Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,951,218 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,951,2180AT99.1% 807.5 / NA 344intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  major base T (175/163);  minor base G (1/2);  total (177/167)
Fisher's exact test for biased strand distribution p-value = 6.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,951,2190CG99.4% 804.1 / NA 344intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (173/167);  minor base T (2/0);  total (177/167)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,951,2200TA99.4% 810.4 / NA 344intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base A (174/166);  total (177/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 344 total aligned reads displayed.

CATCCGCTTTGTTGAGACTAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGACTAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGC  >  CP042583/1950938‑1951499
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
catcCGCTTTGTTGAGTGAAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGcc                                                                                                                                                                                                                                                                                   <  1:2003472/289‑1 (MQ=255)
            tgagtgaaGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGAGAAG‑AGCCAAGAAAAGCAtt                                                                                                                                                                                                                                                                       >  1:2032652/8‑289 (MQ=255)
                 gaattCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  1:134498/284‑1 (MQ=255)
                 gaaGTCCAGATACAGCGGCGAATATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  1:2908433/286‑1 (MQ=255)
                 gaaGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGTCGGTAAAACATCCAGCGTCGTGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  1:1868097/286‑1 (MQ=255)
                 gaaGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  1:1672858/286‑1 (MQ=255)
                 gaaGTCCAGATACAGCGGCGAAGATGCTGAACTGTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTGCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  1:582528/286‑1 (MQ=255)
                     tCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATc                                                                                                                                                                                                                                                              >  1:2419270/1‑289 (MQ=255)
                               gcggcgAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTTCGCCTGCTTATCATCAGACTTTTTTGCTACTTTTCCCGCCAGCGCATCAGTACGCAGCGCTTTGTCACGCTGCCGCCATAACCGTTCCGGTTCCA‑CGCCACGAAAAGCATTTTAGCCAACAAATGcccag                                                                                                                                                                                                                                                    >  2:2608879/1‑286 (MQ=255)
                               gcggcgAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATg                                                                                                                                                                                                                                                    >  2:1773341/1‑289 (MQ=255)
                                     aaGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTaaaaa                                                                                                                                                                                                                                              >  2:1083422/1‑289 (MQ=255)
                                         tgctgcACTTGACGCAGACGCAGTACCTGCGGCGGTAAAACATCCCGGGTTTGGTTTTCGGCCTTTATTCGTTGACAGATACCTTCCCCCACCAGCAGTTTCTCGCGTTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCGGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGt                                                                                                                                                                                                                                          <  2:2224353/289‑1 (MQ=255)
                                            tgcACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGc                                                                                                                                                                                                                                       <  2:272048/289‑1 (MQ=255)
                                            tgcACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTATGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGc                                                                                                                                                                                                                                       >  1:795393/1‑289 (MQ=255)
                                            tgcACTTGACGCGGACGCAGTACCTGCGGCGGTAAAACATCCGGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCGGCCATCAGCCACTCTCCTACCTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAg                                                                                                                                                                                                                                        <  2:3136832/288‑1 (MQ=255)
                                                   tACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATACCCGCTCCGGTGAAG‑ACCCAAg                                                                                                                                                                                                                                                                                >  1:896010/1‑241 (MQ=255)
                                                                    tGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCACCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGGTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCCAAGGCCATGTAAAAATGGGAGCAAATCAGATTCAGTctgccactg                                                                                                                                                                                                                >  2:1386144/1‑280 (MQ=255)
                                                                      cggcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   <  2:1463700/235‑1 (MQ=255)
                                                                      cggcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTcgacga                                                                                                                                                                                                                   >  1:1372808/1‑283 (MQ=255)
                                                                      cggcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATACAGCTTCAGTCGACTACTGGCa                                                                                                                                                                                                             >  2:2056560/1‑289 (MQ=255)
                                                                       ggcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCa                                                                                                                                                                                                             <  1:1083422/288‑1 (MQ=255)
                                                                        gcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAg                                                                                                                                                                                                            >  2:499153/1‑288 (MQ=255)
                                                                        gcggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAg                                                                                                                                                                                                            >  2:329879/1‑288 (MQ=255)
                                                                          ggTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCca                                                                                                                                                                                                         >  1:20918/1‑289 (MQ=255)
                                                                                   tCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGt                                                                                                                                                                                                                                          <  1:449896/247‑1 (MQ=255)
                                                                                        cGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCcgcg                                                                                                                                                                                           <  1:1980614/289‑1 (MQ=255)
                                                                                            tGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTg                                                                                                                                                                                        >  1:2694831/1‑288 (MQ=255)
                                                                                             gggTATCGGCCTGGAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGAc                                                                                                                                                                                      <  1:3037003/289‑1 (MQ=255)
                                                                                                  tCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCACCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAgg                                                                                                                                                                                                                                                         >  2:2876379/1‑217 (MQ=255)
                                                                                                     gCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAATATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCTGCCGCGTTGACCGGACtt                                                                                                                                                                               >  2:2933543/1‑288 (MQ=255)
                                                                                                       cTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGTTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCg                                                                                                                                                                            <  1:1152387/289‑1 (MQ=255)
