Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,446 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,4460GC99.6% 584.7 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (112/137);  total (112/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,4470CG99.6% 580.4 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (112/137);  total (112/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583604,4480TA99.2% 584.5 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (110/137);  minor base C (2/0);  total (112/138)
Fisher's exact test for biased strand distribution p-value = 2.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 250 total aligned reads displayed.

ATTTCAATGCGCGTAATTTGGCTCA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGC‑TCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGC  >  CP042583/604171‑604722
                                                                                                                                                                                                                                                                                    ||||                                                                                                                                                                                                                                                                                  
aTTTCAATGCGCGTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATc                                                                                                                                                                                                                                                                          <  1:1240544/288‑1 (MQ=255)
   tCAATGCGCGTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCgg                                                                                                                                                                                                                                                                      >  1:87253/1‑289 (MQ=255)
         cgcgTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGa                                                                                                                                                                                                                                                                 <  2:518775/288‑1 (MQ=255)
         cgcgTAATTT‑GCGCAGTGGCAACCGGGACGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCgg                                                                                                                                                                                                                                                                  <  2:1499150/287‑1 (MQ=255)
          gcgTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGaa                                                                                                                                                                                                                                                                <  1:669174/288‑1 (MQ=255)
          gcgTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGaa                                                                                                                                                                                                                                                                <  1:804477/288‑1 (MQ=255)
          gcgTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGaa                                                                                                                                                                                                                                                                <  1:1915573/288‑1 (MQ=255)
            gTAATTTGCGACA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACgg                                                                                                                                                                                                                                                             <  1:1593704/289‑1 (MQ=255)
              aatttgcgacA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGta                                                                                                                                                                                                                                                           <  1:723573/280‑1 (MQ=255)
                               aCCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATcgc                                                                                                                                                                                                                                           <  2:1843677/289‑1 (MQ=255)
                                      cGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCCCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCCTTAATCG‑ACTGGAACATCGCGGGCGGAACGGTATCACCAAACATAACACGGGTaaa                                                                                                                                                                                                                                    >  2:319000/1‑288 (MQ=255)
                                               gTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTc                                                                                                                                                                                                                           >  2:930745/1‑289 (MQ=255)
                                                ttCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCg                                                                                                                                                                                                                          >  1:1740915/1‑289 (MQ=255)
                                                 tgcccAAAACCCGTCACCGGCAGGCCTAAAACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGCATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGTAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGt                                                                                                                                                                                                                            <  2:689040/282‑1 (MQ=255)
                                                 tCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGa                                                                                                                                                                                                                         >  1:161199/1‑289 (MQ=255)
                                                   cGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGata                                                                                                                                                                                                                       >  2:1229472/1‑289 (MQ=255)
                                                    gCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGatat                                                                                                                                                                                                                      <  1:930745/289‑1 (MQ=255)
                                                              tCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAAt                                                                                                                                                                                                            <  1:60169/289‑1 (MQ=255)
                                                                      aGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAAtcgagcta                                                                                                                                                                                                     >  1:1739787/1‑281 (MQ=255)
                                                                            aaTACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGc                                                                                                                                                                                                 >  2:28214/1‑286 (MQ=255)
                                                                             aTACCATCAGTGGCAGAGAAGAGTAACCATAAATTGGGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCCGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCtg                                                                                                                                                                                             <  2:1319376/289‑1 (MQ=255)
                                                                                  aTCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCtgttgtt                                                                                                                                                                                        >  1:1017035/1‑288 (MQ=255)
                                                                                  aTCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCtgttgt                                                                                                                                                                                         >  1:1407769/1‑288 (MQ=255)
                                                                                   tCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCg                                                                                                                                                                                                  >  1:40797/1‑278 (MQ=255)
                                                                                   tCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGcc                                                                                                                                                                                                >  1:778537/1‑280 (MQ=255)
                                                                                   tCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGcc                                                                                                                                                                                                <  2:778537/280‑1 (MQ=255)
                                                                                   tCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCCCCCTGTtttg                                                                                                                                                                                        >  2:1713536/1‑288 (MQ=255)
                                                                                       tGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGaa                                                                                                                                                                                                                                                                >  1:149652/1‑212 (MQ=255)
                                                                                       tGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAg                                                                                                                                                                                   >  1:1454143/1‑289 (MQ=255)
                                                                                           agagAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGcc                                                                                                                                                                                <  2:451533/288‑1 (MQ=255)
