Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 692,675 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583692,6750GC99.6% 553.6 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (113/122);  minor base A (0/1);  total (113/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,6760CG99.6% 547.4 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (112/123);  total (113/123)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,6770TA98.7% 538.1 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (2/0);  major base A (108/123);  minor base C (3/0);  total (113/123)
Fisher's exact test for biased strand distribution p-value = 1.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 236 total aligned reads displayed.

ATTTTCCAGGTCATTTGCGCTAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGGCTTTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATTACAAACTCCTTTGGCTTAATCCTTGCAAAATCAGGTCGATATGACAGGTCACCGTCTGGTTGATCAGTTCGGTCTTTT  >  CP042583/692396‑692945
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                            
aTTTTCCAGGTCATTTGCCGAAATGGTGCGGCTTTTCACCAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAAcg                                                                                                                                                                                                                                                                       <  2:1106775/289‑1 (MQ=255)
                   gaaaTAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGaaa                                                                                                                                                                                                                                                     >  1:854573/3‑288 (MQ=255)
                          tGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCCTACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGAGCCCCCCAACACGGAAACTAAGAtt                                                                                                                                                                                                                                             >  1:283100/1‑289 (MQ=255)
                          tGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACAAAGAtt                                                                                                                                                                                                                                             >  1:259105/1‑289 (MQ=255)
                           gCGTCTTTTCCAACGCCCTTGCTGTGGGTTATAGAAGTTCTGCGCATGGTCATAGGCCGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGAtt                                                                                                                                                                                                                                             <  2:829801/288‑1 (MQ=255)
                                 tttCCACGACCCTTGCTGGCGGTTATATAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTa                                                                                                                                                                                                                                      <  2:649155/289‑1 (MQ=255)
                                 tttCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTa                                                                                                                                                                                                                                      <  1:327444/289‑1 (MQ=255)
                                         aCCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCCCCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGCTAGCATCACCTTCGTCCACCGCCAGCGACTCAACGCGCCCCCCAACACGCAAACTAAGATTTCCCGTACGAttat                                                                                                                                                                                                                               >  2:1706468/1‑288 (MQ=255)
                                           ccTTGCTGGCGGTTATAGTAGTTCTGCGCATAGTCATGGGCGGCTTGGGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGTTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:722825/289‑1 (MQ=255)
                                           ccTTGCTGGCGGTTATAGAAGTTGTGGGCATGGTCATGGGCGTCTTGCCCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAATCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  2:369926/289‑1 (MQ=255)
                                           ccTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:1470337/289‑1 (MQ=255)
                                           ccTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:1200945/289‑1 (MQ=255)
                                           ccTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:1715440/289‑1 (MQ=255)
                                             ttGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACg                                                                                                                                                                                                                          >  1:1809878/1‑289 (MQ=255)
                                             ttGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACg                                                                                                                                                                                                                          <  1:1706468/289‑1 (MQ=255)
                                                    cGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCAt                                                                                                                                                                                                                   >  1:1297369/1‑289 (MQ=255)
                                                      gTTATGTAAGTTTCGCGCAACGTCATGGGCTGCTTGCGCCTGTTTGACCGCTGAGGCGTACTGAGCGAGTTCTTCAGTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATTAGGGCAATCTCATAGGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATa                                                                                                                                                                                                                  <  2:1601098/288‑1 (MQ=255)
                                                      gTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATa                                                                                                                                                                                                                  <  2:751616/288‑1 (MQ=255)
                                                              aGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCa                                                                                                                                                                                                          <  1:411474/288‑1 (MQ=255)
                                                                 tCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGc                                                                                                                                                                                                       >  2:198426/1‑288 (MQ=255)
                                                                  cTGCGCATAGTCGTAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCg                                                                                                                                                                                                     <  2:1667694/289‑1 (MQ=255)
                                                                  cTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCg                                                                                                                                                                                                     >  2:542127/1‑289 (MQ=255)
                                                                          aGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGAAATATCATACGGCTTGTGATCCCGTTCGCCCAGCACCTGGCCCGCTTTGAAAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATTCAGCGTCAGTCCGTTATCCTg                                                                                                                                                                                             >  1:1814324/1‑289 (MQ=255)
                                                                            tCATAGGCGGTTTGCGCCTGGTTCCCCCGTGCGGCGGCCGGGTGGATTTTTTCATTGCGACACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTggc                                                                                                                                                                                           <  2:1239430/289‑1 (MQ=255)
                                                                              aTAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTggcgg                                                                                                                                                                                         <  1:990368/289‑1 (MQ=255)
                                                                                acgctgctcacgcCTGTTTCACCGCTCCGGCGGCCTGAGCGATTTCTTCACTGCGATACCCGGCAATCATCAGATCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATCCGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTCATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATGTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCt                                                                                                                                                                                       <  1:1409956/279‑1 (MQ=255)
