Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 555,409 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583555,4090AT98.8% 387.5 / NA 167intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (81/84);  minor base G (0/2);  total (81/86)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583555,4100CG98.8% 382.5 / NA 167intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (81/84);  minor base T (0/2);  total (81/86)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583555,4110TA98.2% 387.8 / NA 167intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (80/84);  minor base C (1/2);  total (81/86)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 167 total aligned reads displayed.

AAGATGTCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTACTCTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGATATCATAACTAAAGCGAAT  >  CP042583/555132‑555690
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                         
aaGATGTCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAAcgc                                                                                                                                                                                                                                                                                  <  2:1566722/289‑1 (MQ=255)
      tCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATc                                                                                                                                                                                                                                                                            >  1:1458476/1‑289 (MQ=255)
      tCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGAGGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGAATCTCAATGGCTAAATAATCGCTCGCCCGACGCCGAACTTCATCCACGCCGGCCATATCGTTTGACTGCAACGCCGCATc                                                                                                                                                                                                                                                                            >  1:547612/1‑289 (MQ=255)
                      tGAAAATAATGAAGGAAAAAATGATGAGGGTGAAAAACCAAAGAGCATTACCAGAATCATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCAcc                                                                                                                                                                                                                                                            <  1:869899/289‑1 (MQ=255)
                                      aaaaaTGCTGAGGGAGAAAAACAAAAGAGAATTACCAGCATTATCAAAATCAGTTTACCGGTGCTGGGGATAGGTTATGCTCTCGGCAAAATCGGGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTtctc                                                                                                                                                                                                                                            <  2:1515052/289‑1 (MQ=255)
                                      aaaaaTGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTtctc                                                                                                                                                                                                                                            <  1:293155/289‑1 (MQ=255)
                                            gatgtGTGTGAGAAACCACAGGTCGTTACCAGCATTAGCAAGATCAGTTTAAGGGTGCTGGTGTTAGTTGTGGCTCTCGGCAAAGTCGCGATTTTGTGTAGCTGGCGATGTGTTGTTTGCGTCGAAGCCGGATGTAGCGTTTACGCCGCATCCGCCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCAGCCACGCGGGCCATATCGTTTGACTGCAACTCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTctcg‑ctcg                                                                                                                                                                                                                                      <  2:662423/288‑1 (MQ=255)
                                                        aaaCCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAgcgccc                                                                                                                                                                                                                         <  1:237960/289‑1 (MQ=255)
                                                        aaaCCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAgcgccc                                                                                                                                                                                                                         <  1:158413/289‑1 (MQ=255)
                                                            cacaGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCCTCACCCAccgcccgcc                                                                                                                                                                                                                      >  2:148246/1‑287 (MQ=255)
                                                            cacaGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATAACGTTTGACTTCAACGCCGCATCAAAATCGGTGATCCCCCGGCCGACCCCTTCCCG‑CCCGTCACCCCgcccccccg                                                                                                                                                                                                                      >  2:1913809/1‑288 (MQ=255)
                                                                gagCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAACATCGGTGATCCCCCGGCCGATCTCTTCTCG‑CCCGTCACCCAGCGCCCGGCCCca                                                                                                                                                                                                                  >  2:483919/1‑288 (MQ=255)
                                                                  tcATTACCAGCATTATCAAAATCAGTTTAGCGGTGTGGGTGATAGGTTATGATAGCGGCAAAATCGCGATGTTGTTTAGCTGCCGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCTATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCcac                                                                                                                                                                                                                 <  2:1835762/286‑1 (MQ=255)
                                                                      tACCAGCATTATCAAAATCAGTTGAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATACCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAActct                                                                                                                                                                                                           >  1:1170290/1‑289 (MQ=255)
                                                                              ttATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGttt                                                                                                                                                                                                   <  1:142986/289‑1 (MQ=255)
                                                                                aTCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCCAAATCGGTGATCCCCCGGCCGATCTCCTCCCG‑CTCGTCACCCACCGCCCGCGACCCCACCCCTTCCAg                                                                                                                                                                                                      >  2:1433762/1‑284 (MQ=255)
                                                                                aTCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACACCTCCTCCAGTTTg                                                                                                                                                                                                  >  1:222649/1‑288 (MQ=255)
                                                                                aTCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCCCG‑CTCGTCACCCAGCGCCCGCCCCCACCACTCTTCCAGTTTg                                                                                                                                                                                                  >  2:704513/1‑288 (MQ=255)
                                                                                aTCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCCCG‑CTCGTCACCCAGCGCCCGCCCCCACAACCCTTCCAGTTTg                                                                                                                                                                                                  >  2:1605246/1‑288 (MQ=255)
                                                                                 tCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTg                                                                                                                                                                                                  >  1:1137007/1‑287 (MQ=255)
                                                                                 tCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCCCTCCAAAATGGGTAACAACCCGGCC‑ATCCCTTCTCG‑CCCGTCACCCAGCGCCCGCCCCCACAACTCTTCCAGGTTGGCt                                                                                                                                                                                               >  1:440573/1‑289 (MQ=255)
                                                                                           tttAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTTTTTATGAGATCTCCATGGCTAAATAATCGCTCGCCCGCCGCCGCACTTCCTCCACGCGGGCCATATCGTTTGACTGCAAAGCCGCCTCAAAATCGGTCATCACCTGGCCGACCGCTTCCCG‑CTCGTCACCCAGCCCCCGCCCACACCACCCTCCCAGTTCTGCCTTA‑CAGGt                                                                                                                                                                                      >  2:1315436/1‑288 (MQ=255)
