Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 706,782 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583706,7820GC99.6% 539.7 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (114/116);  minor base A (0/1);  total (114/117)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583706,7830CG99.6% 533.5 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (112/116);  total (114/117)
Fisher's exact test for biased strand distribution p-value = 4.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583706,7840TA99.1% 536.4 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (111/116);  minor base C (1/1);  total (114/117)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 231 total aligned reads displayed.

CAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAACAGCAACATTACC  >  CP042583/706502‑707061
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
tcaTGCCGCGGAAAAAGTTAGCAAAGGGGGTTAACGAACACAGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑acac                                                                                                                                                                                                                                                                                  <  2:2186/287‑1 (MQ=255)
   tGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACaa                                                                                                                                                                                                                                                                                >  1:1813959/1‑288 (MQ=255)
      cgcgGACAAAGTGAGCAAAGGAGGTTATCGAAGACCACGGAAGGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCa                                                                                                                                                                                                                                                                             <  2:1097784/288‑1 (MQ=255)
         ggACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑TCACAATCatgat                                                                                                                                                                                                                                                                         <  1:1297520/289‑1 (MQ=255)
          gACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCatgat                                                                                                                                                                                                                                                                         <  2:730658/288‑1 (MQ=255)
            cAAAGTTAGCAAAGGTGCTTATCGAAGACCCCGGAATGATGTGATACGCCCCGTTATCCTGTCGTACTCCCCC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGTTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggt                                                                                                                                                                                                                                                                      <  1:746420/289‑1 (MQ=255)
              aaGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggtga                                                                                                                                                                                                                                                                    <  1:1883624/289‑1 (MQ=255)
               aGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGACGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAACTACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCACCGGCACCTGCCAGCAATAGCGCGATATTGACCCCGA‑TTCCCGCAGACACAATCAtaatggtgat                                                                                                                                                                                                                                                                   >  1:756112/1‑289 (MQ=255)
                 ttAGCAAAGGTGGTTATGGAAGACAACCGAATGATGTGCTACGCCCCGGTATCCGGTCGTACGCCCAC‑GGAGCGAATCGACACCCGTTCCCCTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggtgatgg                                                                                                                                                                                                                                                                 <  2:2359/289‑1 (MQ=255)
                           tggtTATCGAAGACAACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCatgat                                                                                                                                                                                                                                                                         >  2:1739476/1‑271 (MQ=255)
                             gttatcgaaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATc                                                                                                                                                                                                                                                      >  1:581099/9‑288 (MQ=255)
                                        ccAAGGAATGAGGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                                                                                            <  1:252977/287‑1 (MQ=255)
                                           cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGtt                                                                                                                                                                                                                                        >  2:1684446/1‑288 (MQ=255)
                                               atgctgggcaaccccccGGTATCCTGTCGCACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTAAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                                                                                                   <  2:1813959/276‑1 (MQ=255)
                                               atgatgTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                                                                                                   <  1:1510241/289‑1 (MQ=255)
                                               atgatgTGAGACGCCCCGTTATCCTGCCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                                                                                                   <  2:681095/289‑1 (MQ=255)
                                                tgatgTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaaa                                                                                                                                                                                                                                  <  1:338164/289‑1 (MQ=255)
                                                  agggaatccGCCCCGGTAGCCGGTCGTACGCCAAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaaa                                                                                                                                                                                                                                  <  2:1540159/279‑1 (MQ=255)
                                                   tgtgATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACa                                                                                                                                                                                                                                >  1:1540159/1‑288 (MQ=255)
                                                   tgtgATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACa                                                                                                                                                                                                                                >  1:1246232/1‑288 (MQ=255)
                                                      gATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCg                                                                                                                                                                                                                             <  1:1621094/288‑1 (MQ=255)
                                                       aTACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAg                                                                                                                                                                                                                               <  1:278901/285‑1 (MQ=255)
                                                       aTACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGGGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAg                                                                                                                                                                                                                               >  2:278901/1‑285 (MQ=255)
                                                        tACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTaa                                                                                                                                                                                                                          >  1:1485912/1‑289 (MQ=255)
                                                           gCCCCGGTATCCTGTCCGCCGCCAACGGGAGTAAACG‑ACATCCGTTCCACTGTGCCGGTCAACGGCCCGCTAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGGGATAGCCAGACCTAATGCCCCGGCACCGGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                                                                                                       <  2:1207150/289‑1 (MQ=255)
                                                            ccccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCCATGGCGCGATATTGACGCCCATTTCCGACA‑ACACAATCATTATGGTGATGGTACTGCTAATCACCGCCAGCGCGGTACGAAACAGCGTAAGCAg                                                                                                                                                                                                                      >  1:1336538/1‑289 (MQ=255)
                                                            ccccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                                                                                         <  2:273174/286‑1 (MQ=255)
                                                            ccccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                                                                                         >  1:273174/1‑286 (MQ=255)
                                                             cccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAgg                                                                                                                                                                                                                     >  1:1965194/1‑289 (MQ=255)
                                                             cccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAgg                                                                                                                                                                                                                     >  1:1067518/1‑289 (MQ=255)
                                                             cccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAgg                                                                                                                                                                                                                     >  1:1525263/1‑289 (MQ=255)
                                                              ccGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                                                                                            <  1:1915784/265‑1 (MQ=255)
                                                               cGGTATCCTGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGt                                                                                                                                                                                                                   >  1:223992/1‑289 (MQ=255)