                                                                                     gcTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCCACACGGACACTAAGATTTACCGTACGAATAACCACTGTGCCCTACAGCCTCAGGCCGCTACACTggcggtcttagt                                                                                                                                                                                  >  2:1422773/1‑282 (MQ=255)
                                                                                      cTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGAt                                                                                                                                                                                  >  1:1548011/1‑288 (MQ=255)
                                                                                      attggaccTTTTTCACCGCTGCGGCGGCCTGAGCGATTGCTTCATTGCGTAACCCGGCAAGCATCCGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGAt                                                                                                                                                                                  <  2:426136/282‑1 (MQ=255)
                                                                                            ccTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCCCGTTGCCAAACCGCGTCAGTCCGTTATCCTGGCGGCTTTGACAccacca                                                                                                                                                                           >  2:922108/1‑289 (MQ=255)
                                                                                                tttCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:1528648/236‑1 (MQ=255)
                                                                                                tttCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCa                                                                                                                                                                                                          >  2:1814241/1‑254 (MQ=255)
                                                                                                 ttCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGc                                                                                                                                                                      <  1:1083343/289‑1 (MQ=255)
                                                                                                     ccGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCTTTATCCTGGCGGCTTTGATACCACCAGTAGCCTcc                                                                                                                                                                  >  1:1735121/1‑289 (MQ=255)
                                                                                                         tGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCa                                                                                                                                                              >  1:1185657/1‑289 (MQ=255)
                                                                                                          gcggcgGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTCCCATACAGCCTCAGGCCGTTATCCTGGCGGCTTTGATTACACCAGTACACCCCGGCaa                                                                                                                                                             >  2:1474418/1‑289 (MQ=255)
                                                                                                           cggcggCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACg                                                                                                                                                                                                                          >  2:202642/1‑227 (MQ=255)
                                                                                                                gcCTGATAGATTTCTTCATTGCGCACCCCGGCAAGCATCAGGTCATCCTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCAcg                                                                                                                                                        <  2:1352407/288‑1 (MQ=255)
                                                                                                                     aGCGCTTTCGTCATGGCGCTACCCGGCGAGCATCGGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTGCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTGCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACggcggc                                                                                                                                                   <  2:1764826/288‑1 (MQ=255)
                                                                                                                        gATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGt                                                                                                                                               <  1:1495191/289‑1 (MQ=255)
                                                                                                                             cttcATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCAc                                                                                                                                          <  1:542505/289‑1 (MQ=255)
                                                                                                                             cgtcATTGCGGTAACCGGGAAGAGTCAGGTCAGACTGAGCCTGGGCCACCGAA‑ACACCCGACTTCGCCTGAATCCGGGCAATCTCCTACGGTTTGTGCTCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTAAGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCAc                                                                                                                                          <  2:771548/287‑1 (MQ=255)
                                                                                                                              tacATTGCGATACCAGACAAGCATCCGGTCAACATGCGCCTGTGCCAC‑CTACACACCCGCGTTCGCCGGCATAAGGCCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACt                                                                                                                                         <  2:259105/287‑1 (MQ=255)
                                                                                                                                    gCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACg                                                                                                                                                                                                                          <  1:1941460/202‑1 (MQ=255)
                                                                                                                                    gCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACg                                                                                                                                                                                                                          >  2:1941460/1‑202 (MQ=255)
                                                                                                                                       aTACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGCTTTTCCGTACGAATATCCACGTTGCCATACCGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTCCCCCTccccccca                                                                                                                                 >  2:1445722/1‑286 (MQ=255)
                                                                                                                                               cAAGCATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCAc                                                                                                                        >  1:586472/1‑289 (MQ=255)
                                                                                                                                                   cATCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGa                                                                                                                      <  2:586472/287‑1 (MQ=255)
                                                                                                                                                    aTCAGGTCATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGa                                                                                                                      <  2:1273686/286‑1 (MQ=255)
                                                                                                                                                    aTCAGGTCATACAGCCGCTCGGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAg                                                                                                                   <  2:336164/289‑1 (MQ=255)
                                                                                                                                                         gccATACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCa                                                                                                                                                                                                                            <  1:495100/177‑1 (MQ=255)
                                                                                                                                                            aTACTGCGCCTATGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTAGCCACGCACCTGGACCGCTTTGATCGCATCACCTTCGCCCACCGCCAGCGTTTCAACGCGCCCCCCAACCCGGGAACTCAGATTTACCGGACGAATAACCACGTTTCCCTACACGGTCAAGCCGCTATGCTGGCGGCTGTGATACCAGCAGACGCCTCCGGCCACCACGGCGGCACGTCCCACGACAGACCATTCGATCACgttctgctttt                                                                                                             >  2:684518/1‑277 (MQ=255)
