Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
567,689 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 567,689 | 0 | A | T | 99.1%
| 486.9
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base T (95/116); total (100/116) |
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
| * | CP042583 | 567,690 | 0 | G | C | 99.1%
| 487.2
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (98/115); total (100/116) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 567,691 | 0 | C | G | 99.1%
| 504.7
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base G (98/116); total (100/116) |
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 221 total aligned reads displayed.
GCCAGGAATGCAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑AGCGCGATCAGCGCGG‑CTAGCGTAAGTTTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCAGCCTGATTGCGCTGCATCGCCATGATGATCTTC > CP042583/567411‑567968
|||
gCCAGGAATGCAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGgatc‑tcggcgatca > 2:265849/1‑288 (MQ=255)
cAGGAATGCAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGgatc‑tcggcgatcagcg < 2:1141788/289‑1 (MQ=255)
aaTGCAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGgatc‑tcggcgatcagcgc < 1:1187730/286‑1 (MQ=255)
cAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑Cttcg > 1:1330184/1‑286 (MQ=255)
cgcATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑Cttcgg > 1:758656/1‑281 (MQ=255)
aTAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑Cttcggtatcat < 1:775667/288‑11 (MQ=255)
aaTGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTaaa > 1:1502097/1‑289 (MQ=255)
ttGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTa < 1:881887/289‑1 (MQ=255)
ttGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTa < 1:359572/289‑1 (MQ=255)
tgctgcCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑Ctt < 1:383503/265‑2 (MQ=255)
tgctgcCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑CCGGCGCTCAGCCCGG‑CTTCGGTATCCTCGCTTAAAGGGTGA‑g > 2:805040/1‑289 (MQ=255)
tgctcgcGTTGTTACCAGTATGTGGCGTATAACACCTTACGGGTAAAAATCCTGGAAACTTAAAGCATATTGCTAACATGATGATAGACATTGCCAAATCAACCAACGGAAATTGCCATGGTCGGCGGAGGATTGGTGGGCGGCGCACTGGCGATGGGGCTGGCACAGAACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGAGAGCCAACCGGACGTGCGGATC‑TCGGCTATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑g < 2:1679026/283‑1 (MQ=255)
ctgcCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑ggg > 1:1357358/1‑289 (MQ=255)
gcCGTTTTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGACGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGt < 2:224769/289‑1 (MQ=255)
gtgACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGa < 1:81901/289‑1 (MQ=255)
gtgACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGa < 1:1070795/289‑1 (MQ=255)
gACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATg < 1:1647868/289‑1 (MQ=255)
ccAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGc < 1:1079499/288‑1 (MQ=255)
ccAGTATGAGCGTGATCAGCCCTTAGGGGTAAAAATCCTGTAAACGTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGc < 1:200178/288‑1 (MQ=255)
ttATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGAAAAATCAAACAACGGAAATGGCCATGGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGAACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATg < 2:1897471/289‑1 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGGTAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCTG‑CTTCGGTATCATTGCTTCAAGGGTTG‑GGGGGCTGGGTTGCAGTACAGGCTATGCg > 2:1540929/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTCTGCg > 2:1511498/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCg > 1:534425/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCg > 1:1942027/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCg > 1:1136998/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCg > 1:349055/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCg > 1:1232600/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATGGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTATAGGCTATggg > 2:732551/1‑287 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTAGCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACGGGCTATGCg > 1:915406/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTGGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTACCATTGCCTAAAGGGTTA‑GGGGTCTGGGATGCAGTCCCGGCTATGCg > 2:1910098/1‑289 (MQ=255)
aTCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGAACGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATG‑TCGGCGAACAGCGCGG‑CGTCGGGACGATTGCTTACAGGGATA‑GGTGTCTGGGAAGCAGTCATGGCTAGGCg > 2:514344/1‑289 (MQ=255)
gCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGa < 2:1345145/267‑1 (MQ=255)
ccTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGcc < 1:1910098/288‑1 (MQ=255)
cTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGACTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCAt < 2:939890/289‑1 (MQ=255)
cTTAGGGGTAAAAATACTGTAAACTTAAAGCAGAGTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCAt < 2:435126/289‑1 (MQ=255)
tAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTCTCATTGCTTAAAGGGTTA‑GGGGCCTGGGAATCAGTACAGGCTATGCGTTGCCAt > 2:1299186/1‑287 (MQ=255)
tAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATg < 2:1996949/278‑1 (MQ=255)
tAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTAcc > 1:1308201/1‑288 (MQ=255)
tAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGGTGGGGAGCCAGTACAGGCTATGCGTTGCCATCCTTAcc > 2:1459068/1‑288 (MQ=255)
tGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑c > 1:1599924/1‑211 (MQ=255)
ttAGAGCATAGTGCTAAAAGGATGATGTACACTGACAAAGGAACCATCGGAAATTGCGATGATGGGCTGAGGGAGGGTCGGCGGCGCACGGGGGCTGGGGCTGGCACGGAACGGATTTGGGGTAACGGTGATCGAGGACGCAGAACCAGCGCCGTTTGTGGCTGATGGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑gtgg < 2:703665/289‑1 (MQ=255)
atTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTAGGGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑gtgggagtggga > 1:404892/1‑289 (MQ=255)
ttGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTAGCATTGCTTAAAGGGTTA‑GGGGGCTGGGATGCAGTACCGGCTATGCGTTGCCATCCTTACCGCAGACTGGGAACGgtgggggtggaac > 2:1599406/1‑286 (MQ=255)
tGCTAAAAGGATGATGGACCATGACAAAACAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGGCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAAc < 2:1942027/289‑1 (MQ=255)
tAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGAGCTAGC‑CGAACAGCGCGT‑CTTCGGCATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGGGTTGCCCTCCTTACCGCAGACTGGAACC‑gtgggaggtggacccgga > 2:107479/1‑278 (MQ=255)
aCAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGGGTTGCCATCCTTACCGCCGACTTGAAAC‑GGGGGAGGTGGAAAcgccgc > 2:213934/1‑289 (MQ=255)
aCAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACTGCAGACTGGAAAC‑GTGGGAGTGGGAAACGgcgc > 1:1442847/1‑289 (MQ=255)
aCAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTCCTTAAAGGGTTA‑GGGGTCTGGGATGCATTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GCGGGAGTGGGAAACGgcg > 2:1985455/1‑288 (MQ=255)
ggATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGGTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCAtg > 1:1035017/1‑289 (MQ=255)
gatgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGGGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATg < 2:1025869/222‑1 (MQ=255)
gatgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGGGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATg > 1:1025869/1‑222 (MQ=255)
atgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGGTAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCAtg < 1:1540929/287‑1 (MQ=255)
atgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTa < 1:493195/208‑1 (MQ=255)
atgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CCTCGGTATCATTGCTTAAAGGGTTa > 2:493195/1‑208 (MQ=255)
tgatTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCAtgtg < 1:900485/288‑1 (MQ=255)
aCCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTTCCATCCTTACCGCCGACTGGAAAC‑GGGGGCTCGGGAAAAGGCCCATGTGGTGTTTg > 2:1581595/1‑289 (MQ=255)
cATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAc > 1:995900/1‑289 (MQ=255)
aTGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCTATCGTTACCGCAGCGTGGAAAC‑GTGGGATGTGGAAAGGGCGCACGTGTTGTTTCAc > 2:900485/1‑288 (MQ=255)
tGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATg > 1:1500061/1‑224 (MQ=255)
tGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAcg > 2:1361421/1‑288 (MQ=255)
ccAAATCAACCAACGTAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTAGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAcgccg < 1:312006/288‑1 (MQ=255)
caaccaacGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGTGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGCACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGGACTCG‑GTAGCATTTCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTCCAGGCTATGCGTTGCCCTCCTTACCGCAGAACGTAAAC‑GGGGGAGTGGGGAAACGCTCATGTGGTTTTTTTCGCCGCTGa > 2:1084775/1‑287 (MQ=255)
acGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGc > 2:593355/1‑289 (MQ=255)
cGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCt > 1:1702267/1‑289 (MQ=255)
aaaTTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTAc < 1:582181/288‑1 (MQ=255)
aaaTTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTAc < 1:1380525/288‑1 (MQ=255)