                                                                                           tttAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCtt                                                                                                                                                                                                          >  1:469587/1‑269 (MQ=255)
                                                                                           tttAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGt                                                                                                                                                                                      >  1:1605297/1‑288 (MQ=255)
                                                                                            ttAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAgg                                                                                                                                                                                       <  1:1605246/286‑1 (MQ=255)
                                                                                              acgggTGTTGGTGATAGGTTTTTCTCTCGGCAAACTCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGGGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGa                                                                                                                                                                                  <  2:1126882/286‑1 (MQ=255)
                                                                                              aaCGGTGCGGGGGATAGGTTATGCTCTCGGCAAAAGCGGGATGTGGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGa                                                                                                                                                                                  <  2:1148547/289‑1 (MQ=255)
                                                                                                cGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGAtt                                                                                                                                                                                <  1:1549501/289‑1 (MQ=255)
                                                                                                cGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGGTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGAtt                                                                                                                                                                                <  1:777821/289‑1 (MQ=255)
                                                                                                  gTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATtg                                                                                                                                                                               <  1:682570/288‑1 (MQ=255)
                                                                                                             aGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   >  2:1748342/1‑195 (MQ=255)
                                                                                                             aGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   <  1:1748342/195‑1 (MQ=255)
                                                                                                             aGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTGCATCCACGCGGGCCATATCGTTTGACTGCCACGCCGCCTCAAAATCGGTGATCACCCGGCCGATCCCTTCTCGCCTCGCCCCCCA‑CGCACGCGTCCCCCACCCTCCCCGTCTGGCTTTACAAGGT‑CCATTGCAGAGCAAATc                                                                                                                                                                    >  2:745893/1‑288 (MQ=255)
                                                                                                                  aTGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCGTCCGGCAGCCGTGTTCATGGGCTCTCAATGGCTAAATAATCGCCCGCCCGCCGCCGAACATCCTCCACGCGGGCCATATCGTTTGACCGCAACGCCGCATCAAAAACGATGATCACCGCGCCGAGCACGTCCCA‑CTCGTCACCCAGCGACCGCCCGCCCAACCCTTCACATTTCGCTCTA‑AAGGTGCGAGTGCTGAGCATATCGCGCgg                                                                                                                                                              >  2:23991/1‑289 (MQ=255)
                                                                                                                  aTGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   >  1:1011625/1‑190 (MQ=255)
                                                                                                                  aTGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   <  2:1011625/190‑1 (MQ=255)
                                                                                                                  aTGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCgg                                                                                                                                                              >  1:1552173/1‑289 (MQ=255)
                                                                                                                  aTGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGACGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGGTCTCAATGGCTAAATAATCGCTCGCCGGCCGCCGAACTTCATCCACGCGGGCCATATAGTTTGACTGCGACGCCGCAACAAACCCGGTGACCACACGCGCGATCCCTTCCCG‑CTCCACAACCGTCCCCCGCGCCCACATCGCGTCCAGTTCGCTACCA‑ACTGTCCGATTGATGAGCATAgcgcgctg                                                                                                                                                              >  2:859258/1‑287 (MQ=255)
                                                                                                                   tGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGt                                                                                                                                                                                                     >  1:657335/1‑250 (MQ=255)
                                                                                                                         cGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACCCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGCGCCTCTCGCGCGGATAAAtt                                                                                                                                                       >  2:499916/1‑289 (MQ=255)
                                                                                                                          ggCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAgcgcccg                                                                                                                                                                                                                        <  2:831903/224‑1 (MQ=255)
                                                                                                                            cAAAAACGCGTTGTTGTTTAGCTGACAATTTGTTTTGTGGGCGCATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAAtttt                                                                                                                                                     <  2:1963076/288‑1 (MQ=255)
                                                                                                                             aaaaTCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCa                                                                                                                                                   <  1:704513/289‑1 (MQ=255)
                                                                                                                               aaTCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAAt                                                                                                                                                 >  1:1384207/1‑289 (MQ=255)
                                                                                                                                    cgATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGa                                                                                                                                            >  1:1829254/1‑289 (MQ=255)
                                                                                                                                                   gACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGAc                                                                                                                              >  1:964201/1‑288 (MQ=255)
                                                                                                                                                                      cGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AATGTGCGATTGATGAGCATACCGCGCGGATAAATTTTCAATTCGGATAAcc                                                                                                                                       >  1:365273/1‑260 (MQ=255)
                                                                                                                                                                        aTGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   <  1:909238/136‑1 (MQ=255)