                                                                       tGTCGTACGCCCCC‑GGGGCCAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGc                                                                                                                                                                                                           <  2:790005/289‑1 (MQ=255)
                                                                       tGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggtga                                                                                                                                                                                                                                                                    <  1:1857120/232‑1 (MQ=255)
                                                                       tGTCGTACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggtga                                                                                                                                                                                                                                                                    >  2:1857120/1‑232 (MQ=255)
                                                                            tACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑acac                                                                                                                                                                                                                                                                                  >  2:1606357/1‑213 (MQ=255)
                                                                            tACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑acac                                                                                                                                                                                                                                                                                  <  1:1606357/213‑1 (MQ=255)
                                                                            tACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGCTGGTACCTATAATCACCGCCAGCGCGTCACGAAACAGCGTAAGCAGGGGACGAGTCCGGgcg                                                                                                                                                                                                      >  2:1129159/1‑289 (MQ=255)
                                                                            tACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgc                                                                                                                                                                                                       >  1:836483/1‑288 (MQ=255)
                                                                            tACGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGAAGGTGATGGTACTGATAATCACCGCCAGCGCGTCACGAACCAGGCTAAGCAGGTCACGCTTGCGGgc                                                                                                                                                                                                       >  2:889487/1‑288 (MQ=255)
                                                                             aCGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgcg                                                                                                                                                                                                      <  2:1246232/288‑1 (MQ=255)
                                                                              cGCCCAC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgc                                                                                                                                                                                                       >  1:954120/1‑286 (MQ=255)
                                                                                   aC‑GGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTa                                                                                                                                                                                               >  1:1115581/1‑289 (MQ=255)
                                                                                          gcgaatcgaagtccttCCCCTGGGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAgcggg                                                                                                                                                                                          <  2:1973629/274‑1 (MQ=255)
                                                                                            aatcgacATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTa                                                                                                                                                                                                                           <  2:1490680/247‑1 (MQ=255)
                                                                                            aatcgacATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTa                                                                                                                                                                                                                           >  1:1490680/7‑253 (MQ=255)
                                                                                                 acATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                                                                                                   <  1:679483/239‑1 (MQ=255)
                                                                                                             cTGGGCCGGTCAAAGGCCCGATAGTCAACAAATCTCCAGTGTTCATGCCGTTTTAAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑ccgaagc                                                                                                                                                                     <  2:827106/289‑7 (MQ=255)
                                                                                                                tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                                                                                            <  1:176578/216‑1 (MQ=255)
                                                                                                                     gTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATAAATAT‑CCGAAGCCAGCCGGt                                                                                                                                                             >  1:767265/1‑289 (MQ=255)
                                                                                                                       cAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGtt                                                                                                                                                            <  1:879174/288‑1 (MQ=255)
                                                                                                                          cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCCAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACACCGATCTCCGACA‑ACACAAACATGATGGAGATGGTACTGATAATCACCGCCAGCGGGTAACAAAACAGCGTAAGCAGGGTTAGCGGTCGGGCGCTGGGTAGCGGGCGGCCATGACAATACGC‑AGCCAGCCggctctca                                                                                                                                                        >  2:807675/1‑283 (MQ=255)
                                                                                                                          cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCatgat                                                                                                                                                                                                                                                                         <  1:201110/177‑1 (MQ=255)
                                                                                                                          cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCAtgatggtga                                                                                                                                                                                                                                                                    >  1:1733897/1‑182 (MQ=255)
                                                                                                                          cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCg                                                                                                                                                        >  1:368085/1‑289 (MQ=255)
                                                                                                                          cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCg                                                                                                                                                        >  2:62546/1‑289 (MQ=255)
                                                                                                                                       aCCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGa                                                                                                                                           >  1:1215607/1‑289 (MQ=255)
                                                                                                                                        ccAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAg                                                                                                                                          <  1:413113/289‑1 (MQ=255)
                                                                                                                                          aaaTCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAAGACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCa                                                                                                                                        <  2:421040/289‑1 (MQ=255)
                                                                                                                                               tcCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGcgcg                                                                                                                                                                                                                                          >  1:130433/1‑187 (MQ=255)
                                                                                                                                               tcCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGcgcg                                                                                                                                                                                                                                          <  2:130433/187‑1 (MQ=255)
                                                                                                                                                    tgtTCATACCTTCTTAAAACTGAATAAATACCCCGGGGATAATATCTTTCCCCAGCGTTTGCGAACCAACCGAAATAGCCAGACCGAATGCCCCGGCACCTGCCCGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGcc                                                                                                                              <  2:581099/289‑1 (MQ=255)
                                                                                                                                                         aTGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                                                                                         >  1:1549656/1‑194 (MQ=255)
