Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 613,270 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583613,2700GC100.0% 553.4 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (111/123);  total (111/123)
*CP042583613,2710CG100.0% 551.7 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (111/123);  total (111/123)
*CP042583613,2720TA99.6% 551.0 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (110/123);  minor base C (1/0);  total (111/123)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 234 total aligned reads displayed.

AATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTT  >  CP042583/612991‑613550
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCGCTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  1:1508591/288‑1 (MQ=255)
aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  1:245622/288‑1 (MQ=255)
aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  1:828114/288‑1 (MQ=255)
aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  1:276849/288‑1 (MQ=255)
aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  1:1800431/288‑1 (MQ=255)
       gCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   >  1:1869479/1‑281 (MQ=255)
       gCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  2:1869479/281‑1 (MQ=255)
         cACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGt                                                                                                                                                                                                                                                                          >  1:1463322/1‑288 (MQ=255)
                         aCCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                                                                                                                                              >  2:548363/1‑268 (MQ=255)
                          ccATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTg                                                                                                                                                                                                                                                        <  1:528090/289‑1 (MQ=255)
                           caacAGGTGGGGTTCATGGGTGGGGCTGCGGCGAGGAAATGCTGCACCATATGGGGTTGCGGTGAAAGACCCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                                                                                                                                       <  2:1049906/286‑1 (MQ=255)
                           cATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                                                                                                                                       <  2:676758/289‑1 (MQ=255)
                           cATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                                                                                                                                       <  2:233879/289‑1 (MQ=255)
                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGCCGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGACCTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACCTGCCCCAGCTATTCCGTTCATCCAGCGTACCGTTCCACGACATGCGGTGGCTGCTGCTGTGGCTACTGtgttt                                                                                                                                                                                                                                                        >  2:306229/1‑284 (MQ=255)
                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATg                                                                                                                                                                                                                                                    >  2:287454/1‑289 (MQ=255)
                                   gTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTTGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATAACCCACTCACCCGCTGAACTCAGTTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCCGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCGATTACGTTCATCCAGCGTATCGTTCCACGACATGCCGTGTATGGTGCTGTTGCTACTGTTTTGCATCTCATa                                                                                                                                                                                                                                               >  2:1291759/1‑289 (MQ=255)
                                     ggTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAg                                                                                                                                                                                                                                              >  2:723176/1‑288 (MQ=255)
                                      gTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                                                                                                                                            >  1:735017/1‑289 (MQ=255)
                                        tCATTGGTGGAGCTGCGGCTATGAAATTCTGCACCATATTGGGTGGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCaa                                                                                                                                                                                                                                          <  2:126392/289‑1 (MQ=255)
                                               tggAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGac                                                                                                                                                                                                                                    <  1:62253/288‑1 (MQ=255)
                                                 gAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                                                                                                                                            >  2:1162528/1‑278 (MQ=255)
                                                 gAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                                                                                                                                            <  1:1162528/278‑1 (MQ=255)
                                                      gcggcgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAAATGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACACACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCCTGCTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTAACGTTACACGACATGCGGTGTATGGATCCGTGGCTACTGGTGGTTCTGTAATAGCCAACCAGaccacccgt                                                                                                                                                                                                                             >  2:37445/1‑285 (MQ=255)
                                                            aTGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAg                                                                                                                                                                                                                      >  1:1406483/1‑289 (MQ=255)
                                                                       cACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaa                                                                                                                                                                                                            >  2:1524828/1‑283 (MQ=255)
                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGAGCGGATTGCAGTCCGGCAGACATGCCACAGCTATTACGTTCATCCAGCGTATCGTTCCACGACCTGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACACGATCACCGTTACCGAAGGGGAgcgacatccaca                                                                                                                                                                                                      >  1:1134198/1‑278 (MQ=255)
                                                                              ttGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgaca                                                                                                                                                                                                      >  2:334887/1‑276 (MQ=255)
                                                                              ttGGGGTGCGATCAAAGAACCGCTCCAGCTGCTGCAGACGGAACTGTCATCACTGGCAGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgacaga                                                                                                                                                                                                    <  2:45511/289‑14 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTa                                                                                                                                                                                                                                                                >  2:897999/1‑221 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTg                                                                                                                                                                                                                                                             >  1:159224/1‑224 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGa                                                                                                                                                                                                                  >  1:301773/1‑267 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGGAATGGACAGGTAAATCTg                                                                                                                                                                                            >  1:98604/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                                                                                                                                            >  1:877856/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                                                                                                                                            >  1:722658/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                                                                                                                                            >  2:390090/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGAAAGATAAATCTg                                                                                                                                                                                            >  1:1420841/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACCGTTTGGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                                                                                                                                            >  1:1984450/1‑289 (MQ=255)