                                                                                           agagAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGcc                                                                                                                                                                                <  2:1407769/288‑1 (MQ=255)
                                                                                                      aCCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCgg                                                                                                                                                                                                                             >  1:1299524/1‑232 (MQ=255)
                                                                                                       ccATACCTCGAGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGACTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAAACAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATAc                                                                                                                                                                   <  2:173351/289‑1 (MQ=255)
                                                                                                       ccATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGCACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCACTGTTGTGCGAAGGCCCAGAACAACATa                                                                                                                                                                    >  1:349834/1‑288 (MQ=255)
                                                                                                          tACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGcc                                                                                                                                                                                                <  1:1676695/257‑1 (MQ=255)
                                                                                                               tGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGc                                                                                                                                                                                 <  2:66514/267‑1 (MQ=255)
                                                                                                                gCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTTCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGGATAACCAAACATATCGCGGTTAACGAAGCGGCCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGGGCGAAGGCCCATAACAACAGACTGAAGAAgg                                                                                                                                                          >  2:1272799/1‑289 (MQ=255)
                                                                                                                 cGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGcc                                                                                                                                                                                >  2:1740444/1‑266 (MQ=255)
                                                                                                                    aCCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGa                                                                                                                                                       >  1:285928/1‑288 (MQ=255)
                                                                                                                       aGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATAATGAAGCAGGagagag                                                                                                                                                    >  2:30157/1‑286 (MQ=255)
                                                                                                                         cGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTc                                                                                                                                                                                                                           >  1:829696/1‑215 (MQ=255)
                                                                                                                                          aaTGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCgg                                                                                                                                                                                                                                                                  <  1:1317574/159‑1 (MQ=255)
                                                                                                                                              cAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGaa                                                                                                                                                                                                                                 <  1:1192150/188‑1 (MQ=255)
                                                                                                                                                     cGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGcc                                                                                                                                                                                                <  2:147171/214‑1 (MQ=255)
                                                                                                                                                      ggCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGaa                                                                                                                                                                                                                                 >  1:1211431/1‑180 (MQ=255)
                                                                                                                                                      ggCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAAAGAAGCGGTCGATATAAAGGCTAACAGAGGTACCGCCCTGTTGTGCGAAGGCCGAGAACAACATACTGAAGAAGGGTGGCGGTAACATCACCACCAGCTCCTTCCGcgttt                                                                                                                      >  2:1678108/1‑283 (MQ=255)
                                                                                                                                                        cgcTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTg                                                                                                                  >  1:1336209/1‑289 (MQ=255)
                                                                                                                                                             atcaGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCTCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAAACAGCCCAAGCTCCTTCCGCTGTTTCTgttctt                                                                                                             >  2:899085/1‑284 (MQ=255)
                                                                                                                                                                       ggccaagAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCg                                                                                                   >  1:678946/1‑289 (MQ=255)
                                                                                                                                                                       ggccaagAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCg                                                                                                   >  2:397064/1‑289 (MQ=255)
                                                                                                                                                                       ggccaagAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCg                                                                                                   >  1:339329/1‑289 (MQ=255)
                                                                                                                                                                            agagCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATaaa                                                                                              >  1:1001485/1‑289 (MQ=255)
                                                                                                                                                                                 aaaTTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAAtttt                                                                                          <  2:1342590/288‑1 (MQ=255)
                                                                                                                                                                                  aaTTTCCCCCCGAGGCGAACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGGACAGCGTAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTg                                                                                        <  2:1603235/289‑1 (MQ=255)
                                                                                                                                                                                  aaTTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGaaca                                                                                                                                                                         <  2:1707311/208‑1 (MQ=255)
                                                                                                                                                                                      tCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAg                                                                                    <  1:962358/289‑1 (MQ=255)
                                                                                                                                                                                               tGCACACGGTACGATTAACAGCGACACTGTCTGTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAAAGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGTGAACGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACAcc                                                                              <  2:1548048/286‑1 (MQ=255)
                                                                                                                                                                                                  gaaCGGTACGATTACCCGCGACAATCTCTTTTACCACCAACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGc                                                                         <  2:1882379/286‑1 (MQ=255)
                                                                                                                                                                                                        tACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGa                                                                                                                                                       >  1:1679704/1‑204 (MQ=255)
                                                                                                                                                                                                                cccGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAgg                                                                                                                                                                                  >  2:1041124/1‑169 (MQ=255)
