Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 715,285 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583715,2850GC99.3% 634.7 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (135/136);  total (135/138)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583715,2860CG98.9% 620.5 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/2);  new base G (133/136);  total (135/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583715,2870TA100.0% 648.2 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (135/138);  total (135/138)

Only 100 of 273 total aligned reads displayed.

CCAGGTTTTGCACGGGAGCAACAAAAAATGTCGCCACACTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTGCTCTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGGC‑TACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGGCTCTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGGCTTTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAATACCTGCAAGAGTGCGTGAAGAGT  >  CP042583/715008‑715566
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
   ggTTTTGCACGGGAGCAACAAAAAATGTCGCCACACTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGa                                                                                                                                                                                                                                                                               >  1:1137260/1‑288 (MQ=255)
     ttttGCACGGGAGCAACAAAAAATGTCGCCACACTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGAcc                                                                                                                                                                                                                                                                             <  2:1437614/288‑1 (MQ=255)
              ggAGCAACAAAAAATGTCGCCACACTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACttttt                                                                                                                                                                                                                                                                   >  1:1578720/1‑289 (MQ=255)
                                  cacaCTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGc                                                                                                                                                                                                                                              <  1:229133/289‑1 (MQ=255)
                                   acacTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGcc                                                                                                                                                                                                                                             <  2:1385209/289‑1 (MQ=255)
                                         aaTACCAGACACAGGCGGTCAAAGGTATTCCAGCGCGCTTTTTAATTCTCTGTTTTTAGCCTGATTGCTATTACGCCGGGCGAAAAAATAAATAAGCCGACCAGGTAGCTGTACCAAGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATagc                                                                                                                                                                                                                                        <  2:1855852/288‑1 (MQ=255)
                                          aTACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATagcaa                                                                                                                                                                                                                                      <  1:379268/289‑1 (MQ=255)
                                               aGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATTCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCAGAGCAAAAGGGAAATAAGAAGCCGCCACCAGCG‑AACGGACACCGACCAAAACTTTTT‑TGCGCCGAGGCAAGTGTCGCCATacaaaaagca                                                                                                                                                                                                                                 >  2:587543/1‑289 (MQ=255)
                                                   acaGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAAt                                                                                                                                                                                                                             >  1:102613/1‑289 (MQ=255)
                                                   acaGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAAt                                                                                                                                                                                                                             >  1:246516/1‑289 (MQ=255)
                                                   acaGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAAt                                                                                                                                                                                                                             >  1:1392513/1‑289 (MQ=255)
                                                   acaGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGCCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AAATGACCCCGACCAAAACTTTTGGTACG‑CGAGGCAAGGTTCGCCATAGCAAAAGCAAAAt                                                                                                                                                                                                                             >  2:1613245/1‑289 (MQ=255)
                                                       gCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAACCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGcc                                                                                                                                                                                                                         >  2:275890/1‑289 (MQ=255)
                                                           tCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTaa                                                                                                                                                                                                                     >  1:1296875/1‑289 (MQ=255)
                                                           tCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTaa                                                                                                                                                                                                                     >  1:636047/1‑289 (MQ=255)
                                                            cGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCAATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTaaa                                                                                                                                                                                                                    <  1:468738/289‑1 (MQ=255)
                                                                  tATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCa                                                                                                                                                                                                                <  1:620475/287‑1 (MQ=255)
                                                                  tATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAg                                                                                                                                                                                                               <  1:133487/288‑1 (MQ=255)
                                                                  tATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAg                                                                                                                                                                                                               <  2:1913544/288‑1 (MQ=255)
                                                                     tCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGgt                                                                                                                                                                                                           >  2:170652/1‑289 (MQ=255)
                                                                           gcgcTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTagag                                                                                                                                                                                                     <  2:246516/289‑1 (MQ=255)
                                                                            cgcTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGc                                                                                                                                                                                                    >  1:76441/1‑289 (MQ=255)
