Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 706,719 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583706,7190GC99.1% 521.1 / NA 226intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (105/119);  total (105/121)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP042583706,7200CG98.7% 510.3 / NA 226intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (103/118);  total (105/121)
Fisher's exact test for biased strand distribution p-value = 6.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583706,7210TA98.2% 509.2 / NA 226intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (105/117);  minor base G (0/4);  total (105/121)
Fisher's exact test for biased strand distribution p-value = 1.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 226 total aligned reads displayed.

GCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGC‑TGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTT  >  CP042583/706441‑706990
                                                                                                                                                                                                                                                                                       ||||                                                                                                                                                                                                                                                                             
gCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGcc                                                                                                                                                                                                                                                                        <  1:1651169/288‑1 (MQ=255)
gCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGc                                                                                                                                                                                                                                                                         <  1:1982841/287‑1 (MQ=255)
  cTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAg                                                                                                                                                                                                                                                                      <  1:450617/288‑1 (MQ=255)
    gATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGa                                                                                                                                                                                                                                                                     >  1:513432/1‑287 (MQ=255)
             tATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGcccc                                                                                                                                                                                                                                                          >  1:984591/1‑289 (MQ=255)
              aTCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACCGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCCAATCTCCAGAGTTCATGCCGATTTCAAACTGAATAAATACCCCGGTGATAATATCTTCCACCAGCGTTTGCGAACCAAACC‑AGAAAGCCAGACCTAATGcccag                                                                                                                                                                                                                                                         >  1:105519/1‑287 (MQ=255)
               gcaacATCTTCATGTCGACAAACATCATAACTTGACCCCACCGAACCAAGGCA‑GCGTACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCgg                                                                                                                                                                                                                                                        <  2:1464500/285‑1 (MQ=255)
                            tgCGAGCAACGTCATAATGTGACACCAC‑CGGCCCACGCCAGCGGCGAAAGTTCGCAAAGGTGGGTATAGAACACCACGGAGTAATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATACTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATACATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAAGGCCCCGGCACCTGCCAGCaa                                                                                                                                                                                                                                           <  2:1104830/288‑1 (MQ=255)
                             gCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCaa                                                                                                                                                                                                                                           <  2:1968339/288‑1 (MQ=255)
                             gCGATCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAAt                                                                                                                                                                                                                                          >  2:17149/1‑289 (MQ=255)
                                aTCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATgg                                                                                                                                                                                                                                        >  2:1621094/1‑288 (MQ=255)
                                aTCAACATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATgg                                                                                                                                                                                                                                        >  1:681095/1‑288 (MQ=255)
                                   aaCATCATAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGcgcg                                                                                                                                                                                                                                    >  2:413113/1‑289 (MQ=255)
                                          tAATTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTg                                                                                                                                                                                                                              >  1:730658/1‑288 (MQ=255)
                                            aTTTGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGGTTTCAACCTGAATAAATACCCCGGTGATAATAACTTTCACCAGCGATTGCGAACCAACCG‑ACATAGCCCGACCTACTACCCCCGAACCCCCCAGCAATGGcgcgcaagtgac                                                                                                                                                                                                                            >  2:830708/1‑280 (MQ=255)
                                              tttccaccaCCTAACCAAGGCC‑GCGGGCAAAGTTATCAAAGGTGGTTATCGAAGACCACGGAATGTTGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGcc                                                                                                                                                                                                                                                                        <  2:1246676/239‑1 (MQ=255)
                                               tGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCg                                                                                                                                                                                                                        >  1:790005/1‑289 (MQ=255)
                                               tGCCACCACCGAACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AAATAGCCAGACCTAATGCCCCGTCACCTGCCAGCACTGGCGCGatgattccgcac                                                                                                                                                                                                                        >  2:1495644/1‑279 (MQ=255)
                                                          aaCCAATGCC‑GCGGACAAAGTTAGCAAAGGAGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCAGAtctccgaca                                                                                                                                                                                                              >  1:1325228/2‑283 (MQ=255)
                                                           aCCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccgacaac                                                                                                                                                                                                            <  1:1042383/289‑8 (MQ=255)
                                                             tcaTGCC‑GCGGAAAAAGTTAGCAAAGGGGGTTAACGAACACAGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAacac                                                                                                                                                                                                          <  2:2186/287‑1 (MQ=255)
                                                                tGCC‑GCGGACAAAGGTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGTCCCGATAGTCACCAAATCTCAGGTGTTCATGCCGTTTTAAAACTGAATAAATACCCCGGTGATAAAATCTTTCACCAGCGTTTGCGAACCAAACG‑AGACAGCACAACATAATGCCCCGGCACCGGACAGCAATTGCGCGATATTCACTGCCAGTTCCGTCAACACaac                                                                                                                                                                                                       >  2:1948201/1‑288 (MQ=255)