                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGCGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCCATTACGTTCACCCAGCGTATCGTTCCACGAACTGCCGTGTATGGTGCAGTGGCTACTTGTTGGCATGTCATAGCCAACCCGACCACCGTTCACGAAGCGGATGCAAATCGACAGTTAAATTTg                                                                                                                                                                                            >  2:79306/1‑289 (MQ=255)
                                                                                           aaaGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATg                                                                                                                                                                                                                                                                            >  2:518606/1‑204 (MQ=255)
                                                                                             aGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTcg                                                                                                                                                                                     <  1:390090/289‑1 (MQ=255)
                                                                                             aGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTcg                                                                                                                                                                                     <  1:287454/289‑1 (MQ=255)
                                                                                             aGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTcg                                                                                                                                                                                     <  1:1524828/289‑1 (MQ=255)
                                                                                                     tCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                                                                                                                                              <  1:1906667/288‑1 (MQ=255)
                                                                                                     tCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                                                                                                                                              <  2:602775/288‑1 (MQ=255)
                                                                                                     tCCAGCTGCTGCTGACGAACCTGTAATCACTGGCGGCATAGGTACCAGAATTATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCAGCTGGGCTCCAGTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTGCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCttt                                                                                                                                                                             <  2:572912/289‑1 (MQ=255)
                                                                                                           tgctgctgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCt                                                                                                                                                                         <  1:1579017/287‑1 (MQ=255)
                                                                                                                 tgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt                                                                                                                                                                  <  1:1748425/288‑1 (MQ=255)
                                                                                                                 tgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt                                                                                                                                                                  <  2:1004427/288‑1 (MQ=255)
                                                                                                                 ggtcGGAACGTTAATCACTGGCGGCATAGGTCACAAGAAGATCCCACTCACCCGCTGCAAGCATGTGCTTAGATGTAACGCTCACCTGGCCTCCATTGTCCGGACGATCGAATTGCAGTCCTGGAGACATGCCCCAGCGATTACATTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt                                                                                                                                                                  <  2:1083359/285‑1 (MQ=255)
                                                                                                                   aaggAACGGTAATCACTGGCGGGATAGGTGCCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTGACCTGGGCTCCTTTGTCCGGGCGAACGGATTGCAGTCCGGCAGACGTGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                                                                                                                                               <  2:1398903/287‑1 (MQ=255)
                                                                                                                    cGGAACTGTAATCACTGGCGGCATAGGTACCAGAATTATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                                                                                                                                               <  1:1918411/288‑1 (MQ=255)
                                                                                                                    cGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                                                                                                                                               <  1:1665932/288‑1 (MQ=255)
                                                                                                                      gAACTGTAATCACGGGCGACATAGGTACCAGAAATATACCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTc                                                                                                                                                             <  2:1612210/288‑1 (MQ=255)
                                                                                                                      aaaCTGTAATAACTGGCGGCAGAGGTACCAGAAAGATCCCACGCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATGGGCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGGGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTc                                                                                                                                                             <  1:306229/287‑1 (MQ=255)
                                                                                                                                 aCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                                                                                                                                   <  2:1492524/159‑1 (MQ=255)
                                                                                                                                 aCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGTTCTTTATCTTCGTAGGGGGTCGTCTTGaatgac                                                                                                                                                 >  2:1338790/1‑285 (MQ=255)
                                                                                                                                 aCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgac                                                                                                                                                 >  1:1683493/1‑285 (MQ=255)
                                                                                                                                   tGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                                                                                                                                              <  2:145156/258‑1 (MQ=255)
                                                                                                                                    ggcggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCt                                                                                                                                                                                                                                                                       >  2:203529/1‑168 (MQ=255)
                                                                                                                                    ggcggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                                                                                                                                              <  1:1146841/257‑1 (MQ=255)
                                                                                                                                    ggcggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                                                                                                                                              >  2:1146841/1‑257 (MQ=255)
                                                                                                                                      cggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGa                                                                                                                                                                                                                  >  2:106596/1‑219 (MQ=255)
                                                                                                                                      cggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtcga                                                                                                                                            >  1:1004679/1‑280 (MQ=255)
                                                                                                                                          aTAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtcgaaat                                                                                                                                         <  1:165496/288‑13 (MQ=255)
                                                                                                                                                        tatCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCa                                                                                                                          <  1:519347/289‑1 (MQ=255)
                                                                                                                                                          tCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGt                                                                                                                        <  1:1045077/289‑1 (MQ=255)
                                                                                                                                                                  acccgctgaactCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGATATATCTCTTCAGTCACCAata                                                                                                                >  2:1204150/10‑289 (MQ=255)
