Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 699,012 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583699,0120AT100.0% 547.7 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (129/107);  total (129/107)
*CP042583699,0130GC98.7% 543.3 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (129/103);  total (129/107)
Fisher's exact test for biased strand distribution p-value = 9.03e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583699,0140CG99.6% 550.9 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (129/106);  minor base T (0/1);  total (129/107)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 236 total aligned reads displayed.

GCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATT  >  CP042583/698732‑699292
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
      ttCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAg                                                                                                                                                                                                                                                                             <  1:287990/289‑1 (MQ=255)
              tttcgcATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTTCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGGAAATCCCGATgggctt                                                                                                                                                                                                                                                                     >  2:845252/6‑285 (MQ=255)
                     tCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCtg                                                                                                                                                                                                                                                              <  1:845252/289‑1 (MQ=255)
                              cATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACg                                                                                                                                                                                                                                                     >  1:323065/1‑289 (MQ=255)
                                         tCGCGAAGTACTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCtg                                                                                                                                                                                                                                                              >  1:227425/1‑269 (MQ=255)
                                                    tttAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCg                                                                                                                                                                                                                               <  1:267152/289‑1 (MQ=255)
                                                    tttAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCg                                                                                                                                                                                                                               <  1:1488460/289‑1 (MQ=255)
                                                             atCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAAACCAGATGGCTTGCTGCCTGGTGGCTACGGGGGAAGGGGCAACCATCAGCGACGGCCTgg                                                                                                                                                                                                                      >  2:192956/1‑289 (MQ=255)
                                                             atCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCCAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTgg                                                                                                                                                                                                                      >  1:1097316/1‑289 (MQ=255)
                                                              gcggcggGCGGGGTCTACGAATGCATGGTACTAAAGTTGAAGGGGATGCTAATCCGCGGCGCTGCCCGAAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACGGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGgc                                                                                                                                                                                                                     <  2:207292/288‑1 (MQ=255)
                                                                                   tGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTCCGGGTGAAGCGGCCACTATCAGCGCCGGCCTGGCGCGCGTTAATCAGGCAttttc                                                                                                                                                                                                >  2:72572/1‑288 (MQ=255)
                                                                                   tGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTa                                                                                                                                                                                                <  1:1304720/289‑1 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAAt                                                                                                                                                                                              >  1:1029337/1‑287 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAAt                                                                                                                                                                                              >  1:432926/1‑287 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAAt                                                                                                                                                                                              >  2:281733/1‑287 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAAt                                                                                                                                                                                              >  1:1021060/1‑287 (MQ=255)
                                                                                         gTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGCACCGATTCCCGAATCGCTGAAAACCCAGATGGCGTGCTGCCTGGTGGCTACGGGTGAAGCTGCAACCAACAGGGACGGCCTGGCACGCGAGAAACAGGCATTTTAAtttct                                                                                                                                                                                          >  2:1328099/1‑286 (MQ=255)
                                                                                           aCTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCttt                                                                                                                                                                                         >  1:89080/1‑288 (MQ=255)
                                                                                             tGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTtc                                                                                                                                                                                       >  1:799403/1‑288 (MQ=255)
                                                                                               aaGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGTAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATCGAGCGTTTCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGACAATCCAGAGGGCTTGCTGCCTGGTGGCTACGGGTGCAGCGGCAAGCATTAGAGACGTACTGGCGCGCGGTAACCCGGCAGTGTACTTCCTTtcttc                                                                                                                                                                                    >  2:530783/1‑287 (MQ=255)
                                                                                               aaGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCa                                                                                                                                                                                    >  1:1953219/1‑289 (MQ=255)
                                                                                                aGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAg                                                                                                                                                                                   <  1:1425348/289‑1 (MQ=255)
                                                                                                    gtaGTGTATGATAATCCGAAGCGCTGCCAGCGGATATATCTCATTGACCGTGAAGGGAAGCGGTGGCTAAATGAAAAGAAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGAAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               <  2:108666/287‑1 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGt                                                                                                                                                                                                                                                  <  2:1666766/222‑1 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGt                                                                                                                                                                                                                                                  >  1:1666766/1‑222 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               >  1:1165309/1‑289 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               <  1:1632590/289‑1 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               >  1:626908/1‑289 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCCGTCATCAGGCATTTTAATTCTTTTAACAGCCgg                                                                                                                                                                               >  2:877931/1‑289 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCAGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTtg                                                                                                                                                                                                                                                                     >  2:1165682/1‑203 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCACATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCGGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGTGCGTCAATCAGGCATCTTAATTCTTTTCCCAGCCgt                                                                                                                                                                               >  2:252218/1‑288 (MQ=255)
