                                        gCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaa                                                                                                                                                                                                                                                     <  1:885568/159‑1 (MQ=255)
                                                                                                                                                        gCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaa                                                                                                                                                                                                                                                     >  2:885568/1‑159 (MQ=255)
                                                                                                                                                        gCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTgcgc                                                                                                                   <  1:1042768/289‑1 (MQ=255)
                                                                                                                                                        gCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACGCGGCCTTGCCGTTGAAACCGTAGTAAGAGAGCTGCCGGAACGGGAcgtggcggc                                                                                                                    >  2:939075/1‑283 (MQ=255)
                                                                                                                                                            gATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGGATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGATATAGAGCTGCCGCaaggtgcgcctgaaa                                                                                                                     <  1:2314681/283‑14 (MQ=255)
                                                                                                                                                                        cAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAAt                                                                                                   >  2:1627336/1‑289 (MQ=255)
                                                                                                                                                                              cAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgc                                                                                              <  2:2184946/288‑1 (MQ=255)
                                                                                                                                                                               aGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgcg                                                                                             <  1:302359/288‑1 (MQ=255)
                                                                                                                                                                                ggCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCgaagaa                                                                                                                                                                                                                                                  >  2:3114378/1‑138 (MQ=255)
                                                                                                                                                                                      aaTCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGACATAGAGCTGCCGGAACTGGCTGTTCTTCGCAAACACGACACCGAATTTCGCGGGGTGAat                                                                                     >  2:620780/1‑289 (MQ=255)
                                                                                                                                                                                           cTGAAAGCGGTTCTCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGCGTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATCACGCCACCGCATTTCGCGCgggttcgatcg                                                                                 >  2:1241529/1‑279 (MQ=255)
                                                                                                                                                                                           cTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCg                                                                                 >  1:639779/1‑288 (MQ=255)
                                                                                                                                                                                           cTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAAATTCGCGCGGTGAATATCg                                                                                 >  2:474199/1‑288 (MQ=255)
                                                                                                                                                                                            tGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgc                                                                                              <  1:351336/274‑1 (MQ=255)
                                                                                                                                                                                               aaGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGt                                                                            <  1:2569545/289‑1 (MQ=255)
                                                                                                                                                                                                     tGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGGGAATATCGCCCGTTTCCtt                                                                      >  2:313183/1‑289 (MQ=255)
                                                                                                                                                                                                      gcgcAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTg                                                                     >  1:2870266/1‑289 (MQ=255)
                                                                                                                                                                                                               cAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTTCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATACTGCCAGTTTCCTTGATAATgaag                                                            >  2:1923681/1‑289 (MQ=255)
                                                                                                                                                                                                               cAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGAtgtg                                                                                                                         <  1:694615/228‑1 (MQ=255)
                                                                                                                                                                                                               cAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATgaag                                                            >  1:2113894/1‑289 (MQ=255)
                                                                                                                                                                                                                    cAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCgg                                                                                          >  2:1184634/1‑254 (MQ=255)
                                                                                                                                                                                                                    cAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCgg                                                                                          <  1:1184634/254‑1 (MQ=255)
                                                                                                                                                                                                                       cGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTg                                                     >  1:2786519/1‑288 (MQ=255)
                                                                                                                                                                                                                       cGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTg                                                     >  1:1435618/1‑288 (MQ=255)
                                                                                                                                                                                                                        gTAGAACTTGCTCCCCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGc                                                   <  2:639779/289‑1 (MQ=255)
                                                                                                                                                                                                                        gTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGc                                                   <  1:1603500/289‑1 (MQ=255)
                                                                                                                                                                                                                          caaaCGTGCTCCCCACCGTGTTAGGCCCCCCGCCACGCTGCGCCCTACCTGGCTAAGTTCGCAGGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCg                                                 <  2:1964364/287‑1 (MQ=255)
                                                                                                                                                                                                                           gaaatgtatCACCAGCGGGTTAAGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGGCGCTGCCCGGGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGAACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCg                                                 <  2:3040678/280‑1 (MQ=255)
                                                                                                                                                                                                                             aCTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCt                                               <  1:1923681/288‑1 (MQ=255)
                                                                                                                                                                                                                              cTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTg                                                                                                                                                                  >  1:1536019/1‑172 (MQ=255)
                                                                                                                                                                                                                                 gCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgc                                                                                              >  1:1348721/1‑237 (MQ=255)
                                                                                                                                                                                                                                     aCCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGa                                      <  1:313183/289‑1 (MQ=255)
                                                                                                                                                                                                                                     aCCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGa                                      <  2:2870266/289‑1 (MQ=255)
                                                                                                                                                                                                                                     aCCAGCGGGGTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTCCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGa                                      <  2:1322833/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ccAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGAt                                     <  2:2736780/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  gccgcTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCt                         <  1:1106391/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccgcTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTg                        <  2:2786519/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    cgcTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTg                        <  1:1169429/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      cTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGccc                                                                              <  1:3078845/232‑1 (MQ=255)
                                                                                                                                                                                                                                                       tCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACt                                                                                                                                                                          <  1:594321/139‑1 (MQ=255)
                                                                                                                                                                                                                                                       tCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATa                                                                  <  2:223249/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                tGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGa                                                                                                                                   >  1:3178404/1‑169 (MQ=255)
                                                                                                                                                                                                                                                                tGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgc                                                                                              >  2:3090386/1‑206 (MQ=255)
                                                                                                                                                                                                                                                                tGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTcgc                                                                                              <  1:3090386/206‑1 (MQ=255)
                                                                                                                                                                                                                                                                tGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCt            >  1:1468086/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                tGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCt            >  2:2476821/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     ttaaCCTGGCTAAGTTGGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCTGCGaaa      <  2:2545161/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tctACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCgg                                                                                                                                                                                             >  1:904134/1‑106 (MQ=255)
                                                                                                                                                                                                                                                                     tctACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAACACTGGCCGCTGTTACTTTCTGCGCTTATTCCTTTCCCCCATaaccgcacca      >  2:2630398/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                     tctACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGGCAATACCTGCGaaa      <  1:2145353/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ggCTAAGTTCGCCAGAAGTCCCCGTCTTGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATa                                                                  >  1:2421613/1‑222 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                   
GGTCAAAGCGCACTGCATTTCAGTTCCGGAAGCCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTAGCCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTAGCTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCTGCGAAATGAT  >  CP042583/1925623‑1926176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A