                                                                                                                                                                                                                cccGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAAttttt                                                                                         >  2:259987/1‑258 (MQ=255)
                                                                                                                                                                                                                cccGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAAttttt                                                                                         <  1:259987/258‑1 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGACGGTGAGCGTCACAACACGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATACATTTTTGCCCGTAAACCCAGTCCACTAATATTTGCAACa                                                        >  2:1433715/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACa                                                        >  1:1994594/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACa                                                        >  1:1159453/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACa                                                        >  1:1818984/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACa                                                        >  1:565516/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACa                                                        >  2:1725717/1‑289 (MQ=255)
                                                                                                                                                                                                                     tacacTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAGCATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  1:1949077/288‑1 (MQ=255)
                                                                                                                                                                                                                     gaaaccccctTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  2:604695/281‑1 (MQ=255)
                                                                                                                                                                                                                     gACACTCTCTTTTACCACCCACGCCAGGAACCCACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  1:125185/289‑1 (MQ=255)
                                                                                                                                                                                                                     gACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATAGTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  1:1355354/289‑1 (MQ=255)
                                                                                                                                                                                                                     gACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  1:1725717/289‑1 (MQ=255)
                                                                                                                                                                                                                     gACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  2:1159453/289‑1 (MQ=255)
                                                                                                                                                                                                                     gACACTCTCATTTACGACCCACGCCAGGAACACACCGCAAAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCAGTCGGAACAGTATAACCAAACGTATCGCGGTTAACGAAGCGTTCGATATAAACGATAATCGAGCTACCGCTCTGTTTTGCGACGGCCCAGAACAACATACTGAATAAGGTGAGCGTCACAATCATCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAAGAGTCGCGACAAtt                                                     <  2:1204722/289‑1 (MQ=255)
                                                                                                                                                                                                                      acacTCTCTTTGACCACCCACGCAAGAAACACACCGCACAGCATAACTGCGAAGGCAGTAATCG‑GCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGGTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTAACGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  2:1628686/288‑1 (MQ=255)
                                                                                                                                                                                                                                   ccacccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccga                                       <  1:397064/289‑4 (MQ=255)
                                                                                                                                                                                                                                   ccacccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccga                                       <  1:1625493/289‑4 (MQ=255)
                                                                                                                                                                                                                                    cacccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccga                                       >  1:1497678/1‑285 (MQ=255)
                                                                                                                                                                                                                                      cccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGcc                                                                                                                                                                                                >  2:428969/1‑133 (MQ=255)
                                                                                                                                                                                                                                      cccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAgg                                                                          <  2:1746097/251‑1 (MQ=255)
                                                                                                                                                                                                                                      cccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     <  2:558055/272‑1 (MQ=255)
                                                                                                                                                                                                                                      cccacGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccgacc                                     >  1:536451/1‑283 (MQ=255)
                                                                                                                                                                                                                                        accGCCAGGAACACCCCGCACAGCATAACAGCGAAGGCATTAATCG‑ACTGGAAAATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccgaccact                                  <  2:359017/287‑9 (MQ=255)
                                                                                                                                                                                                                                           gCCAGGAACAAACCGCGAAGCATAGCTGCGAAGGCATT‑ATGCGACTGGAACATCGCGGTCGGAACGGGATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCtt                               <  2:1818984/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTc                             <  2:1009342/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  acacacCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                        <  1:750627/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  acacacCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                        <  2:76092/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  acacacCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                        <  1:492093/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  acacacCGAACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCACACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                        <  2:848743/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    accccGCACAGAATAACTGCGAAGGCAATAATCG‑ACTGGAACATCGCGGTCAGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGGTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGACCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                      <  2:1497295/286‑1 (MQ=255)
                                                                                                                                                                                                                                                     cacCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTc                                                                                                                                                  >  2:960865/1‑164 (MQ=255)
                                                                                                                                                                                                                                                     cacCGCACAGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAccgacca                                    <  1:302439/274‑7 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACAccc                                                                             <  1:1713721/228‑1 (MQ=255)
                                                                                                                                                                                                                                                              gCATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAAtt                                                     >  2:1919062/1‑248 (MQ=255)
                                                                                                                                                                                                                                                               cATAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATc           >  2:780992/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aTAACTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt            <  1:1876904/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aaCTGCGAAGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAg                                                                           <  2:1302790/222‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gAAGGCATTAATCG‑ACTGGAACATCGCGGTAGGAACGGTATAACCAAACATATCGCTGTTAAAGAAGCGGTCGATATAAAGTCTAATCGAGCTACCGCCCTGTTGTGCGAATGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAACTTTTTGCCTGTAAACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGTTAATCAGTGCAgcc  <  1:1571016/289‑3 (MQ=255)
                                                                                                                                                                                                                                                                         aaGGCATTAATCG‑ACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGaagaag                                                                                                                                                           <  1:1064330/135‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ||||                                                                                                                                                                                                                                                                                  
ATTTCAATGCGCGTAATTTGGCTCA‑TGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGC‑TCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGC  >  CP042583/604171‑604722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A