aTTGCCATTGTAGGGGGAGGAAGGGTGGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGGACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCgc < 2:349055/289‑1 (MQ=255)
tggcgttGTGGGGGGAGGAAGGGTGGGGGGCGCACTGGCGCTGGGGATGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCgctg < 2:386905/284‑1 (MQ=255)
ggCCATTGTCGGCAGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGGACGGATTGGCGGTAACGGTGATCGAGCACGCAGAACCAGCGACGGTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCgctg < 1:945954/288‑1 (MQ=255)
cATTGTCGGGGGGGGAAGGGTCGGGGGCGAACGGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCgctgct < 2:1929028/288‑1 (MQ=255)
ggggaggcAGGGGCGGCGGGGGCCTGGGGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGGGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCtata < 2:1035017/286‑1 (MQ=255)
gcggGGGAATGGTCGGCGGCGCACGGGCGCTGGGGCGGGCAAAGCACGGATGTTCGGTAACGGTGGTCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGAGGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCtata < 2:960005/288‑1 (MQ=255)
ggaggaATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTCTAtgg > 1:1789733/1‑289 (MQ=255)
ggaggaATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATAtg < 1:1117187/288‑1 (MQ=255)
ggaggaATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATAtg < 1:787435/288‑1 (MQ=255)
gaATGGTCGTCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCCCAGACTgg < 1:953772/210‑1 (MQ=255)
gTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAcgccg > 2:754381/1‑247 (MQ=255)
tCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAaca < 1:1164669/288‑1 (MQ=255)
tCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAaca < 2:949014/288‑1 (MQ=255)
ggcgCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTc < 1:265849/288‑1 (MQ=255)
gtgcTGGGGCGGGCACAGCACGGATGTGCGGTAACGGTGATCGAGCACGCAGAACCAGGGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGAGATCAGAGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGGTGCCATCCTTGCCGAAGACTGGAACC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAg < 2:1442847/286‑1 (MQ=255)
gggCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTtgt > 1:1865512/1‑289 (MQ=255)
aGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCt > 1:440935/1‑218 (MQ=255)
aGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAacac > 2:341060/1‑259 (MQ=255)
cACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGAGTTGTGGCAGGCGCTgg > 1:218304/1‑289 (MQ=255)
aTTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTg > 1:228924/1‑259 (MQ=255)
cGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATCGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATAGGGTGGACAACACTGTCCTGCAACAGGCGTTGTTGCAGGCGGTGGAAGCGCATc > 2:1159238/1‑288 (MQ=255)
tAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAg > 2:1769247/1‑212 (MQ=255)
aCGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGt > 1:197550/1‑110 (MQ=255)
gATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACg < 1:1158469/289‑1 (MQ=255)
aGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAcg > 1:1478842/1‑186 (MQ=255)
aGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGAcg < 2:1478842/186‑1 (MQ=255)
cACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGGGCATCCGAAAGTAACGTTCCggg > 2:622111/1‑287 (MQ=255)
aCGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCCAGATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCAACCGAAAGGAACATTACgtgg > 2:853895/1‑288 (MQ=255)
cGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAaca > 2:1178031/1‑227 (MQ=255)
gcCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGctcgc < 1:1511498/287‑5 (MQ=255)
gTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGACACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCGGGAAGCGCATGCGAAAGTAACGTTACGTTTGCCAGGCCGCGTGGtt > 2:768140/1‑289 (MQ=255)
tGATAGCCAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCTCGCTGATTGCGCTGCa < 1:732551/288‑1 (MQ=255)
cAACCGGACGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCa < 1:853895/287‑1 (MQ=255)
cGTGCGGATC‑TCGGCGATCAGCGCGG‑CTTCGGTATCATTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCTCGCTGATTGCGCTGCa > 1:1633819/1‑273 (MQ=255)
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GCCAGGAATGCAGGGCGCATAGTGTAATGCTTTGCTGCCGTTGTGACCAGTATGAGCGTTATCAGCCCTTAGGGGTAAAAATCCTGTAAACTTAAAGCATATTGCTAACAGGATGATTGACCATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATC‑AGCGCGATCAGCGCGG‑CTAGCGTAAGTTTGCTTAAAGGGTTA‑GGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAAC‑GTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCAGCCTGATTGCGCTGCATCGCCATGATGATCTTC > CP042583/567411‑567968
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