                                                                                   tCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAACCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGa                                                                                                                                                                                             <  1:275890/289‑1 (MQ=255)
                                                                                        ctctTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAgggg                                                                                                                                                                                        <  1:1290045/289‑1 (MQ=255)
                                                                                        ctctTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAgggg                                                                                                                                                                                        <  1:1605931/289‑1 (MQ=255)
                                                                                         tctTTTTTTCGCCTGATTGCTATTACGGCGAGCGCAAAAATAAAGAAGACGGCCAGGTAGCTATACCACGGACAAATCGTCAGGATTTCGGTCGACTCTGCCATATTGGGGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGt                                                                                                                                                                                       <  2:1341345/289‑1 (MQ=255)
                                                                                            ttttttCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAAc                                                                                                                                                                                    <  1:1709298/289‑1 (MQ=255)
                                                                                                  cgctggATTGCTATTACGCCGAGCTCAAAAATAAATAAGCCAACCGGGTAGCTGTACCACGAAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTTGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCC‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGc                                                                                                                                                                              <  1:1839507/284‑1 (MQ=255)
                                                                                                  aggggacatGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCTGGTAGCTTTACAACGGAAAAATCGTAAGGATTTCGGTCGACTCTGCCAGATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTATGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGc                                                                                                                                                                              <  2:1591927/281‑1 (MQ=255)
                                                                                                   gCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGcc                                                                                                                                                                             >  2:1082888/1‑289 (MQ=255)
                                                                                                       gATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAgg                                                                                                                                                                         <  1:1427158/289‑1 (MQ=255)
                                                                                                       gATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAgg                                                                                                                                                                         <  1:792764/289‑1 (MQ=255)
                                                                                                        aTTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGt                                                                                                                                                                        >  2:346833/1‑289 (MQ=255)
                                                                                                                    ccGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcg                                                                                                                                                            >  1:164641/1‑287 (MQ=255)
                                                                                                                     cGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcga                                                                                                                                                           <  1:1868387/289‑4 (MQ=255)
                                                                                                                     cGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcga                                                                                                                                                           <  2:64660/289‑4 (MQ=255)
                                                                                                                      gAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTAcg                                                                                                                                                                                                                                                              >  1:911449/1‑190 (MQ=255)
                                                                                                                       agggcACAAATAAATAAGCCGACACGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCAGATTGGTGGAGTGCAATGCCAGCAAAGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcgact                                                                                                                                                         <  2:1552581/286‑6 (MQ=255)
                                                                                                                       aGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAGAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcg                                                                                                                                                            >  2:475756/1‑284 (MQ=255)
                                                                                                                       aGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAg                                                                                                                                                                                                               >  2:1231/1‑235 (MQ=255)
                                                                                                                       aGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAgcg                                                                                                                                                            >  1:1314412/1‑284 (MQ=255)
                                                                                                                            aaaaaTCAAATAGGCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTAGGTAGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTaaa                                                                                                                                                    <  2:1098153/289‑1 (MQ=255)
                                                                                                                            aaaaaTAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTAAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTaaa                                                                                                                                                    <  2:1288535/289‑1 (MQ=255)
                                                                                                                                  aaataaGCCGACCATGTAACTGTACCACGGAAAAATCGTCAGGATTTCGGTGGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAATGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAg                                                                                                                                              <  1:1967839/289‑1 (MQ=255)
                                                                                                                                        gCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AAATGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACgaa                                                                                                                                        >  1:99059/1‑287 (MQ=255)