                                                                                                                                                                  acccgctgaactCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAata                                                                                                                >  1:201757/10‑289 (MQ=255)
                                                                                                                                                                             tCAGGTGCTGATAGTTACCGCGCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGGCACCAATA‑TCAACATTaaa                                                                                                    <  1:925462/289‑1 (MQ=255)
                                                                                                                                                                                  tGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAAcc                                                                                                 <  1:499717/287‑1 (MQ=255)
                                                                                                                                                                                    cTGCTAGGTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTACAGTCCGTCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACAGGCGGTGTATGGTTCTGTGGCTACTGTTTTGCATTTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACctgct                                                                                             <  2:1418513/289‑1 (MQ=255)
                                                                                                                                                                                        tAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCtgtg                                                                                          <  1:660086/288‑1 (MQ=255)
                                                                                                                                                                                           ttACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCAGCAGACATGCCCCAGCTATTACGCTCATCCCGCGTATCGTTCCACGACATGCGGTGTATGGTCCTGTGGCACCTGGTTTGCACGTCCTATCCAACCCGCTCGACGCTACCCAAGGGTAGTGAAATCGACTGCCAATTCTGCTTGCCGCGCTCTTTACGCTCCTAGTGGGCCGTATTCAATGCCGGCGAAATCCACATAGCACGACAGTCACCAATC‑TCAACATGACAACCTTCtctgcttg                                                                                      >  2:1553166/1‑285 (MQ=255)
                                                                                                                                                                                             aCCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTg                                                                                    >  1:1210828/1‑289 (MQ=255)
                                                                                                                                                                                              ccGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTgg                                                                                   <  1:885523/289‑1 (MQ=255)
                                                                                                                                                                                                 cTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                                                                                                                                              <  2:433705/100‑1 (MQ=255)
                                                                                                                                                                                                 cTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                                                                                                                                              >  1:433705/1‑100 (MQ=255)
                                                                                                                                                                                                 cTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCgg                                                                                >  2:351762/1‑289 (MQ=255)
                                                                                                                                                                                                           cTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAgg                                                                       <  1:232767/288‑1 (MQ=255)
                                                                                                                                                                                                           cTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGAAATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTGCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAgg                                                                       <  1:1065965/288‑1 (MQ=255)
                                                                                                                                                                                                             ccATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGt                                                                    <  1:1291759/289‑1 (MQ=255)
                                                                                                                                                                                                              cATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTACGGTGCTGTGGCTACCGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCTACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTCTTGAATGACGTCGAAATAGAGAAATCTCTCCAGTCA‑CAATATTCAACATTAACACCTGCTTCGATGTTGCAGGTctgtgcggcc                                                                     >  2:1839056/1‑278 (MQ=255)
                                                                                                                                                                                                                   tCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCa                                                                                                            >  2:1766935/1‑243 (MQ=255)
                                                                                                                                                                                                                   tCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCAt                                                              >  1:1494724/1‑289 (MQ=255)
                                                                                                                                                                                                                        aCGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGTGGTCGTGGAGGTGTCTGCATTcca                                                          >  1:1071584/1‑288 (MQ=255)
                                                                                                                                                                                                                         cGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTccac                                                         <  1:1338790/288‑1 (MQ=255)
                                                                                                                                                                                                                             cGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGt                                                    >  1:1952013/1‑289 (MQ=255)
                                                                                                                                                                                                                                 ttGCGGTCCGGCAGACATGCCCACGCTCTTTCGTTCGTCCAGCGTATCGTTCCGCGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGCCCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGa                                                <  2:1683493/289‑1 (MQ=255)
                                                                                                                                                                                                                                      gTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                                                                                                                                               <  2:1406420/174‑1 (MQ=255)
                                                                                                                                                                                                                                      gTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAg                                           <  2:1952013/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAg                                        >  1:1254544/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAg                                        >  2:262171/1‑289 (MQ=255)
                                                                                                                                                                                                                                             aGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGtt                                     <  1:1768729/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTGCCCCAGCTATTACAGTCATCCAGCGTATCGTGCCACGACATGCGGTGTATGGTGCTGTGGCTAGTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGt                                <  2:1752550/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  tGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTa                               <  1:1019220/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGt                    >  1:567972/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  ttCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAAc                                                                                                  >  1:1398979/1‑206 (MQ=255)
                                                                                                                                                                                                                                                                     aTCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTTCACCAGGTTTTATGTAGCAGGTGGGCGTAAAGGTTGGGGTTTAGTggg            >  2:158984/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATc      >  1:357505/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              aTCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGt   <  2:882681/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
AATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCACCAATA‑TCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTT  >  CP042583/612991‑613550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A