                                                                                                                                                             tACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTAc                                                                                                                                                                                                                                     <  2:1064460/166‑1 (MQ=255)
                                                                                                                                                             tACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTAc                                                                                                                                                                                                                                     >  1:1064460/1‑166 (MQ=255)
                                                                                                                                                             tACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATacc                                                                                                                                                                               >  1:199837/1‑220 (MQ=255)
                                                                                                                                                             tACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACggcggc                                                                                                                                                   >  1:556063/1‑248 (MQ=255)
                                                                                                                                                             tACTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCAACAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACggcggc                                                                                                                                                   <  2:556063/248‑1 (MQ=255)
                                                                                                                                                              aCTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACCGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCCCCCAGAGCCCCCGGCAACCCAGGCGCCCAGTACCCCTACCCCCAATCCGACACCGACCGGcttttgta                                                                                                          >  2:1866397/1‑285 (MQ=255)
                                                                                                                                                              aCTGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAAAACGGAAACAAAGATTTACCGTACGAAAATCCACGTTCCCTTACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCTTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGACCACGACAGGTTTTTcca                                                                                                          >  1:349648/1‑288 (MQ=255)
                                                                                                                                                                tGCGCCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTtcatca                                                                                                       <  1:922108/289‑1 (MQ=255)
                                                                                                                                                                  cgcCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACt                                                                                                     >  1:1906685/1‑289 (MQ=255)
                                                                                                                                                                   gcCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGCATCAACGCCCCCCCCAACACGGAAACCAAGATTTACCGTACGAATAACCACGTTGCCATa                                                                                                                                                                                                                  >  2:495100/1‑179 (MQ=255)
                                                                                                                                                                   gcCTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACt                                                                                                     <  2:1548011/288‑1 (MQ=255)
                                                                                                                                                                     cTGTGCCACCGAA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACa                                                                                                  <  1:1445722/289‑1 (MQ=255)
                                                                                                                                                                           caccgaa‑aCACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTc                                                                                             <  1:1613862/282‑1 (MQ=255)
                                                                                                                                                                             ccgaa‑aCACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCtt                                                                                          <  2:1185657/285‑1 (MQ=255)
                                                                                                                                                                                        cGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTa                                                                                                                                                                                                                                      <  2:902855/139‑1 (MQ=255)
                                                                                                                                                                                        cGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTa                                                                                                                                                                                                                                      >  1:902855/1‑139 (MQ=255)
                                                                                                                                                                                                        aGGGCAATCTCATACTGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcag                                                                   <  1:1225694‑M1/286‑15 (MQ=255)
                                                                                                                                                                                                           gCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtc                                                                <  1:819052‑M1/286‑18 (MQ=255)
                                                                                                                                                                                                              aTCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatg                                                          <  1:1260110‑M1/289‑24 (MQ=255)
                                                                                                                                                                                                               tctcATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCa                                                                                                                                                  <  1:26272/200‑1 (MQ=255)
                                                                                                                                                                                                               tctcATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCa                                                                                                                                                  >  2:26272/1‑200 (MQ=255)
                                                                                                                                                                                                                ctcATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgac                                                        <  1:513143‑M1/289‑26 (MQ=255)
                                                                                                                                                                                                                  cATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacag                                                      >  1:1775676‑M1/1‑262 (MQ=255)
                                                                                                                                                                                                                    tccggCCTGTGCTCCAGTTCGCCCAGCACCTGGCCCGCTTTGATCGCATCACCTTCGTCCACCGCCAGCGATTCAACCCGCCCCCCAACACGGAAACTAAGATTTACCGTACGACTATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggt                                                    <  1:771364‑M1/287‑30 (MQ=255)
                                                                                                                                                                                                                         cTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCAcg                                                                                                                                                        >  1:981216/1‑184 (MQ=255)
