Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,793,637 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,793,637 | 0 | G | C | 99.3%
| 338.7
/ NA
| 148 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (75/72); total (75/73) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,793,638 | 0 | C | G | 97.3%
| 327.2
/ NA
| 148 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (3/1); new base G (72/72); total (75/73) |
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,793,639 | 0 | T | A | 98.0%
| 332.3
/ NA
| 148 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (74/70); minor base C (0/3); total (75/73) |
| Fisher's exact test for biased strand distribution p-value = 1.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 148 total aligned reads displayed.
CCTCACCGCTAACTAAACGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACGCTCTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑ACT‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTGCGCTGGCTGCCAGTTTGAAGGT > CP042583/1793357‑1793918
|||
cataaccgaaaacgaaacgaTT‑GGCGAGGTAACTGAAAAGCGGCGGCGCCGCGGCAATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCAATTTTTTGGCATCCCGTCCTTCCACAGCAGTGCGGGC‑ATTCAGTGGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACg < 2:1720453/279‑1 (MQ=255)
ctcacccgaaactaaACGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACg > 1:1562494/10‑288 (MQ=255)
ccgaaactaaACGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGcaccac < 2:77383/285‑1 (MQ=255)
aaaCGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAg > 2:756233/1‑289 (MQ=255)
aaCGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGTATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAg > 2:1495646/1‑288 (MQ=255)
aCGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgc > 1:455333/1‑289 (MQ=255)
cGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCTTCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgcg < 1:1466605/289‑1 (MQ=255)
ttAGGCG‑CGTAACTGATAACCGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCCCAACACCGACTCACTCACCAATTGTGCTGGCGCGt > 1:100260/1‑289 (MQ=255)
cg‑cgTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCCACCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 2:1924410/288‑1 (MQ=255)
cg‑cgTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 1:756233/288‑1 (MQ=255)
cg‑cgTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 1:1918636/288‑1 (MQ=255)
cg‑cgTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 1:1484866/288‑1 (MQ=255)
cg‑cgTAACTGATAAACAGCAGCGCCGCGGCGATTGCCGTCAGCAGCAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCACCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 1:357022/288‑1 (MQ=255)
cgctgaaattgtAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGAGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGAt < 2:1960994/277‑1 (MQ=255)
cTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGca < 2:439891/289‑1 (MQ=255)
tGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAgg > 2:367411/1‑271 (MQ=255)
tGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAgg < 1:367411/271‑1 (MQ=255)
aTAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGcaca > 1:783609/1‑288 (MQ=255)
cAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAACTAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGCCATCCATTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCTAGCCTGGCGACGACTGGCTGTATCCACCGTCCCATTTGCGGATACTCCCTCAACACCCACTCCCGCACCACCGGTGTCACCCCGTTGATAGGTTGCCCACCtttccg > 2:1550872/1‑284 (MQ=255)
cAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCgg < 1:969729/288‑1 (MQ=255)
cAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGCGCAGgc > 1:1520057/1‑262 (MQ=255)
cgccgcTGCGATTACCGTCAGCAACAGCAGCAGCGCCAGAACAGGCTTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACACCCTCAACACCGACTTACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATc > 1:1373335/1‑288 (MQ=255)
gccgcTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGAt < 1:1756884/286‑1 (MQ=255)
cgcTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGACCAGGATTAATTCGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCtt < 1:1433877/289‑1 (MQ=255)
cTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTaa > 1:1180120/1‑289 (MQ=255)
tGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAg < 2:1221571/289‑1 (MQ=255)
tGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGc < 2:1309299/289‑1 (MQ=255)
cAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCATAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGcccc > 1:1038983/1‑289 (MQ=255)
aCAGGAGCAGCGCCAGAACAGGATTAAAACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGGTAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAgcgc < 2:1109370/289‑1 (MQ=255)
gcCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgcg < 2:1268832/226‑1 (MQ=255)
ttAATGCGGAAAGGAGTCACGGGATATTACTGCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCGACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGt < 2:1581542/289‑1 (MQ=255)
aTACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCAACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTaa > 1:1290801/1‑288 (MQ=255)
gAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATa < 2:1190131/214‑1 (MQ=255)
gAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATa > 1:1190131/1‑214 (MQ=255)
gAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCCCAACACCGACTCACGCACCACTGGTGCACGCGCGTAGCTAGGTTGCACCCCTCGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGTCCGTCAGTGCCGTCAGCCAt > 2:3897/1‑288 (MQ=255)
aaaTAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCgg > 1:555914/1‑266 (MQ=255)
aaaTAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCAtt > 1:1055991/1‑288 (MQ=255)
aaaTAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCAtt > 1:893004/1‑288 (MQ=255)
aaTAAGTCCCGGGCAATTTCTTCGTCCACCCTTTTTTTTTCAGGTAGTCGGCATCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCTTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTg < 2:1441197/288‑1 (MQ=255)
aGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGCCTGTAGCCCCTGTGCCATTTTCGTCTACTCCCTCAACACCCACTCACGCACCACTGGTGCATGCGCGTAGCTAGCTTACACACCTTCACTCTCCCTCAAGGCTTTCCGCCCCAGCGCCGCTACCGGGCCCTGCTCGCCGTCAGCCATCccagc > 2:1046943/1‑288 (MQ=255)
gtaCGGGAAATTACTTCTGCCCCACGTTTTGTTTCAAGTAGTCGGCATGCCCTTTTTTGGCAGCCTGTGCTTTCTAAACAATGCTGGCTATTC‑GTCAGCGCTATGTTTTTGCTTTGAGGGCGGGGAAGACTGGCTTTAACCACGGTGACATTTTCGGGTTCTCCCTCAACACCGACTCACGCACCACTGGTGCGGGTGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCAtt < 2:942245/287‑1 (MQ=255)
cACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCAtt < 1:1594407/288‑1 (MQ=255)
cGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAAc > 1:1967547/1‑289 (MQ=255)
cGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCa > 1:670525/1‑250 (MQ=255)
cGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCa < 2:670525/250‑1 (MQ=255)
cGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTACCCCCCAAGGttt > 2:856882/1‑287 (MQ=255)
ccTTTTTGTTTCAGGTAGTCGGCAGCCCCTTTTTTGGACTCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTGTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAg < 2:1091919/289‑1 (MQ=255)
tttGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGc > 2:795884/1‑250 (MQ=255)
tttGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGc < 1:795884/250‑1 (MQ=255)
tCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGa > 1:1013306/1‑288 (MQ=255)
tCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAc‑c > 1:596599/1‑288 (MQ=255)
tCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCAATAACGCCAGAGGTTTGCTGGGCAGCGCATTTGATCGCCAc‑c > 2:1893161/1‑288 (MQ=255)
ccACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTc > 1:1607825/1‑289 (MQ=255)
tGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAgcgc > 2:272429/1‑193 (MQ=255)
cATCCAGTCCTGCCGCGTGAATGGTGGA‑ATTCCTTTGCGTAAAGGTTTTTGGATCGAGGCTGGTGAAGACTGGCGGGAGCCACTGTGCCATTTGCGCGTCCTGCCTCAGCACCGCCTGCCGGACCACTGGGGCAGGCGCGGGGGTTGGTTGCACACCTTGCGGGTCGCTTAAGGTTGGCAGCCCCAGCGCCGGTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGTCGTTGATCGTCAC‑CGCCGTGTCGCCAccggcca < 2:865954/288‑1 (MQ=255)
tCCAGTACTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCATCTGTGCCATTTGCGGATACTCCCTCAACACCCACTCACGCACCACTGGTGCAGGCGCGTAGATCGGTTGCACACCTTGCCGATCGCTTAAGGTTTGCAGCCCCAGTGCCACCACCGGACCGTAAGTGCCGCAAGCCATCGACGTACTCACGCCTGGAGTTCTCTGGGCACCGCCTACGATCG‑CACACGCCGTTCCGccacctcccattt > 2:1802185/1‑281 (MQ=255)
ccAGTCCTTCCACAGCAATGCGGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGGGGCTGGCGAAGACTGGCTGGAGCCACTGGGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCAccagccagtga < 2:501258/289‑4 (MQ=255)
ccTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCAccagccagtgaca < 1:960991/286‑6 (MQ=255)
ttgccAGAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCAGCGAGGCTGACGAAGACTTGCTGTAGCCACTGGGCCATTTGCGGATACTCCCTCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCaa < 2:455333/286‑1 (MQ=255)
cTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCCATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCAGTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCaa < 1:168892/289‑1 (MQ=255)
tcaaacacAATGCTGGC‑ATTTAGTGCTTGCAAAGTTGTGTAACCGAGGCTGGCGAATACTGGCAGTAGCCGCGCGGCCATTGGCGGTTAATCCCCCAACACCGACGCACGCACCGCTGGGGGAGGGGCGTAGCTAGGTTGCCCACCTTGCGGATTGCGTAGGGTTTACAGCCCCAGCGCCGCTACCCGGCCGCCAGTGCGGTGAGCCATTGCGGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTGTGGTCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACt < 2:1373335/282‑1 (MQ=255)
acaGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGAGACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGAt < 1:1967111/289‑1 (MQ=255)
aggtgggC‑ATTCAGTTCCTGCAGTGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGAc < 2:1928099/284‑1 (MQ=255)
tGCTGGA‑ATTCAGTTGCTGCAATGTTTTTGCGTCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGAcc < 1:929213/289‑1 (MQ=255)
gCTGTC‑ATTCAGTGGTTGCAATGTTTTTGCATGGAGGCTGGCAAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGAcc < 2:1038983/288‑1 (MQ=255)