                                                                                                      aGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               <  2:1571387/287‑1 (MQ=255)
                                                                                                      aGTGGATGCTAAGCCGCAGCGCTGCCCGAAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACGGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGAt                                                                                                                                                                             <  2:1964593/289‑1 (MQ=255)
                                                                                                          tATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGaa                                                                                                                                                                                                                                               >  2:73658/1‑219 (MQ=255)
                                                                                                          tATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGaa                                                                                                                                                                                                                                               <  1:73658/219‑1 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCAt                                                                                                                                                                 <  1:82062/289‑1 (MQ=255)
                                                                                                                         cgcTACCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTTGCGCGCGTTAACCAGGCATTTTCATTCCTTTCTTAGCCGGAAGAACCATGTCATCCGGCtt                                                                                                                                                          >  2:995167/1‑289 (MQ=255)
                                                                                                                          gcTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCttt                                                                                                                                                         <  1:1367867/289‑1 (MQ=255)
                                                                                                                              cccGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGTCACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGATTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCATGGCGCGCGTTAATCAGGCCTTTTAATTCTTTTCTCAGCCGGATGAGCCATGCCATCCGGCgttatc                                                                                                                                                      >  2:1109555/1‑285 (MQ=255)
                                                                                                                                        aaTCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAat                                                                                                                                           >  2:62420/1‑289 (MQ=255)
                                                                                                                                        aaTCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAat                                                                                                                                           >  1:773363/1‑289 (MQ=255)
                                                                                                                                         aTCTCATTGACGGTGAACGGGTGGGGGTGCTGTATTAAAAACAGGACCCTGCTGGTAGCGAGTTACTGCCAAAAGCAAAAGAGCCGGAAACCACGGCGCAGTGGATTGAGGGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAata                                                                                                                                          <  2:1097316/289‑1 (MQ=255)
                                                                                                                                              aTTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGaaa                                                                                                                                     <  1:154510/289‑1 (MQ=255)
                                                                                                                                                    cGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCt                                                                                                                                >  1:496004/1‑288 (MQ=255)
                                                                                                                                                      tGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCa                                                                                                                             >  1:1933888/1‑289 (MQ=255)
                                                                                                                                                      tGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCa                                                                                                                             >  2:1295889/1‑289 (MQ=255)
                                                                                                                                                      tGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATGccgg                                                                                                                               >  2:1975549/1‑285 (MQ=255)
                                                                                                                                                        aaGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCCGATGAGCCAGTTCATCCGGCTTTTCACCCCCCCCAATACGAAATTTCtccctt                                                                                                                           >  2:1734332/1‑284 (MQ=255)
                                                                                                                                                        aaGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCACAGCCGGATGAGCCATGTCATGCGGCTTTTTCCTCACCGACATATGAAATTCCTGCa                                                                                                                             >  1:1323333/1‑287 (MQ=255)
                                                                                                                                                              tGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTAtt                                                                                                                     >  1:1736226/1‑289 (MQ=255)
                                                                                                                                                                cGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTa                                                                                                                                                                                                                                                       >  2:1412234/1‑157 (MQ=255)
                                                                                                                                                                cGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTa                                                                                                                                                                                                                                                       <  1:1412234/157‑1 (MQ=255)
                                                                                                                                                                cGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCCCAATATGAAATTCCTGCATCttttttt                                                                                                                    >  2:758986/1‑287 (MQ=255)
                                                                                                                                                                     gCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACTCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑Ctt                                                                                                              >  2:1937636/1‑288 (MQ=255)
                                                                                                                                                                      cTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTAt                                                                                                                      >  2:217248/1‑280 (MQ=255)
                                                                                                                                                                         tATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTAACCCACCGCAATATGAAATTCCTGCATCTTTTTTGCC‑CTTCCCa                                                                                                          >  2:1767017/1‑288 (MQ=255)
                                                                                                                                                                           tGAAAACCAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATTCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGc                                                                                                       <  1:192956/289‑1 (MQ=255)
                                                                                                                                                                           tGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGc                                                                                                       <  2:404906/289‑1 (MQ=255)
                                                                                                                                                                              aaaaCAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGccc                                                                                                     >  2:815689/1‑288 (MQ=255)
