Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 752,321 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583752,3210GC99.6% 524.4 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (114/111);  total (115/113)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583752,3220CG100.0% 533.5 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (115/113);  total (115/113)
*CP042583752,3230TA99.1% 536.0 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (114/112);  minor base C (1/1);  total (115/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 228 total aligned reads displayed.

CAGTTCCGGGCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGACTGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTGCTCGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGGCTTACGACTAAAACGCCAATGGAATTAC  >  CP042583/752042‑752601
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
aaGTTCCGGGTGGCCGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACACGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTTGACGTCATa                                                                                                                                                                                                                                                                                 >  1:1377818/2‑289 (MQ=255)
    tCCGGGCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATAGGGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATagag                                                                                                                                                                                                                                                                              <  1:174601/289‑1 (MQ=255)
    tCCGGGCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATag                                                                                                                                                                                                                                                                                <  1:1844780/286‑1 (MQ=255)
    tCCGGGCCGACGCGATAGGCGCGGATCACCGGTAAAGAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATagag                                                                                                                                                                                                                                                                              <  2:881368/288‑1 (MQ=255)
     ccGGGCCGAGGCGATAGGCGAGGATCACCGGGAAATAATCGTTACGGTTGGCAGTGGTGT‑GCAGGCCACGGTCGGAGGCGGTGTGCTGGGCGCTGGTCTGTAAGTCCGGATGCTGCAATTTCGGCAAGTAACGCGCACCAACACTCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGGGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGcc                                                                                                                                                                                                                                                                            <  2:1293676/289‑1 (MQ=255)
     ccGGGCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGcc                                                                                                                                                                                                                                                                            <  1:444950/289‑1 (MQ=255)
       gggCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCt                                                                                                                                                                                                                                                                           >  1:709281/1‑288 (MQ=255)
             aCGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGGCATAGAGCGTGCTaa                                                                                                                                                                                                                                                                      >  1:1054833/1‑287 (MQ=255)
             aCGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGACTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACa                                                                                                                                                                                                                                                                    >  1:1239451/1‑289 (MQ=255)
             aCGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACCCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACa                                                                                                                                                                                                                                                                    >  2:28879/1‑289 (MQ=255)
                   tAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCg                                                                                                                                                                                                                                                               <  1:603605/288‑1 (MQ=255)
                        gcggcacACCGGTAAATAAACCTTACGGTTGGCATCAGGGT‑CAACGCCACGTTCGCGGTCGATTTGCTGGGCGCTGGACTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGAGCACCAACAATCAAACTCTCCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGGCCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGt                                                                                                                                                                                                                                                          <  2:1239451/282‑1 (MQ=255)
                              cACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCa                                                                                                                                                                                                                                                   <  1:578487/289‑1 (MQ=255)
                               aCCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCaa                                                                                                                                                                                                                                                  <  2:391423/289‑1 (MQ=255)
                                 cGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCa                                                                                                                                                                                                                                                        <  1:1740097/281‑1 (MQ=255)
                                  ggTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAatat                                                                                                                                                                                                                                               <  1:84353/289‑1 (MQ=255)
                                   gTAAATAAACCTTACGGTTGGCATCAGGGT‑CCGGGCCACGTTGGCGGGCGGTTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGAAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAatat                                                                                                                                                                                                                                               <  2:569039/288‑1 (MQ=255)
                                    taaataaaCCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATc                                                                                                                                                                                                                                              >  1:730805/1‑288 (MQ=255)
                                     aaagaaaCATTCCGTTTGGCATCAGGGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATcc                                                                                                                                                                                                                                             <  2:1808708/288‑1 (MQ=255)
                                           cccTTACGGTTGCCAGCA‑TGTGCCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAg                                                                                                                                                                                                                                          <  2:471590/284‑1 (MQ=255)
                                                ttataagaggcaggtgt‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGc                                                                                                                                                                                                                                 <  1:802280/276‑1 (MQ=255)
                                                tgtgTTGGCAGCGGTTT‑CCGGGCCACGGTGGGGGGCGATTTGCTGGGAGCTGGTGTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCCCCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGc                                                                                                                                                                                                                                 <  2:102475/286‑1 (MQ=255)