                                                                                                               gTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGAc                                                                                                                                                                                      >  2:914570/1‑271 (MQ=255)
                                                                                                                  gACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTc                                                                                                                                                                 <  1:1070158/289‑1 (MQ=255)
                                                                                                                         atCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGcc                                                                                                                                                          <  1:699311/289‑1 (MQ=255)
                                                                                                                            ttCCCCCACCATCCTGTTCTCGCGCTGGTTTTTACCATCCGCCCTCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCCGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCcga                                                                                                                                                       <  2:1991513/289‑1 (MQ=255)
                                                                                                                             tCCACCCCCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGcc                                                                                                                                                          <  1:729196/285‑1 (MQ=255)
                                                                                                                             tCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   >  2:1156385/1‑180 (MQ=255)
                                                                                                                                 ccaccaGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGTACTTGCGAAATGCAGGTCAGTTGCCcgcgcgc                                                                                                                                                   >  2:1928988/1‑287 (MQ=255)
                                                                                                                                   accaGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGca                                                                                                                                                <  1:2990681/289‑1 (MQ=255)
                                                                                                                                   accaGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGca                                                                                                                                                <  1:2640688/289‑1 (MQ=255)
                                                                                                                                      aGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCg                                                                                                                                                                                                                                                                   >  1:919166/1‑171 (MQ=255)
                                                                                                                                          tGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGAc                                                                                                                                                                                 <  1:2778006/249‑1 (MQ=255)
                                                                                                                                             tctcGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAACGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGTCCGACCGAGCACCACTTTGt                                                                                                                                       >  1:2308663/1‑288 (MQ=255)
                                                                                                                                                                 tcCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAattcagatt                                                                                                                                                                                                                             <  1:3092445/182‑1 (MQ=255)
                                                                                                                                                                 tcCGCCATCAGCCACTCTCCTAACGGCTGCGCCTGCTTAGCATCATGTTTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGGGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATgg                                                                                                                  <  2:1848134/289‑1 (MQ=255)
                                                                                                                                                                               ctctCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGTAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGCAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATAGCCGCCGCTTTGACCGGACTTGCCAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTCGGCGGGCTCACCTTCAGCGATGGTTTTCGtttgcgtt                                                                                                    >  2:1185884/1‑283 (MQ=255)
                                                                                                                                                                                         tgctgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAAtt                                                                                          >  2:1223421/1‑289 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGCAG‑AGCCAAGAACAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTTGACCTCACCTTCGGCGAGTGTTTTCGTTGCCCGTTCGATTAATTGct                                                                                       >  2:2180614/1‑288 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTcg                                                                                                                                                                                                                       >  1:46832/1‑161 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACt                                                                                                                                           >  1:246578/1‑237 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACt                                                                                                                                           <  2:246578/237‑1 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACt                                                                                                                                           <  2:466095/237‑1 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCg                                                                                       >  1:1388172/1‑289 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCg                                                                                       >  1:2234891/1‑289 (MQ=255)
                                                                                                                                                                                            tgcGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCg                                                                                       >  2:1231503/1‑289 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAg                                                                                                                                                                                                                                        >  1:497685/1‑142 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGt                                                                                      >  2:62361/1‑288 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGt                                                                                      >  1:1709339/1‑288 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGt                                                                                      >  1:2073363/1‑288 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGt                                                                                      >  2:1063239/1‑288 (MQ=255)
                                                                                                                                                                                              cgcCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCCGCGAGGGTTTTCGTTGCCCGTTGGAGTAGTTGCGt                                                                                      >  2:2281391/1‑288 (MQ=255)
                                                                                                                                                                                                        tcatcaGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCg                                                                                                                      >  1:1161350/1‑246 (MQ=255)
                                                                                                                                                                                                        tcatcaGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGttt                                                                           <  2:2816748/289‑1 (MQ=255)
                                                                                                                                                                                                           tcaGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGt                                                                        <  1:1223421/289‑1 (MQ=255)
                                                                                                                                                                                                           tcaGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGt                                                                        <  2:2554138/289‑1 (MQ=255)
                                                                                                                                                                                                           tcaGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGt                                                                        <  1:2593856/289‑1 (MQ=255)
                                                                                                                                                                                                              ggATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCg                                                                     >  1:1922547/1‑289 (MQ=255)
                                                                                                                                                                                                              ggATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCg                                                                     >  2:1536824/1‑289 (MQ=255)