                                                                   c‑gcgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCa                                                                                                                                                                                                     <  1:498149/288‑1 (MQ=255)
                                                                        gACAAAGTTGTCAAAGGTGGGTGTCCAAGACCACGGAATGAGATGATACGCCCCGGTATCCTGTCTTACGCCCACGGAGCGAATCTACATCCGTTCCACTGTGCCGGTAAACGTCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                                                                                                                                                 <  2:800637/288‑1 (MQ=255)
                                                                        gACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                                                                                                                                                 <  1:1297548/288‑1 (MQ=255)
                                                                          cAAAGTTAGCAAAGGTGCTTATCGAAGACCCCGGAATGATGTGATACGCCCCGTTATCCTGTCGTACTCCCCCGGAGCGAATCGACATCCGTTCCACTGTGCCGTTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggt                                                                                                                                                                                              <  1:746420/289‑1 (MQ=255)
                                                                                     aaGGTGGTTAGTGAAGACCACGGAATGATGGGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGa                                                                                                                                                                                   <  2:896994/289‑1 (MQ=255)
                                                                                       ggtggtTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccga                                                                                                                                                                                                                >  1:27737/1‑255 (MQ=255)
                                                                                         tggtTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                                                                                                                                                 <  1:1739476/271‑1 (MQ=255)
                                                                                         tggtTATCGAAGACAACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                                                                                                                                                 >  2:1739476/1‑271 (MQ=255)
                                                                                           gttatcgaaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATc                                                                                                                                                                              >  1:581099/9‑288 (MQ=255)
                                                                                                  aaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCa                                                                                                                                                                       >  1:1856343/2‑288 (MQ=255)
                                                                                                    aaCCACGGAGTGATGTGTTACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCTACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                    <  1:1473124/288‑1 (MQ=255)
                                                                                                      ccccGGAACTATGTCACACCCCCCGGTACCCTGTCGTCCGCCCCCGGACGGAAACGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAATCACCAAATCGCCCGTGTTCATGCCATTTTCAAACTGAATCAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGACGGTACTGATAATCACCGCCAGcgcg                                                                                                                                                                  <  2:232373/286‑1 (MQ=255)
                                                                                                      ccAAGGAATGAGGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                    <  1:252977/287‑1 (MQ=255)
                                                                                                       cACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGt                                                                                                                                                                 >  1:621711/1‑289 (MQ=255)
                                                                                                         cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGtt                                                                                                                                                                >  2:1684446/1‑288 (MQ=255)
                                                                                                         cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCCCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTTCCAGCAATGGCGCGATATTGACGCCGATTTCCACCAACCCAACCATGCAGGTAAGGGGAATGATCATCCACGCCAGcccgct                                                                                                                                                                >  2:1267669/1‑286 (MQ=255)
                                                                                                             atgctgggcaaccccccGGTATCCTGTCGCACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTAAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                           <  2:1813959/276‑1 (MQ=255)
                                                                                                             atgatgTGATACGCCCCGGTATCCTGTCGGACGCCACCGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAAGGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                           <  2:507736/289‑1 (MQ=255)
                                                                                                                agggaatccGCCCCGGTAGCCGGTCGTACGCCAACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaaa                                                                                                                                                          <  2:1540159/279‑1 (MQ=255)
                                                                                                                 tgtgATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACa                                                                                                                                                        >  1:1246232/1‑288 (MQ=255)
                                                                                                                    gATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCg                                                                                                                                                     <  1:1621094/288‑1 (MQ=255)
                                                                                                                     aTACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAg                                                                                                                                                       <  1:278901/285‑1 (MQ=255)
                                                                                                                     aTACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGGGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAg                                                                                                                                                       >  2:278901/1‑285 (MQ=255)
                                                                                                                          ccccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCCATGGCGCGATATTGACGCCCATTTCCGACAACACAATCATTATGGTGATGGTACTGCTAATCACCGCCAGCGCGGTACGAAACAGCGTAAGCAg                                                                                                                                              >  1:1336538/1‑289 (MQ=255)
                                                                                                                          ccccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                 <  2:273174/286‑1 (MQ=255)
                                                                                                                          ccccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                 >  2:1290845/1‑286 (MQ=255)
                                                                                                                           cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCCCCTGCCCGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGGTATGGTACTGCAAATACACACCCGCGAGGTACGAAACAGCGTAAGCAgg                                                                                                                                             >  2:1077015/1‑289 (MQ=255)