                                                                                                                                                  gtgCTTTACCACTGAAAAATCGTCAGGTTTTCCGTCAACTCTTCCATATTGGGGGGGGGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGGAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTGCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCTGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACggg                                                                                                                               <  2:1336961/286‑1 (MQ=255)
                                                                                                                                                          ccACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATAcc                                                                                                                      <  1:1450199/289‑1 (MQ=255)
                                                                                                                                                           cACGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATAccc                                                                                                                     >  1:120497/1‑289 (MQ=255)
                                                                                                                                                             cGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGa                                                                                                                                                                                             >  2:1210014/1‑215 (MQ=255)
                                                                                                                                                             cGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAgggg                                                                                                                                                                                        <  1:32813/220‑1 (MQ=255)
                                                                                                                                                             cGGAAAAATCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCAGTAAACGCAGCGGGTTAGAGCAAACTGAAGGGGTAACCAAAGCCGAGGTTAATTAATAGCCACTGTAAAAAGTAGAACGCAGCCCAAGGGCCAAATACCCg                                                                                                                    >  2:1811980/1‑288 (MQ=255)
                                                                                                                                                                aaaaaTCGTCAGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCt                                                                                                                 >  1:1410490/1‑288 (MQ=255)
                                                                                                                                                                         aaGGATTTCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAAc                                                                                                        <  1:1858452/287‑1 (MQ=255)
                                                                                                                                                                              tttCGGTCGACTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCCATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACACGGCTACGGTAAACAAgcga                                                                                                  >  2:1152933/1‑286 (MQ=255)
                                                                                                                                                                                   gtcgactctTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGAAATGTTCGCCATAGCAAAACCAAAATAGCCGTAAACGAAGCAGTGTAGAGCAAACAGAAGGGGTAACCTAAGCCGAGAGTAATTAATAGCTACTGTAAAAAGTAGAAAGCAGTCCACGGGCTAAATACGCGGCAACGGGTAACCAgacaatctt                                                                                             >  2:1253117/6‑281 (MQ=255)
                                                                                                                                                                                          ctTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGt                                                                                      <  2:1309704/289‑1 (MQ=255)
                                                                                                                                                                                           ttCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGtt                                                                                     >  2:1370868/1‑289 (MQ=255)
                                                                                                                                                                                                     gtggAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCAc                                                                                                                                  <  1:59585/234‑1 (MQ=255)
                                                                                                                                                                                                     gtggAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCatat                                                                           >  2:1928324/1‑289 (MQ=255)
                                                                                                                                                                                                     gtggAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCata                                                                            >  2:1500296/1‑288 (MQ=255)
                                                                                                                                                                                                     gtggAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGCAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCGACGGGTAACCAGCGAATCTTTGAGGGGTAAATTAatat                                                                           >  2:699014/1‑289 (MQ=255)
                                                                                                                                                                                                        gAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTaaa                                                                                                                                                    >  2:897120/1‑213 (MQ=255)
                                                                                                                                                                                                        gAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGcc                                                                        >  2:66297/1‑289 (MQ=255)
                                                                                                                                                                                                          gTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAACAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCACCGGTGGAGAGCAAACTGCAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTACAACGCAGTCCACGGGCTAAATACCCGGCCACGGGGAACAAGCGACTCTTTGAGGGTTAAATTCatatcgcat                                                                      >  2:1973892/1‑284 (MQ=255)
                                                                                                                                                                                                           tGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGa                                                                                                                                                                                             >  1:1035946/1‑169 (MQ=255)
                                                                                                                                                                                                           tGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGa                                                                                                                                                                                             <  2:1035946/169‑1 (MQ=255)
                                                                                                                                                                                                              aaTGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATc                                                                  <  2:383752/289‑1 (MQ=255)