                                                                                                                                                                                                                         cTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccg                                               >  1:1024342‑M1/1‑255 (MQ=255)
                                                                                                                                                                                                                         cTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcacc                                                >  2:962036‑M1/1‑255 (MQ=255)
                                                                                                                                                                                                                          ttGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTGCACCGCAAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCTCGTTGCCATCCAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATACGATCACGAAAGGATGTTTCATCACAACAAAATCCTTTGCGATAATccttgcaaaatcaggacgatatgaaaggtc                                                   >  2:987939‑M1/1‑254 (MQ=255)
                                                                                                                                                                                                                          ttGTGATCCAGTTCGCCCAGCACATGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccg                                               <  1:392708‑M1/288‑35 (MQ=255)
                                                                                                                                                                                                                           tgtgATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGAt                                                                                                                                                                                  <  1:953047/156‑1 (MQ=255)
                                                                                                                                                                                                                           tgtgATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccg                                               >  2:1198981‑M1/1‑253 (MQ=255)
                                                                                                                                                                                                                                   aGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttga                                      >  2:1712908‑M1/1‑245 (MQ=255)
                                                                                                                                                                                                                                     ttCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACCCGGAAACTAAGATTTACCGGACGAATATCCACGCTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCAACAGTAGCCTCCGGCAACCACGGCGGCAAGTCCCACGTCCGCCAATCCGATCACGACAGGTTTTTTCATACTTACAAACTACTTAGCGATAATccttgcacattcagctcgatacgaacggtcaccgcttgactgatca                                   >  2:1265758‑M1/1‑243 (MQ=255)
                                                                                                                                                                                                                                      tCGCCCACCACCTCGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGTTTCAACGCGCCCCCCAACACGGAAACTAAGATTTCCCGTACGAATATCCACGTTGCCATAAAGCGTCAGGCCGTTATCCTGGCTGCTTATATACCACCCGTAGAATCCGGCAACCACGGCGGCAAGTACCACTACCGACAACCCGATCACCACAGGTTTGTTAATACCTACAAACTCCTTTGCGATAATccttgcaaaatcagttcgatatgacaggccccacactggtagatcag                                  >  2:1532879‑M1/1‑242 (MQ=255)
                                                                                                                                                                                                                                        gCCCAGCACCTGGCCGCCTTTTATAGCAGTACCTTCGACCACCGCCAGCGATTCAACGCGCCCCCCAACACTGAAACTAAGATTTACCGTATGAATATACACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTAGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCTAAGCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagtt                                <  2:283100‑M1/289‑50 (MQ=255)
                                                                                                                                                                                                                                                  tGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttc                      <  1:237446‑M1/289‑60 (MQ=255)
                                                                                                                                                                                                                                                   gtcccgcTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACTCGGAATCTAATATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTGGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATcctttcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttct                     <  1:684518‑M1/287‑61 (MQ=255)
                                                                                                                                                                                                                                                   ggCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatcacaggtcaccgtctggttgatcagttcggtcttttct                     >  2:1762074‑M1/1‑229 (MQ=255)
                                                                                                                                                                                                                                                        gCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatc                >  1:649468‑M1/1‑224 (MQ=255)
                                                                                                                                                                                                                                                            tGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaac            <  1:666692‑M1/289‑70 (MQ=255)
                                                                                                                                                                                                                                                                  cATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgctgt       >  1:417494‑M1/1‑214 (MQ=255)
                                                                                                                                                                                                                                                                  cATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgcggt       >  1:1853111‑M1/1‑214 (MQ=255)
                                                                                                                                                                                                                                                                   aTCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAAAACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgcggt       <  1:1885980‑M1/287‑75 (MQ=255)
                                                                                                                                                                                                                                                                      aCCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgcggtccagc  <  1:1573459‑M1/289‑80 (MQ=255)
                                                                                                                                                                                                                                                                      aCCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgcggtccagc  <  1:726000‑M1/289‑80 (MQ=255)
                                                                                                                                                                                                                                                                      aCCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATccttgcaaaatcaggtcgatatgacaggtcaccgtctggttgatcagttcggtcttttcttcatcgaacgcggtccagc  <  2:1853111‑M1/289‑80 (MQ=255)
                                                                                                                                                                                                                                                                            gTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTTCCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCt                                                                                           <  1:1329474/194‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTTCCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCt                                                                                           >  2:1329474/1‑194 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                            
ATTTTCCAGGTCATTTGCGCTAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTA‑ACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGGCTTTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTGCCATACAGCGTCAGGCCGTTATCCTGGCGGCTTTGATACCACCAGTAGCCTCCGGCAACCACGGCGGCAAGTACCACTACCGCCAATCCGATCACGACAGGTTTTTTCATCACTACAAACTCCTTTGCGATAATTACAAACTCCTTTGGCTTAATCCTTGCAAAATCAGGTCGATATGACAGGTCACCGTCTGGTTGATCAGTTCGGTCTTTT  >  CP042583/692396‑692945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A