                                                aCGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAg                                                                                                                                                                                                                                  >  1:83147/1‑288 (MQ=255)
                                                     tggactCAGTGT‑GCAGGCCACGTGCGCGGGGTGTTGTCTGGGCGCTGGTCTGGCAGTCCTGATGCTGCAATGTCGTCAAGTACCGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTAcc                                                                                                                                                                                                                            <  2:1216029/284‑1 (MQ=255)
                                                     tGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTAcc                                                                                                                                                                                                                            <  1:162611/289‑1 (MQ=255)
                                                     tGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTAcc                                                                                                                                                                                                                            <  1:1079392/289‑1 (MQ=255)
                                                     tGGCATCAGGGT‑CCCGGCCACGTTCGCGGGGGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTAcc                                                                                                                                                                                                                            <  2:709281/289‑1 (MQ=255)
                                                       ggcatcctgggccAGGCCACGTTCGAGGGCGATTTGATGGGCGCTGGGCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTAcc                                                                                                                                                                                                                            <  2:1683453/277‑1 (MQ=255)
                                                              tgt‑CCAGGCCACGTTCGCGGGCGATTTGCTGTGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCACCAATCAAACTCACCCGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCATGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCCGTGTATCGCCACCACCGAGCACACCCGGTTTCGCCGGCATAGCGCCCGCTAACATACCGGCCCTACGGCCACTGTCCCAGGCAACAAGCTTACCAAACCCtta                                                                                                                                                                                                                   >  2:1253025/1‑287 (MQ=255)
                                                              tgt‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTAACGCCAGCACCGACCAGAACCGGTGTCGACGGCATAGAGCCTGCTAACATACCGGCCGGCACGCCAAAACCCAAGCCAAACAGCTTAACTAACCCTaa                                                                                                                                                                                                                   >  2:43324/1‑289 (MQ=255)
                                                                   cAGGCCACGTTCGCGGTCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAGGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAACCAGCTTACCTAACCCTAAGGCg                                                                                                                                                                                                               <  1:1003975/289‑1 (MQ=255)
                                                                      gCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATc                                                                                                                                                                                                            >  1:769665/1‑289 (MQ=255)
                                                                           gTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATagag                                                                                                                                                                                                                                                                              <  1:296670/218‑1 (MQ=255)
                                                                           gTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATagag                                                                                                                                                                                                                                                                              >  2:296670/1‑218 (MQ=255)
                                                                           gTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCCGGCCAATAACCCAGCCAAAAAGCTTCACTAAACCAAAGCCGAACACCa                                                                                                                                                                                                        >  2:1080139/1‑288 (MQ=255)
                                                                             tCGCGGGCGATTTGCTGGGGCCTGGTCTGTAAGGCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAgcg                                                                                                                                                                                                     <  2:829048/289‑1 (MQ=255)
                                                                             gcgcgGGCGGTTTGCTGGGGGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAgcg                                                                                                                                                                                                     <  2:1378788/288‑1 (MQ=255)
                                                                              cgcgGACGCTTTGCTGGCGGCTGGGCTGTAAGTCCTGATGCCGCAATTTCGGCAAGTAACGCGCACCACCAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAgcgc                                                                                                                                                                                                    <  2:518800/289‑1 (MQ=255)
                                                                                  ggCGATTGTCTGGGGGCTGGTCTGTAAGTCCTGATGCTGCAAGTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACt                                                                                                                                                                                                 <  2:1633092/288‑1 (MQ=255)
                                                                                    cGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGc                                                                                                                                                                                               <  2:337959/288‑1 (MQ=255)
                                                                                             gggCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAc                                                                                                                                                                                     <  1:1665101/289‑1 (MQ=255)
                                                                                              ggCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAc                                                                                                                                                                                     <  2:795474/288‑1 (MQ=255)
                                                                                               gcgcTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGTCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAGCCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  1:1830436/288‑1 (MQ=255)
                                                                                               gcgcTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  2:1738314/288‑1 (MQ=255)
                                                                                               gcgcTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  2:545187/288‑1 (MQ=255)
                                                                                               gcgcTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  1:1858606/288‑1 (MQ=255)
                                                                                                 gcTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCCGGGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAgcgc                                                                                                                                                                                                    >  1:1479339/1‑271 (MQ=255)