                                                                                                                                                                                                                     gCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAGCTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACg                                                                                                                                          >  2:824482/1‑210 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGGCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCAATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAAATGAAGTGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  1:1253117/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  1:1213060/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  2:315783/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  1:400257/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  1:1238251/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGcc                                                      <  2:655990/289‑1 (MQ=255)
                                                                                                                                                                                                                            aTTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCAt                                                    >  1:1771479/1‑289 (MQ=255)
                                                                                                                                                                                                                            aTTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCAt                                                    >  2:510720/1‑289 (MQ=255)
                                                                                                                                                                                                                              tGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCAtgt                                                  >  1:690116/1‑289 (MQ=255)
                                                                                                                                                                                                                                aaaTTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAgcaaaagcaaaa                                                                                                                                                                                                                              <  2:1293259/115‑1 (MQ=255)
                                                                                                                                                                                                                                 aaTTGGGGGAGCCATAGGCCGGAGCAAAAGGGAAATAACAAGCCGCCA‑CAGGCAAACTGACACCGACCAGAACTTTTTGTACG‑CGAGGGAATGTTCGCCATAGCAAGAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCt                                               <  2:1888073/289‑1 (MQ=255)
                                                                                                                                                                                                                                 aaTTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCt                                               <  1:149017/289‑1 (MQ=255)
                                                                                                                                                                                                                                     aGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAg                                                                                                                                                                                                               <  2:1528378/125‑1 (MQ=255)
                                                                                                                                                                                                                                     aGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAg                                                                                                                                                                                                               >  1:1528378/1‑125 (MQ=255)
                                                                                                                                                                                                                                     aGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTAc                                            >  1:951338/1‑288 (MQ=255)
                                                                                                                                                                                                                                              gTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCa                                  <  2:949425/289‑1 (MQ=255)
                                                                                                                                                                                                                                              gTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCa                                  <  1:66297/289‑1 (MQ=255)
                                                                                                                                                                                                                                              gTAGGCCTGAGCAAAAGGCAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCa                                  <  1:1938436/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCa                                  <  1:510720/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 ggCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCa                                                                                                                                   >  2:1717789/1‑189 (MQ=255)
                                                                                                                                                                                                                                                    cTGAGCAAAAGGGGAATAACCAGCGGCCAGCAGCG‑AACGAGCACCGCCAAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCTGGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGt                             <  2:120497/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     tGAGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCa                           <  1:941706/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       aGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAg                                                                                                                                                              >  2:788049/1‑156 (MQ=255)
                                                                                                                                                                                                                                                       aGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCa                                                                              <  2:554899/236‑1 (MQ=255)
                                                                                                                                                                                                                                                       aGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACACACGCCATGTGCTTACCCTGGCGTCAAGGGTCAAt                         >  1:843485/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       aGCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAAt                         >  1:300930/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        gCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAAt                         <  2:1392513/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        gCAAAAGGGAAATAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGAAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAAt                         <  2:411072/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aaTAACAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAATACCTGCAagag              <  1:1350898/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCAAGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATc                                                                  <  2:1455734/233‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aaGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAATACCTGCAAGAGTGCGTg        <  1:1093077/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aGCCGCCACCAGCG‑AACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGCGACTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGCGATTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAATACCTGCAagag              <  1:1380971/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
CCAGGTTTTGCACGGGAGCAACAAAAAATGTCGCCACACTGAATACCAGACACAGGCTGTCGAAGGTATTCCAGCGCGCTTTTTCATTCTCTTTTTTTCGCCTGATTGCTATTACGCCGAGCGCAAAAATAAATAAGCCGACCAGGTAGCTGTACCACGGAAAAATCGTCAGGATTTCGGTGCTCTCTTCCATATTGGTGGAGTGCAATGCCAGCAATGTATTGAAATTAGGCGCGCCGTAGGCCTGAGCAAAAGGGAAATAACAAGCCGCCACCAGGC‑TACTGACACCGACCAGAACTTTTTGTACG‑CGAGGCAATGTTCGCCATAGCAAAAGCAAAATAGCCGTAAACGCAGCGGTGTAGAGCAAACTGAAGGGGTAACCTAAGCCGAGGTTAATTAATAGGCTCTGTAAAAAGTAGAACGCAGTCCACGGGCTAAATACCCGGCTACGGGTAACAAGGCTTTCTTTGAGGGTTAAATTCATATGCCACTATCGTAACAAACGCCATGTGCTTACCCTGGCGTCAAGGGTCAATACCTGCAAGAGTGCGTGAAGAGT  >  CP042583/715008‑715566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A