                                                                                                                                                                        aTGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGt                                                                                                                                                                                                                                                                   >  2:909238/1‑136 (MQ=255)
                                                                                                                                                                                tGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCCCTTCAATCTGCTGCGCGCTCAATGTTa                                                                                                >  2:1538515/1‑289 (MQ=255)
                                                                                                                                                                                 gCAGCGTTTCCGCCCCATCCGGCAGCCCTGTTTATGGGATCCCAATGGCTAAATAATCGCTCCCCCGCCGCCAAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTAc                                                                                               <  1:151961/289‑1 (MQ=255)
                                                                                                                                                                                 gCAGCGTTAACGCCGCACCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCCCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTAc                                                                                               <  1:1469095/289‑1 (MQ=255)
                                                                                                                                                                                  cAGCTTTTACGCCGCATCGCGCAGCCTTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTAc                                                                                               <  2:964201/288‑1 (MQ=255)
                                                                                                                                                                                   aGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCCCCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCCTATCGCGCGGATAAATTTTCAATGCGGGTAACCGCTGCCGACTCTCTTCAATCTGCTGCGCGCTCATTGttcctg                                                                                             >  2:1465128/1‑285 (MQ=255)
                                                                                                                                                                                   aGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCg                                                                                             >  1:612019/1‑289 (MQ=255)
                                                                                                                                                                                   aGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATAAAGCGCGGATAAATTTTCAATGCGGATAACCCCGTCCGACTCTCTTCACTCTGCTGCGCGCCAAATGTTa                                                                                                >  2:1336233/1‑286 (MQ=255)
                                                                                                                                                                                     cGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGa                                                                                                                                            <  1:1364839/240‑1 (MQ=255)
                                                                                                                                                                                     cGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGa                                                                                                                                            >  2:1364839/1‑240 (MQ=255)
                                                                                                                                                                                      gTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCggg                                                                                           <  2:520859/288‑1 (MQ=255)
                                                                                                                                                                                             ccgcATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGc                                                                                                                                                                                    >  1:258597/1‑192 (MQ=255)
                                                                                                                                                                                             ccgcATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGc                                                                                                                                                                                    <  2:258597/192‑1 (MQ=255)
                                                                                                                                                                                               gcttCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCAGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTaa                                                                                 <  1:745893/286‑1 (MQ=255)
                                                                                                                                                                                               gcATCCGGCAGCCGTGTTTCTGGAATGTCAAGGGCTAAATAATCGCTCGCCAGCCGCCGAACTTCAGCCCCGCGGGCCATATCGTTTGCCTGCAACGCCGCATCAAAATCGGTGATCGCCCGGCCTATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTGACCGGGCTGTGGTTaa                                                                                 <  2:222649/289‑1 (MQ=255)
                                                                                                                                                                                               gcATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGt                                                                                                                                                                                                     >  1:1646718/1‑174 (MQ=255)
                                                                                                                                                                                               gactCCGGCGGCCGTGTTAACGGGCACTCGATGGCTAAATAATCGCTCGCCCCCCGCCGACCTTCAGCCTCGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTaa                                                                                 <  2:1479393/286‑1 (MQ=255)
                                                                                                                                                                                                 gtCCGGCAGCCGTTGTTGTGGGATCTAAACGGCTAAATAATCCCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAAAGCCGAATCAAAATCGGTGCTCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAAt                                                                                <  2:1182165/287‑1 (MQ=255)
                                                                                                                                                                                                 aTCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAAt                                                                                >  2:707390/1‑288 (MQ=255)
                                                                                                                                                                                                    cGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCAct                                                                            <  2:1829254/289‑1 (MQ=255)
                                                                                                                                                                                                             tgtTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCTCCCGCGCCCACCACTCTTCCAGTTTGGCTTTA‑CAGGTGCGATTGATGAGCATATCGCGTGGATAAATTTTCCATGCGGATAACCGCGTCCGACTCTCTTACATCGGCTGCGCGACCAATGTTACCGGGCTGTTGTCAATCACTCTGGACttc                                                                   >  2:1939141/1‑288 (MQ=255)
                                                                                                                                                                                                                    gggATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCggg                                                                                           <  2:883041/258‑1 (MQ=255)
                                                                                                                                                                                                                       tcatcAATGGTTACATAACCGCTGCCCGGCCGCCGAACTTAATCCACCCGGGCCATATCGTTGTACTCCAACGCCGCATCAAAATCGGTGATCACCCGGCCGTTCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCg                                                          <  2:1552462/285‑1 (MQ=255)
                                                                                                                                                                                                                       aTCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAgcgccc                                                                                                                                                                                                                         <  2:951924/130‑1 (MQ=255)
