Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
553,620 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 553,620 | 0 | A | T | 99.2%
| 606.9
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (136/119); minor base C (1/1); total (137/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 553,621 | 0 | G | C | 99.6%
| 604.1
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (136/121); minor base T (1/0); total (137/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 553,622 | 0 | C | G | 99.6%
| 607.0
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (137/120); minor base T (0/1); total (137/121) |
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 258 total aligned reads displayed.
ATATCTGACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCAGCGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGAGTCGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAAAGCCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATAGCTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTAGCCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAGGCTTATCTTG > CP042583/553340‑553901
|||
atatCTGACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGa < 1:916615/289‑1 (MQ=255)
gACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGtc > 1:1578622/1‑287 (MQ=255)
ggCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTg > 1:1892441/1‑289 (MQ=255)
ggCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTg > 2:221923/1‑289 (MQ=255)
ggCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGAAGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACtt > 1:1090207/1‑288 (MQ=255)
tCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCaa < 1:632913/289‑1 (MQ=255)
tCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAAtcttct > 2:1912438/1‑288 (MQ=255)
tCCCCTGAAGAGGGGAGAGCATTAATTGCTGTTGGCTGGGAGAGGGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAGTCTtctc < 2:1478993/289‑1 (MQ=255)
ccccTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTTGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCa > 1:1509550/1‑289 (MQ=255)
tgggtaggggAAAGGATTAGTTGTGGGTGGGTCGGGGAGGGGGGTGATTTATACCCAATTCGTTGCCCAAACCGTTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGc < 2:1028151/281‑1 (MQ=255)
tGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGc < 1:1994587/289‑1 (MQ=255)
tGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGc < 2:1719938/289‑1 (MQ=255)
gAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCTCGCGTCTATGTACGAGCGCACCATTACTAGCACAGCTGGATGCACTATTTTTCCGCCTATCTGTTTGGACGTCTCTACTCGCAATCTTCTCGGTGCGATGacaac > 2:1736930/1‑289 (MQ=255)
aGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAacac > 2:1205179/1‑288 (MQ=255)
aGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCGATGTACGAGCTCACCATTACTACCACAGCTGGAGTCACTATTTTTCCGCCTATTCGTTAGGACGGTCCTACTGTCAATCTTCTCAGTGCGAAGaacaaact > 2:1477721/1‑282 (MQ=255)
tAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCCATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAACGCCTGGGATTATGTTCGCATGGGGTTTCTGTCACGGGTCGGTGTGCTCACCAAGTGGCTGACGGAAGAAGCGAGTTTATGGCTTCAATCGCGCGTCTATGTACGAGCTCACCATTCCTCTCACAGCTGGCTGCACTATTTTTCCGCCTATTCGTTAGGCCGTCTCTACTCGCACTCTTCTCAGTTCGAAGACAACACttcgc > 1:1065955/1‑284 (MQ=255)
tggtggCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGa < 2:613882/288‑1 (MQ=255)
tggtggCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGa < 2:785355/288‑1 (MQ=255)
ggagagaGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACg < 1:1536251/230‑1 (MQ=255)
ggagagaGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAcc < 1:449984/288‑1 (MQ=255)
gagggaggGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAcc < 2:947037/288‑1 (MQ=255)
gagagaGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAcc < 1:1205179/288‑1 (MQ=255)
agagagGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc < 2:272068/288‑1 (MQ=255)
gggggTGGAGTTAGACCCAATTCGTGGCCCAAACGGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGGATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACGAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGt < 2:234316/286‑1 (MQ=255)
agGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTAc > 1:230575/1‑289 (MQ=255)
gggTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTAc < 1:807284/288‑1 (MQ=255)
gATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGa > 1:93104/1‑267 (MQ=255)
aaTTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAacac > 2:1309585/1‑244 (MQ=255)
aaTTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACttcgct > 2:776413/1‑245 (MQ=255)
aaTTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACttcgct < 1:776413/250‑6 (MQ=255)
aaTTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGgcgc > 2:1701011/1‑261 (MQ=255)
ttCGTTGCCCAAACCGCTATGTGCTGTGGGGATGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAcc < 1:234704/264‑1 (MQ=255)
ttCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACTAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGa < 1:1328065/289‑1 (MQ=255)
gCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc < 2:1754808/259‑1 (MQ=255)
gCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc > 1:1754808/1‑259 (MQ=255)
tATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc > 2:1428126/1‑248 (MQ=255)
tgCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTg > 1:1039868/1‑288 (MQ=255)
gCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGc > 1:52957/1‑289 (MQ=255)
tgGGGAAGGGGGAATCAAGGCCTGGGCTTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGTTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTc < 1:1116147/274‑1 (MQ=255)
tgGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCg > 1:281589/1‑289 (MQ=255)
aaGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAg > 2:125575/1‑289 (MQ=255)
ggAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGcc > 1:60962/1‑249 (MQ=255)
ggAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGcc < 2:60962/249‑1 (MQ=255)
aaTCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTtctc > 1:339610/1‑188 (MQ=255)
ggATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCAc > 1:1296065/1‑288 (MQ=255)
ggATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCCAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCAc > 2:288075/1‑288 (MQ=255)
tGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGtctc > 1:1311214/1‑154 (MQ=255)
tGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGc < 1:967554/175‑1 (MQ=255)
tCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTgg < 2:1648003/289‑1 (MQ=255)
aaTGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTgg > 2:916796/1‑286 (MQ=255)
aaTGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGCTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCCCC‑GGGAGTCGTATGTTGGAAGAGCTGGCAGCGGGAAGC‑GACCGTTTCTATGCCACGCGCACCTGGCa > 2:1399929/1‑288 (MQ=255)
tttttgtaacgggtaggTGGGCTCAACAAGTGGCTGGCGGAAGAAGAGAGTTAATGGCTGCAATCGCGCTTCTATGTACGAGCTCACCATTCCTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACTTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTa < 2:52957/279‑1 (MQ=255)
acgggtcggTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAg > 1:1008472/2‑289 (MQ=255)
gtcggTGTGCTCAACAAGTGGCGGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCt < 1:1683003/288‑1 (MQ=255)
acaaGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAAc < 2:345332/289‑1 (MQ=255)
cTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAg < 1:1444908/288‑1 (MQ=255)
aCGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAAtcttct < 2:1106321/120‑1 (MQ=255)
agaagaTGGGTTATGGCTGCAATCGCGCGTTTATGTACGGGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑g < 2:1090207/288‑1 (MQ=255)
agaagaGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCGTATTCGTTAGGCCGTCGCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATGCGATTGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCGTAAGGATGTGA‑g < 1:836405/288‑1 (MQ=255)
agaagaGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑g < 2:820917/288‑1 (MQ=255)
agagagTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGa < 1:1807484/288‑1 (MQ=255)
agagTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCa > 2:145336/1‑235 (MQ=255)
tttATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCGACTCTTCCCTGGCAGCCATTAACTGTCCCGTCCGAATGCCCGGTAACGCTTAAGGATGGGA‑GCGACCTATGa > 2:66393/1‑289 (MQ=255)
ttATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGaa < 2:850143/289‑1 (MQ=255)
tgcaatcgcgcgTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGt > 1:477278/9‑289 (MQ=255)
cgcgTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTAcgcg < 2:495038/118‑1 (MQ=255)
cgcgTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCaaa > 1:729163/1‑288 (MQ=255)
cgcgTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCaaa > 1:276110/1‑288 (MQ=255)
cgcgTCAATGTACGAGCTCACCATTACTATCACAGCTGGAGGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCATCCTTTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGTAAACATGTTGGCaaa > 1:1478591/1‑288 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc < 2:356509/115‑1 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAAccc > 1:356509/1‑115 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTa > 1:1710400/1‑182 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑g > 2:15612/1‑248 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGaaa > 1:1456162/1‑288 (MQ=255)
gCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAg > 2:1124014/1‑289 (MQ=255)
cTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTCAGGATGTGA‑GCGACCTATGAACACATGTTGGCAAATCCTCGACCTTGAAAGc > 2:1532026/1‑289 (MQ=255)
cACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑g > 1:615023/1‑245 (MQ=255)
cACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCac > 2:184806/1‑289 (MQ=255)
cACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCCTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCac > 2:1575836/1‑289 (MQ=255)
tCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAg > 1:1729625/1‑289 (MQ=255)
tCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAg > 1:886724/1‑289 (MQ=255)
tCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAg > 1:755226/1‑289 (MQ=255)
acaGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTTTGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGAc > 2:772791/1‑289 (MQ=255)
acaGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGAc > 2:924376/1‑289 (MQ=255)
acaGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGAc > 2:721993/1‑289 (MQ=255)
acaGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGAc > 2:1775779/1‑289 (MQ=255)
cTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTa > 1:1629689/1‑289 (MQ=255)
cTGGATGCACTATTTTTCCGCCGATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACAtt < 1:1246801/288‑1 (MQ=255)
tGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCg > 1:1155863/1‑288 (MQ=255)
tGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGc < 1:1775779/289‑1 (MQ=255)
tGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTACGAAGACAACACTTCGCTCCGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCATATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGc < 2:253684/289‑1 (MQ=255)
ccatttttcCCGCCTATCCTTTAGGCCGTCTCTACTGGCAATCTTCTCAGTGCAAAGCCAACACTTCGCTCCGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCa < 2:204222/284‑1 (MQ=255)
aCTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGAt < 1:1929338/101‑1 (MQ=255)
cTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAgg < 1:505284/289‑1 (MQ=255)
cTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAgg < 2:477008/289‑1 (MQ=255)
ttttCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAGGCTTa > 2:1597889/1‑289 (MQ=255)
tCCGCCTATTCGTTCGGACGTCTCTACTCGCAATCTTCTCAGTGCGAAGACAACACTTCGCTCTGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAGGCTTATCt < 1:1587087/289‑1 (MQ=255)
ccGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAATTCCG‑TAGCCCCGGGGAGTCTTAGGTCCGAGAAGCTGG‑AGCCGGGAGCGGATCGTTTCTATCCACCGCTTCCC‑GGCCGCCCATAACCGTCCCATCCGGAAGGCCGGGCACCCCTAAGGATGTTACGCGACCATGGAAAACAGTTTGCCAAACCCTGGAATTTGAAA‑CACGGCCCCAAATGAACATTATCCGCAAGCCtaa > 2:1333690/1‑283 (MQ=255)
ccGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAGGCTTATCtt > 2:1815554/1‑289 (MQ=255)
cGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑AACGCAAATAGAAATTATCCTCCAGGCTTATCtt > 2:1950541/1‑288 (MQ=255)
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ATATCTGACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCAGCGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGAGTCGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAAAGCCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATAGCTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTAGCCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCC‑GGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGC‑GATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGA‑GCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCAC‑GACGCAAATAGACATTATCCGCCAGGCTTATCTTG > CP042583/553340‑553901
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