                                                                                                                           cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtg                                                                                                                                                                                             <  1:1688347/241‑1 (MQ=255)
                                                                                                                           cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAgg                                                                                                                                             >  1:1965194/1‑289 (MQ=255)
                                                                                                                            ccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                    >  2:1915784/1‑265 (MQ=255)
                                                                                                                             cGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGt                                                                                                                                           >  1:223992/1‑289 (MQ=255)
                                                                                                                               gTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGAGATGGTACTGATAATAACCGCCAGCGCGCTACGAAACAGCGAAAGCAGGGTa                                                                                                                                          >  1:1392352/1‑288 (MQ=255)
                                                                                                                                     tGTCGTGCGCCCCCGGAGAGAATCGAAATACGGTCACGTGGGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGCCGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGc                                                                                                                                   <  2:810270/289‑1 (MQ=255)
                                                                                                                                          tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccgacaaca                                                                                                                                                                                                           >  1:676516/1‑204 (MQ=255)
                                                                                                                                          tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAacac                                                                                                                                                                                                          <  1:1606357/213‑1 (MQ=255)
                                                                                                                                          tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGCTGGTACCTATAATCACCGCCAGCGCGTCACGAAACAGCGTAAGCAGGGGACGAGTCCGGgcg                                                                                                                              >  2:1129159/1‑289 (MQ=255)
                                                                                                                                          tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgc                                                                                                                               >  1:836483/1‑288 (MQ=255)
                                                                                                                                               ccACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAAGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTAAGCGTGCGGTCGCgggg                                                                                                                         >  1:204094/1‑289 (MQ=255)
                                                                                                                                                 aCGGGGCGAATCGACATCCGTTCCACTGGGCCGGTCAACGGCCCGCTAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCGGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTa                                                                                                                       <  2:248013/289‑1 (MQ=255)
                                                                                                                                                 aCGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACGAAATCTCCAGTGGTCATGCCGTTTTCAAACTGAATAAATACCCGGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGAGAGCCAGACCTAATGCCCCGGCAGCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAAGCACCGCCAGCGTGTTACGAAACAGCGTAAGCAGGGGACGAGTGCGGGCGCGGGGTa                                                                                                                       >  1:731378/1‑289 (MQ=255)
                                                                                                                                                         aatcgacATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTa                                                                                                                                                   >  1:1490680/7‑253 (MQ=255)
                                                                                                                                                           tcgccATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGcc                                                                                                             <  1:154880/285‑1 (MQ=255)
                                                                                                                                                              acATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                           >  2:679483/2‑240 (MQ=255)
                                                                                                                                                               cctCCGTTGCACTGTGCCGGTCCACGGCCCAATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACGGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATg                                                                                                          <  2:1236653/286‑1 (MQ=255)
                                                                                                                                                                accgcttcaccTGTGCCGATAAACGGCCAGATAGTCAACAAACCTCCGGTGTTAATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCTTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGaa                                                                                                        <  2:1525263/279‑1 (MQ=255)
                                                                                                                                                                             tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtgatgg                                                                                                                                                                                         >  1:1868475/1‑195 (MQ=255)
                                                                                                                                                                             tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtgatgg                                                                                                                                                                                         <  2:1868475/195‑1 (MQ=255)
                                                                                                                                                                             tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                 <  2:865604/235‑1 (MQ=255)
                                                                                                                                                                               ccGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAagccagcc                                                                                         >  1:171328/1‑289 (MQ=255)
                                                                                                                                                                                    cAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGtt                                                                                     <  1:879174/288‑1 (MQ=255)
                                                                                                                                                                                       cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccga                                                                                                                                                                                                                >  1:125928/1‑159 (MQ=255)
                                                                                                                                                                                       cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCg                                                                                 >  2:62546/1‑289 (MQ=255)
                                                                                                                                                                                       cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGGTTTCg                                                                                 >  1:1521389/1‑289 (MQ=255)