gC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCt > 1:269544/1‑289 (MQ=255)
aTTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCaa > 2:1799308/1‑270 (MQ=255)
aTTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTa < 1:719165/289‑1 (MQ=255)
cAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTaaa > 1:965870/1‑288 (MQ=255)
aGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAg > 1:1179374/1‑288 (MQ=255)
gTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGcc > 1:547741/1‑289 (MQ=255)
tttGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAGCCAGTGACAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCtttt > 1:713075/1‑289 (MQ=255)
tgtGCATGGCGGCTGGCGACGACTAGCTGTAGCCACGGTGCCATTTGCGGATACTCCCCCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTGGATAGGTTGCCCACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCaa < 2:579742/287‑1 (MQ=255)
ttGCCTCGAGGCTGGCGAAGACTGGCTGTAGCCACGGTGCCATTTGCGGATACTCCCTCAACACCGCCTCACGCACCACTGGTGCAGGCGCGTATATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCaaa < 1:1612846/289‑1 (MQ=255)
tGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAAc < 1:1893161/289‑1 (MQ=255)
tacGAGGCTGGCGAGGACTGGCGGTAGCCACTTGGCCATTTGCGGATACTCCCTCCACGCCGCCTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAAcgcg < 2:965870/287‑1 (MQ=255)
tCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAg < 1:1250610/154‑1 (MQ=255)
gAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGt > 1:171254/1‑289 (MQ=255)
ggCTGGCGGAGCTGGGCTGGAGCCTCTGTGCCATTGGCGGATGCGCCCGCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCGTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTa < 2:1180120/288‑1 (MQ=255)
aCTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCCCAACACCGACTCACGCACCACTGGTCCAGGCCCGTTGATAGGTTTCACACCTTCCCGCCCGCTTAAGGTTCGCAGCACCAGCGCCCCTACCGGCCCGTCCGTGCCGTAAGCCATTGCAGCATTTAAGCCCGTGGTTTGCTCACCCGCGTCTTTGCTCTCCAC‑CGTCGTGTCGCCACCAGCCCG‑‑TGC‑‑ACGCAACTGACTCTGACCGAGCTTAAAGCCAATGGCTTTTTCAAACGCGGGTAACgtcatggccc > 2:344370/1‑280 (MQ=255)
cTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGcgcg < 1:856882/289‑1 (MQ=255)
tggtgtaggCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACGGGTCCGGGCGCGTAGTTAGGTTGAACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCATTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGt < 1:1069786/281‑1 (MQ=255)
gCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAACCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTc > 1:1305891/1‑289 (MQ=255)
gCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATaa > 1:1525207/1‑288 (MQ=255)
cTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGTCGCGTTCGATAAAcctt > 2:1223249/1‑286 (MQ=255)
cTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAActct > 2:158452/1‑289 (MQ=255)
cTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAAc > 1:1694226/1‑286 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCaa < 1:1264749/215‑1 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCaa > 2:1264749/1‑215 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATCGGCGTTTTCAAACGCGGGTAACGCACCCGGGCGTTCGCAAAActct > 2:577961/1‑288 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAActct > 1:639443/1‑288 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAActct > 1:258931/1‑288 (MQ=255)
tgtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTATCAAACGCGGGTAACGCATCGGCGCGTTCGATAAActct > 1:1438811/1‑288 (MQ=255)
tgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGGTCGATAAACTCTgc > 2:297804/1‑288 (MQ=255)
gCCATTTGCGGATACTCCCTCAACACCGGCTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTgccg > 1:1390840/1‑287 (MQ=255)
tttGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTCCGATAAACTCTgccgag > 1:843789/1‑283 (MQ=255)
gCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTGCCGAGGCTGc < 1:297804/289‑1 (MQ=255)
gCGGATACTCCCCAACCACCCACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACGCCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTATCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTGCCGAGGCTGc < 2:1438811/289‑1 (MQ=255)
aTACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTTCCGAGGCTGCCAGt > 1:167162/1‑289 (MQ=255)
tCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑TGA‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTGCCGAGGCTGCCAGTTTGAAGGt > 1:1192541/1‑289 (MQ=255)
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CCTCACCGCTAACTAAACGATTAGGCG‑CGTAACTGATAAACGGCAGCGCCGCTGCGATTGCCGTCAGCAACAGCAGCAGCGCCAGAACAGGATTAATACGGAAATAAGTCACGGGAAATTACTTCGTCCACCCTTTTTGTTTCAGGTAGTCGGCAGCCACTTTTTTGGCATCCAGTCCTTCCACAGCAATGCTGGC‑ATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACGCTCTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCCGTAAGCCATTGCAGCATTAACGCCAGAGGTTTGCTGGGCAGCGGCTTTGATCGTCAC‑CGCCGTGTCGCCACCAGCCAG‑‑ACT‑‑CAGCAACTGATCCTGACCGAGCTTAAAGCCATAGGCTTTTTCAAACGCGGGTAACGCATCGGCGCGTTCGATAAACTCTGCGCTGGCTGCCAGTTTGAAGGT > CP042583/1793357‑1793918
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