                                                                                                               gcTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAAGCAAACTCACCAGACCGATTAAATA‑GGTTAAGTCATACCCGAGGCTCAGATTAGCCAGTTCCAGTGAGAGCTGACTGCTTTCCATGCC‑CGATTGACGCAACGTATCGCCATCATCGACCAGAACCGCTGTCGACGTCATAGAGCCTGCAAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTCAGGCGATCACCAACCCACTTACAACCACCACCAGTGCGAACAGTatgca                                                                                                                                                                   >  2:1617871/2‑285 (MQ=255)
                                                                                                               ccTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGc                                                                                                                                                                                               <  1:1534468/261‑1 (MQ=255)
                                                                                                               ccTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCACCGCACTGCCAACAATCACCAGTGCTAACAATAGGTa                                                                                                                                                                   >  1:1099847/1‑289 (MQ=255)
                                                                                                                        gcAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCt                                                                                                                                                                                                                                                                           >  2:724888/1‑176 (MQ=255)
                                                                                                                        gcAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCt                                                                                                                                                                                                                                                                           <  1:724888/176‑1 (MQ=255)
                                                                                                                         cAATTTCGGCAAGTAACGCGCAACAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGTCGTCAGGACAATATCGCAGCCAAAGAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTCTTCCCa                                                                                                                                                         >  1:561724/1‑289 (MQ=255)
                                                                                                                            tttCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATc                                                                                                                                                       >  1:404187/1‑288 (MQ=255)
                                                                                                                                 gCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAg                                                                                                                                                                                                                                                       >  1:1653324/1‑187 (MQ=255)
                                                                                                                                              aCCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGCAAAAAAATGGaaaaa                                                                                                                                    >  1:1925709/1‑289 (MQ=255)
                                                                                                                                                  acaaTCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGAt                                                                                                                                                                                                             <  1:1698309/212‑1 (MQ=255)
                                                                                                                                                  acaaTCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGAt                                                                                                                                                                                                             >  2:1698309/1‑212 (MQ=255)
                                                                                                                                                   caaTCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGtt                                                                                                                               <  1:645229/289‑1 (MQ=255)
                                                                                                                                                              aCCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCaaa                                                                                                                                                                                                                                     <  2:1163302/176‑1 (MQ=255)
                                                                                                                                                                      gATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGGGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAAGGGAAAAAAAGTTCGGTCCGGCTTCGACCCCg                                                                                                            <  2:1129063/289‑1 (MQ=255)
                                                                                                                                                                        ttAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  2:117744/215‑1 (MQ=255)
                                                                                                                                                                        ttAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    >  1:117744/1‑215 (MQ=255)
                                                                                                                                                                        ttAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGa                                                                                                           >  2:1450709/1‑288 (MQ=255)
                                                                                                                                                                        ttAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGAc                                                                                                          >  2:945683/1‑289 (MQ=255)
                                                                                                                                                                        ttAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGCAATTTTTCCCATCGCGAAAAAAAATGAAAAAAAAGTTCGGTCCGGCTTCGACCCCGAc                                                                                                          >  2:668377/1‑289 (MQ=255)
                                                                                                                                                                                     cgacATACCCGGTGCGCAGCTAAACCAGTGCCAATAAGGGCTGGCTGCTTTCCGTGCG‑GGAATGACGCAGGTGATCCCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTACTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaaa                                                                                              <  2:1925709/286‑1 (MQ=255)
                                                                                                                                                                                           aCCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCAcc                                                                                                                                                                                    <  1:1290547/197‑1 (MQ=255)
                                                                                                                                                                                           aCCCGAGGCTCAGATTATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCAt                                                                                        >  2:1842241/1‑289 (MQ=255)
                                                                                                                                                                                                  gcccAGGTTTTCCCGTGCCAGTGGGAGCTGCCTGCTGTCCAGTCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGGGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGcc                                                                                  <  2:633761/285‑1 (MQ=255)
                                                                                                                                                                                                          tATCCAGTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAg                                                                         <  2:1491146/289‑1 (MQ=255)