                                                                                                                                                                                             gttAGTCACCAAATATCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACCGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCaaa                                                                           <  1:765860/287‑1 (MQ=255)
                                                                                                                                                                                                    aCCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGa                                                                    >  1:1215607/1‑289 (MQ=255)
                                                                                                                                                                                                     ccAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAg                                                                   <  1:413113/289‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATTGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCa                                                                 <  1:1810771/289‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCa                                                                 <  1:1533601/289‑1 (MQ=255)
                                                                                                                                                                                                            tcCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGa                                                                                                                                                                                                                                   >  2:683246/1‑122 (MQ=255)
                                                                                                                                                                                                            tcCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGcgcg                                                                                                                                                                  <  2:130433/187‑1 (MQ=255)
                                                                                                                                                                                                            tcCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGcgcg                                                                                                                                                                  >  1:130433/1‑187 (MQ=255)
                                                                                                                                                                                                                gtgtTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGa                                                                                                         >  2:1336914/1‑240 (MQ=255)
                                                                                                                                                                                                                 tgtTCATACCTTCTTAAAACTGAATAAATACCCCGGGGATAATATCTTTCCCCAGCGTTTGCGAACCAACCG‑AAATAGCCAGACCGAATGCCCCGGCACCTGCCCGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGcc                                                       <  2:581099/289‑1 (MQ=255)
                                                                                                                                                                                                                      aTGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAAcc                                                   >  1:1913335/1‑288 (MQ=255)
                                                                                                                                                                                                                        gCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                    <  1:128498/173‑1 (MQ=255)
                                                                                                                                                                                                                              ttCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATACCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCCCCGTCCAGCCAACcgccgcgcag                                          >  2:1429534/1‑282 (MQ=255)
                                                                                                                                                                                                                                 aaaCTGAATAAATACCCCGGTGTTAATATCTTTCCCCAGCGTTTGCGAACCAAAGA‑GGATAGCACGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGaagaaa                                       <  2:1928983/289‑1 (MQ=255)
                                                                                                                                                                                                                                      gAATAAATCCCCCGGTGTGTATATGTTTCCCCAGCGTTT‑GCGAACAAACCGAGATAGCCACACCTAATTCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACGCAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCTAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                  <  2:968918/289‑1 (MQ=255)
                                                                                                                                                                                                                                      gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                               >  1:1554121/1‑180 (MQ=255)
                                                                                                                                                                                                                                      gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                               <  2:1554121/180‑1 (MQ=255)
                                                                                                                                                                                                                                      gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                  >  1:1928983/1‑289 (MQ=255)
                                                                                                                                                                                                                                      gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATAAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAATGAAt                                  <  2:767265/289‑1 (MQ=255)
                                                                                                                                                                                                                                           agtaCCCCAGTAATAATAGCTTACACCACCGTTGGCGAACCAAACG‑AGAAAGCCAGACCTAAGGCCCCGGCACCGGCCAGCAATGGCACGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGGTAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTg                             <  2:368085/287‑1 (MQ=255)
                                                                                                                                                                                                                                                cccGGTTATAATATCTGTCGCCAGCGTTTGCGAACCAAACG‑AGATCGCCAGCCCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTGCCTACAACACAATCATGATGGTGATGGTACTGATAAGCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATa                        <  1:1101426/289‑1 (MQ=255)
                                                                                                                                                                                                                                                cccGGGGATAATACCGTGCACAAGCGTTGGCGAACCAAACG‑AGATAGCACGACCTAAGGGCCCGGCACCAGCCAGCAATGGCGCGATATGGACGCCGATTTCAGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATa                        <  2:1851557/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAgcggg                                                                                                                  <  1:1817220/198‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATAc                       >  1:1270081/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               tttCACCAGCGTTTGCGAACCAAACG‑AGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGAACCGTCCAGGCAACCGCCGAGaagaaaa                                      >  1:360599/1‑260 (MQ=255)
                                                                                                                                                                                                                                                                                       ||||                                                                                                                                                                                                                                                                             
GCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCC‑GCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGC‑TGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTT  >  CP042583/706441‑706990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A