                                                                                                                                                                                                                       aTCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAgcgccc                                                                                                                                                                                                                         >  1:951924/1‑130 (MQ=255)
                                                                                                                                                                                                                       aTCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCggg                                                                                           <  1:1947340/255‑1 (MQ=255)
                                                                                                                                                                                                                       aTCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAAt                                                                                <  2:304941/266‑1 (MQ=255)
                                                                                                                                                                                                                       aTCTCAAGGGCTAAGTACTCGCCCGCCCGCCGCCGAACTTCATCCACCCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACGCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCg                                                          <  2:612019/288‑1 (MQ=255)
                                                                                                                                                                                                                         ctcAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCt                                                       >  2:1112051/1‑289 (MQ=255)
                                                                                                                                                                                                                         ctcAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCt                                                       >  2:321871/1‑289 (MQ=255)
                                                                                                                                                                                                                         ctcAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCt                                                       >  1:87499/1‑289 (MQ=255)
                                                                                                                                                                                                                           cAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTc                                                     <  1:148246/289‑1 (MQ=255)
                                                                                                                                                                                                                            aaTGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCtg                                                                                        <  1:1797985/253‑1 (MQ=255)
                                                                                                                                                                                                                                 cTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑ACGGTGCGATTGATGAGCATATCGCGCGGATACATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGGTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGaa                                                >  2:144983/1‑288 (MQ=255)
                                                                                                                                                                                                                                 cTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCACTGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGac                                                >  2:543396/1‑287 (MQ=255)
                                                                                                                                                                                                                                 cTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCCTCGGGCTTACGGTTACCGGGGTGTTGTTAATCACTCTGGGTTTCAAGCCTCCGCCTTCCAGTAg                                               >  2:1167086/1‑289 (MQ=255)
                                                                                                                                                                                                                                    aataatCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTAGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCAc                                            >  1:648439/1‑289 (MQ=255)
                                                                                                                                                                                                                                         tcgctcgcCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTc                                                                                                                                                                                                         >  1:1166049/1‑128 (MQ=255)
                                                                                                                                                                                                                                           gctcgcCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTaa                                                                                 >  2:74975/1‑245 (MQ=255)
                                                                                                                                                                                                                                              cgcccgccGCCGAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCa                                  >  2:1935794/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    ccgccgAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTAGCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAAc                            <  2:617873/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    ccgccgAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAAc                            <  1:1980069/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    cacccgAACTTCATCCACGCGGCCAATGTCGTTGGACTGCAACGCCGCATCAAAATCGATGATCAACCGGCCGATCTCTTCCCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTTATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAAc                            <  1:1920070/286‑1 (MQ=255)
                                                                                                                                                                                                                                                       ccgAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTaa                                                                                 <  1:777966/233‑1 (MQ=255)
                                                                                                                                                                                                                                                       ccgAACTTCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACCTCACCTTCactcccc                            <  1:1029788/286‑7 (MQ=255)
                                                                                                                                                                                                                                                              tCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGatat                  <  1:284237/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGatat                  <  1:707390/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCATCCACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGatat                  <  1:829279/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              ccagccACGCGGGCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGGGATCCCCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGatat                  <  2:1605297/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGATATCATAACTAAAg       <  1:489108/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gCCATATCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGCCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGATATCATAACTAAAg       <  1:527315/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tatCGTTTGACTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCAAGTCCACTTCAAGCAACCCGTTTATATCATAAATAAAACGAat  >  2:1167426/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                         
AAGATGTCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGACGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGTTTATGGGATCTCAATGGCTAAATAATCGCTCGCCCGCCGCCGAACTTCATCCACGCGGGCCATATCGTTACTCTGCAACGCCGCATCAAAATCGGTGATCACCCGGCCGATCTCTTCTCG‑CTCGTCACCCAGCGCCCGCGCCCACAACTCTTCCAGTTTGGCTTTA‑AAGGTGCGATTGATGAGCATATCGCGCGGATAAATTTTCAATGCGGATAACCGCGTCCGACTCTCTTCAATCTGCTGCGCGCTCAATGTTACCGGGCTGTGGTTAATCACTCTGGACTTAACGCTGCCGTCTTCCAGAAGCACGTCAACTTCAAGCAACCCGTTGATATCATAACTAAAGCGAAT  >  CP042583/555132‑555690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A