                                                                                                                                                                                   cggACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGa                                                                                                                   <  2:1511286/269‑1 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                               >  2:299095/1‑210 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGa                                                                                                                   >  1:1511286/1‑270 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGt                                                                                                >  1:1684395/1‑288 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCCCAATATGAAATTCCTGCATCTTTTTTGAC‑TTCCCCACGCCCGGCGt                                                                                                >  1:913718/1‑288 (MQ=255)
                                                                                                                                                                                     gaaacggctgGTAGCAGGTTACGGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCATTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGGAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTgc                                                                                              <  2:1495769/282‑1 (MQ=255)
                                                                                                                                                                                     gACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTgca                                                                                             >  1:1786366/1‑289 (MQ=255)
                                                                                                                                                                                     gACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCCAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGCAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCCTTTACCCCACCGCAATCTGAAATTCCTGCATCTTTCTTGAC‑CTTCCCACGCCACGCGTgc                                                                                              >  2:1163478/1‑288 (MQ=255)
                                                                                                                                                                                        acTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTGATCAGGCATTTTACTTCTTTTCTCAGCCGGATGATCCATGTCATCCGTCTTTTACCCCACCGCAAATTGAAATTCCTGCCTCTTTCTTGACTCTCCCTACGccgtccgtcagc                                                                                            >  2:1948640/1‑278 (MQ=255)
                                                                                                                                                                                          tgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTAccc                                                                                                                                                    <  1:506453/230‑1 (MQ=255)
                                                                                                                                                                                          tgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATa                                                                                        >  1:1178013/1‑289 (MQ=255)
                                                                                                                                                                                          tgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATa                                                                                        >  1:1388489/1‑289 (MQ=255)
                                                                                                                                                                                               gTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTATGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGAATTTTAATTCTTTTCTCAGCCGGATGAGTCATGTCATCTGGCTTTTACCACACCGCAATATGAAATTCCTGCATCTTGATTGAC‑CTTCACACGCCCGGCCTGTAGCATACAAAt                                                                                   >  1:1070461/1‑289 (MQ=255)
                                                                                                                                                                                                           tGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAAcaca                                                                       <  1:1249379/289‑1 (MQ=255)
                                                                                                                                                                                                            gCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacat                                                                      <  1:973689/289‑1 (MQ=255)
                                                                                                                                                                                                               acaAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacataac                                                                   <  2:1388489/289‑1 (MQ=255)
                                                                                                                                                                                                                caAGCAAAAGGTCCGGGAACAACGGCGCAGTGGATTGTGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAGGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacataaca                                                                  <  2:1058161/289‑1 (MQ=255)
                                                                                                                                                                                                                     aaaaGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAAc                                                             <  1:758986/289‑1 (MQ=255)
                                                                                                                                                                                                                           tCCGGAAACCCCGGCGCAGTGGTTTGGGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGa                                                         <  2:1210514/287‑1 (MQ=255)
                                                                                                                                                                                                                            ccGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGtt                                                      >  1:34286/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGGAAACCACGGCGCAGTGGTTTGAGCGTTGCCTTGCTGGCAGCGACACGCTTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAGCATAAACAGGAGTTa                                                     <  2:1021060/289‑1 (MQ=255)
                                                                                                                                                                                                                             cGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTa                                                     >  1:1353706/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTa                                                     <  2:496004/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAAc                                                             <  1:1101162/272‑1 (MQ=255)
                                                                                                                                                                                                                                               ggATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGt                                      <  1:996716/286‑1 (MQ=255)
                                                                                                                                                                                                                                                    gAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCtt                              <  1:72572/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTg                                                                                               <  1:1237297/223‑1 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTg                                                                                               >  2:1237297/1‑223 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCtt                              <  2:778121/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCtt                              >  1:778121/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTg                            <  1:286880/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        gtgggctggcaggCAGCGAACCGATTCCGGAATAGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGGTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTATCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGa                           <  2:1856922/277‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGa                           <  2:1433134/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGa                           <  2:334585/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCa                                                                                                                             <  1:1975070/189‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAAt                                                                                   <  2:1354361/230‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATacaac                                                                              >  1:212356/1‑235 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATTGAAAGTGGTCATCGCTTTGAt                          >  1:1422344/1‑287 (MQ=255)
                                                                                                                                                                                                                                                            ccTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCAGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAAGTCCTGCATCTCTATTGAC‑CTTCCCTCGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGATTTAACAATGGAAAGTGGTCATCGCTTTGATGcct                      >  2:915629/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                    gCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAACTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCt               >  2:236918/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         gAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGca            <  2:455638/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
GCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAC‑CTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATT  >  CP042583/698732‑699292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A