                                                                                                                                                                                                               gATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCCAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACC‑GACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGACCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCTTCCAGCCCGTTTTTCCCgg                                                                    >  2:3000345/1‑288 (MQ=255)
                                                                                                                                                                                                                 ttattTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGc                                                                   <  1:2277908/288‑1 (MQ=255)
                                                                                                                                                                                                                   attTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCcgcg                                                                                                                                                                                           <  1:661757/166‑1 (MQ=255)
                                                                                                                                                                                                                              ttCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGAc                                                                                                                                                                                      <  1:2211874/160‑1 (MQ=255)
                                                                                                                                                                                                                              ttCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGca                                                                                                                                                <  1:2571014/198‑1 (MQ=255)
                                                                                                                                                                                                                              ttCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTtctc                                                      >  2:47197/1‑288 (MQ=255)
                                                                                                                                                                                                                                cccGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTcgcg                                                   >  2:930091/1‑289 (MQ=255)
                                                                                                                                                                                                                                  cGCCGGAGCTTCAGAACGCAGCGGTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCTAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCgtg                                                 <  2:2084091/289‑1 (MQ=255)
                                                                                                                                                                                                                                      aGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGGTCTcgcgggtttg                                             >  2:2790625/1‑283 (MQ=255)
                                                                                                                                                                                                                                        cgcTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGtt                                           <  2:1691385/289‑1 (MQ=255)
                                                                                                                                                                                                                                        cgcTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTAAGTTGCCCGAGCGAGCACCCATTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGGTTTGTCCGGCCGGTGTTTTTTCCGGGTGgttgtt                                           >  2:72623/1‑289 (MQ=255)
                                                                                                                                                                                                                                        agcctCAGTACGCAGCGCTTGATAACGCCGCCGAAATACACGTTCCTGTGAAG‑AGCCAAGAAAAGCATTTTAGCCATCAGAGGCCATGTAAAAATGGTAGCAAGTCAGATTCAGTCGACGACTGGCGGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTggtggt                                            <  2:2308663/284‑1 (MQ=255)
                                                                                                                                                                                                                                                  cGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAAcc                                 <  1:319711/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCCCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAAc                                  >  1:1056486/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGtgttg                                                           >  1:1240485/1‑260 (MQ=255)
                                                                                                                                                                                                                                                     aGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCgtg                                                 >  2:2666383/1‑270 (MQ=255)
                                                                                                                                                                                                                                                     aGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAg                              >  2:768903/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cgcTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGAt                                                                                               <  2:2764290/222‑1 (MQ=255)
                                                                                                                                                                                                                                                       cgcTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGAt                                                                                               >  1:2764290/1‑222 (MQ=255)
                                                                                                                                                                                                                                                       cgcTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAAcc                                 >  1:2739353/1‑284 (MQ=255)
                                                                                                                                                                                                                                                       cgcCTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTTACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGCCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGACTAATTGCGGCCAGCCCGTTTTGTCCGGCCTGTGTTGTTCTTCCTGGGGGGTTAAATGTAAACCaacc                            >  2:1605259/1‑286 (MQ=255)
                                                                                                                                                                                                                                                        gcTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCcga                                                                                                                                                       >  2:803148/1‑165 (MQ=255)
                                                                                                                                                                                                                                                          tttGTCACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCaa                          <  1:96044/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               cagtccgccgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCt                     <  1:2180614/284‑1 (MQ=255)
                                                                                                                                                                                                                                                               cacaCCGCAGCCATAACCGCTCCGG‑GTAGCAGCCAAAAAAAGCGTGTGCGCCATCTACGGCCATGTAAAAAAGGTAGCAATTAAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAACTGCAGGGCAGTTGCCCTAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCt                     <  2:2358292/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               cACGCCGCCGCCATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCt                     <  1:1536824/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               aaCGCCGCCGCCATAACCGTGCCGGTGAAG‑AGCCAAGAAAAGCAGTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATGCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCt                     <  1:1465615/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gccgccgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGAt                 <  2:1317982/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgccgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGt                                                                                                                                       <  1:868536/169‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgccgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGt                                                                                                                                       >  2:868536/1‑169 (MQ=255)
                                                                                                                                                                                                                                                                      ccgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAg                                                                                                                                                                                                                                        <  1:2855017/70‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgccATAACCGTTCCGGTGAAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAat                                                                                                                                                                                                                                    <  2:667327/73‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
CATCCGCTTTGTTGAGACTAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGACTAG‑AGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGTTGCCCGAGCGAGCACCACTTTGTCGAGCTCACCTTCGGCGATGGTTTTCGTTGCCAGTTCGATTAATTGCGTCCAGCCCGTTTTGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGC  >  CP042583/1950938‑1951499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A