                                                                                                                                                           gCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                                                                                            >  2:128498/1‑173 (MQ=255)
                                                                                                                                                                 ttCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAC‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCCCCGTCCAGCCAACcgccgcgcag                                                                                                                 >  2:1429534/1‑282 (MQ=255)
                                                                                                                                                                    aaaCTGAATAAATACCCCGGTGTTAATATCTTTCCCCAGCGTTTGCGAACCAAAGAGGATAGCACGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGaagaaa                                                                                                              <  2:1928983/289‑1 (MQ=255)
                                                                                                                                                                         gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                                                                                                       <  2:1554121/180‑1 (MQ=255)
                                                                                                                                                                         gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                                                                                         <  2:954120/289‑1 (MQ=255)
                                                                                                                                                                           aatacaacaccGGTGTTACTACCTTTCACGTGCGTTTGCGAACCAAACAGGATAGCCAGCCCTAATGCCCCGGCACCTGCAAGCAATGGGGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGa                                                                                                       <  2:1521389/280‑1 (MQ=255)
                                                                                                                                                                             aaaaaCCCCGTGGTTAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGt                                                                                                     <  2:1913335/289‑1 (MQ=255)
                                                                                                                                                                              aataCCCCGGTGATAATCTCTTTCACCAGCGTTGGCGAACCAACCGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTg                                                                                                    <  2:514088/289‑1 (MQ=255)
                                                                                                                                                                                    ccGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATAc                                                                                              >  1:1270081/1‑289 (MQ=255)
                                                                                                                                                                                        tgttaaaaTCTTTAGCCGGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGGGGGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGa                                                                                           <  2:1965194/285‑1 (MQ=255)
                                                                                                                                                                                         gATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGAt                                                                                          <  1:1350742/288‑1 (MQ=255)
                                                                                                                                                                                         gATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATc                                                                                         <  2:171328/289‑1 (MQ=255)
                                                                                                                                                                                           taataTCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAg                                                                                       <  1:62546/289‑1 (MQ=255)
                                                                                                                                                                                            aataTCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAgg                                                                                      <  1:73097/289‑1 (MQ=255)
                                                                                                                                                                                                 cTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGata                                                                                   >  1:170574/1‑287 (MQ=255)
                                                                                                                                                                                                   ttCACCAGCGTTTGCGAACCAAACGAGATAGCCAGCCCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTa                                                                               <  1:532408/289‑1 (MQ=255)
                                                                                                                                                                                                                                aGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAg                                                   >  1:1581633/1‑288 (MQ=255)
                                                                                                                                                                                                                                  ccAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAAACATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGACTAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGACAAGAAAAGAATGAGTACGATACCGAACAGGATATCTAAGGTTTTCTGCCCCGCGCCGTTTTGCAGCCa                                                >  1:1800070/1‑289 (MQ=255)
                                                                                                                                                                                                                                      aCCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGtt                                             >  1:1671431/1‑288 (MQ=255)
                                                                                                                                                                                                                                      aCCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGtt                                             >  1:400545/1‑288 (MQ=255)
                                                                                                                                                                                                                                            tGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATc                                                                                         >  2:252402/1‑238 (MQ=255)
                                                                                                                                                                                                                                                ccGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGa                                  >  1:145528/1‑289 (MQ=255)
                                                                                                                                                                                                                                                ccGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCCAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGGGCGATACGGATCAGGATATCTACGGTTTTCCGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGa                                  >  2:761271/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         gCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTaa                                                                                                                                                                                                                          <  1:55198/97‑1 (MQ=255)
                                                                                                                                                                                                                                                         gCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGACAAGAATGAGTGCGATACGGAt                                                                                          >  2:974275/1‑224 (MQ=255)
                                                                                                                                                                                                                                                         gCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGAt                                                                                          <  1:974275/224‑1 (MQ=255)
                                                                                                                                                                                                                                                         gCCAGCAATGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAAt                                     >  2:314312/1‑277 (MQ=255)
                                                                                                                                                                                                                                                               aaTGGCGCGATATTGACGCCGATTTCCGACA‑CCACAATCATGATGGTGATGGTACTCATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATgcg                    <  1:1948201/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tGGCGCGATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGaa                                 >  1:1002549/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                   gggcgATATTGACGCCGCTTGCCGACA‑CCACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCa                <  2:381359/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgcgATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAAc              >  1:475393/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    cgcgATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAAc              >  1:278036/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    cgcgATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAAc              >  1:1687783/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    cgcgATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAAc              >  1:1047305/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       gATATTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAACAg            <  1:1611174/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tatTGACGCCGATTTCCGACA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCCCAACAGCa          >  1:131704/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
CAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC‑GGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCA‑ACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATAT‑CGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTTCTGCCCCGCGCCGTTTTGCAGCCAGTTCCAGAAATCGAACAATCCCCATGCGCTCAACAGCAACATTACC  >  CP042583/706502‑707061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A