                                                                                                                                                                                                               atggccgttgagAGCCGCCAGCTTTCCATGCC‑GGAAGGCCGCAGTGTATCGACAGCACCGGCCAGAACCGGTGTCGACGTCATAGAGCCTGCTACCATACCGGCCGTCAGGACAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCAt                                                                    <  1:47741/278‑1 (MQ=255)
                                                                                                                                                                                                                gTGCCAGTGAGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTTCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATc                                                                   >  1:901461/1‑289 (MQ=255)
                                                                                                                                                                                                                  gccagtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCCACCATCACCAGTGCTAACATTAGGTAATTTTTCCCAACGCGAAAAAAAATGGAAAAAAAGTTAGGTCCGGCCTCGACACCGACCCAGAAAATAAACAGCAAAAAGCCAAAGTTAAgcgaacggg                                                                 >  2:1783095/9‑283 (MQ=255)
                                                                                                                                                                                                                  gccagtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGAAAAAAGCCAAGATTAAACACATCgg                                                                 >  2:1654838/9‑289 (MQ=255)
                                                                                                                                                                                                                  gccagtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCG‑AAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgt                                                                >  1:211991/9‑289 (MQ=255)
                                                                                                                                                                                                                   ccagtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgt                                                                >  1:1398358/8‑289 (MQ=255)
                                                                                                                                                                                                                      gtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACa                                                                                                                                                                          <  1:1993730/176‑1 (MQ=255)
                                                                                                                                                                                                                      gtgagAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACa                                                                                                                                                                          >  2:1993730/5‑180 (MQ=255)
                                                                                                                                                                                                                             ctgcctgcTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCCGAAAATAAACACCATAAAGCCAAGTGTAAGCGAAACGGTGTTAATGCTg                                                      >  2:1608532/1‑289 (MQ=255)
                                                                                                                                                                                                                             ctgcctgcTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTg                                                      >  1:1716785/1‑289 (MQ=255)
                                                                                                                                                                                                                             ctgcctgcTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTg                                                      >  1:1169088/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTgg                                          <  1:1608532/289‑1 (MQ=255)
                                                                                                                                                                                                                                          aTGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGc                                                                                                        >  1:1338271/1‑226 (MQ=255)
                                                                                                                                                                                                                                          aTGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGc                                                                                                        <  2:1338271/226‑1 (MQ=255)
                                                                                                                                                                                                                                          aTGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTATTgg                                          >  2:809225/1‑288 (MQ=255)
                                                                                                                                                                                                                                            gCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCt                                       <  1:43324/289‑1 (MQ=255)
                                                                                                                                                                                                                                                ggAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCtaat                                    <  1:1158547/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     gACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAg                               <  2:1398358/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      aCGCAGTGTATCGCCAGCACTGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGACAAACAGCTTACCTAATCCTAAGGCGATCACCAGCGCACTGCCAACCATCTCCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGATGGGTACGGCTTAGACCCCGATGCAGAAAATAAACAGAATAAAGCCAATATTCAGCGCATCGGTGTTAATGCGGAAATGTTGTTGGCATAATAACCgg                              >  2:90099/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            tgtATCGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAgcgatacg                        >  2:1310677/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                 cGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAAAAGCGATAAGACTaa                   >  2:1522220/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 cGCCAGCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACCCAGAAAATAAACAGCATAAAGACAAGATTAAGCGAACCGGTGTTAATGCTGAAAGGTTGTTTGCCTAATAACAgagaaaagactaa                   >  2:204405/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                      gCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGCGATACGACTAAAACg               >  1:94902/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      gCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGCGATACGACTAAAACg               >  1:627543/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      gCACCGACCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGCGATACGACTAAAACg               >  2:1964940/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            aCCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATc                                                                   <  2:439178/230‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aCCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGCGATACGACTAAAACGCCAATgg        >  1:427630/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aCCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGCGATACGACTAAAACGCCAATgg        >  1:506109/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aCCAGAACCGGTGTCGACGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAAAAGCGATACGCCTAAAACGCCAAggg        >  2:754677/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
CAGTTCCGGGCCGACGCGATAGGCGCGGATCACCGGTAAATAAACCTTACGGTTGGCATCAGTGT‑CCAGGCCACGTTCGCGGGCGATTTGCTGGGCGCTGGTCTGTAAGTCCTGATGCTGCAATTTCGGCAAGTAACGCGCACCAACAATCAAACTCACCAGACCGATTAAATA‑GGTTAAGGCATACCCGAGGCTCAGATTATCCAGTGCCAGACTGAGCTGCCTGCTTTCCATGCC‑GGAATGACGCAGTGTATCGCCAGCACCGACCAGAACCGGTGTGCTCGTCATAGAGCCTGCTAACATACCGGCCGTCAGGCCAATATCCCAGCCAAACAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAATAACAGGCTTACGACTAAAACGCCAATGGAATTAC  >  CP042583/752042‑752601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A