Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,797,513 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,797,5130AT98.2% 511.1 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (100/117);  minor base G (1/3);  total (103/120)
Fisher's exact test for biased strand distribution p-value = 6.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,797,5140GC99.1% 520.2 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (103/118);  minor base A (0/2);  total (103/120)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,797,5150TA99.1% 515.1 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base A (103/117);  total (103/120)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 223 total aligned reads displayed.

GCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAAGCACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACAGTGTGATTG‑GAAGTAGCT‑GTATAGGCGCAAGCGTCATCGGCGGTATTTGTAACAACTCCGGCGGCAGCCTGGTGCAACGTGGCCCGGCGTATACCGAAATGAGCTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGTCCACCGCGT  >  CP042583/1797233‑1797790
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
   ggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Ga                                                                                                                                                                                                                                                                             <  1:648342/289‑1 (MQ=255)
      tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Gatca                                                                                                                                                                                                                                                                          <  2:1751204/289‑4 (MQ=255)
      tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Gatca                                                                                                                                                                                                                                                                          <  1:1229415/289‑4 (MQ=255)
                     ctcactactaGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Gatca                                                                                                                                                                                                                                                                          <  1:1924446/270‑4 (MQ=255)
                      tcactactaGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCat                                                                                                                                                                                                                                                         <  2:507120/286‑2 (MQ=255)
                             taGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGATAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCatcggtcat                                                                                                                                                                                                                                                  <  1:384937/289‑9 (MQ=255)
                               gAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCCGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCCGGCCTAT‑CCGGGCACCACGCCCTATTCGCTGGAAAAAGCCCCCAAACCGCCGGGACGCGAACCCCCCCCAGTGATTG‑GATCATCCT‑GTATAGgctgtctcttaaac                                                                                                                                                                                                                                                 >  2:1924446/1‑276 (MQ=255)
                                  ttGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATcggcg                                                                                                                                                                                                                                             <  2:760529/289‑1 (MQ=255)
                                  ttGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATcggcg                                                                                                                                                                                                                                             <  1:822197/289‑1 (MQ=255)
                                  ttGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATcggcg                                                                                                                                                                                                                                             <  1:851249/289‑1 (MQ=255)
                                  tgggggCGGGTGCTGAAAGCCTGCGTCCCCGCCGACAAAATTATTCTGATGCCGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATcggcg                                                                                                                                                                                                                                             <  2:572161/285‑1 (MQ=255)
                                    gtgGCGGGTGCTGAAAGCCTGCGGCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGCCCGAAGGAGCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCCCCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCCATACCCGGCCCCACGCTCCATTCGCTGGCAAAAACCCTCAAAACGCTCGGACCCGAACCGCACACAGTGATTG‑GGTCATCCT‑GTATAGGCCCATCCGTCACcggcgg                                                                                                                                                                                                                                            >  2:1307319/1‑289 (MQ=255)
                                                        gCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Gatcatcgtgtat                                                                                                                                                                                                                                                                  <  2:335027/247‑12 (MQ=255)
                                                        gCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Gatca                                                                                                                                                                                                                                                                          <  2:1909349/239‑4 (MQ=255)
                                                          gtccccggcagacaaaTTATTCTGAGGCAGGCCCGCAATACCAGCCTGACCGACAGCTCGACGCCAAACGGTAACGATTAGGATCGCGATGTCGTTATCAGCCGACCCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCggcggct                                                                                                                                                                                                                     <  2:1524916/276‑2 (MQ=255)
                                                            cACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCggcggctcg                                                                                                                                                                                                                   <  1:917403/289‑4 (MQ=255)
                                                                           tattCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAGACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc                                                                                                                                                                                                    <  1:163739/289‑1 (MQ=255)
                                                                           tattCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc                                                                                                                                                                                                    <  1:454629/289‑1 (MQ=255)
                                                                            attCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc                                                                                                                                                                                                    >  1:500439/1‑288 (MQ=255)
                                                                                          cgccAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGaa                                                                                                                                                                                     <  1:905827/289‑1 (MQ=255)
                                                                                                     gCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGGATACCGAAATgtcgttat                                                                                                                                                                           >  1:1092848/1‑281 (MQ=255)
                                                                                                      ccTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGaa                                                                                                                                                                                     <  1:284255/277‑1 (MQ=255)
                                                                                                      ccTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTc                                                                                                                                                                         >  1:1013236/1‑289 (MQ=255)
                                                                                                      ccTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGGGCAACGTGGCCCGGCGTATACCGaa                                                                                                                                                                                     >  2:284255/1‑277 (MQ=255)
                                                                                                       cTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATgtcgatctccg                                                                                                                                                                        <  1:547981/289‑11 (MQ=255)
                                                                                                       cTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTc                                                                                                                                                                         >  1:1553179/1‑288 (MQ=255)
                                                                                                        tGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTcgc                                                                                                                                                                       <  1:1190454/289‑1 (MQ=255)
                                                                                                          aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTTCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTcgcgc                                                                                                                                                                     >  1:1465508/1‑289 (MQ=255)
                                                                                                          aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCCACGTGGCCCGGCGAATACCGCAATGTCGTTATTcgcgc                                                                                                                                                                     >  2:1479266/1‑289 (MQ=255)
                                                                                                          aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGc                                                                                                                                                                                               <  1:813776/263‑1 (MQ=255)
                                                                                                          aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGGCGTTATTcgccg                                                                                                                                                                     >  2:1881924/1‑287 (MQ=255)
                                                                                                              aagggtcgaagCCAAACGGTAACGTTTATGATCGCGAGGTCGTTATCATAAGACCCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGta                                                                                                                                                                  <  2:1553179/278‑1 (MQ=255)
                                                                                                                    cgaCGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Ga                                                                                                                                                                                                                                                                             <  2:488508/174‑1 (MQ=255)
                                                                                                                    cgaCGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGAGCGTATAAATGa                                                                                                                                                           >  1:1003546/3‑289 (MQ=255)
                                                                                                                      aCGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAg                                                                                                                                                         >  2:431739/1‑289 (MQ=255)
                                                                                                                           aaaCGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACg                                                                                                                                                                                                        <  2:1399290/237‑1 (MQ=255)
                                                                                                                           aaaCGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACg                                                                                                                                                                                                        >  1:1399290/1‑237 (MQ=255)
                                                                                                                                 tAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTg                                                                                                                                              >  1:1052480/1‑289 (MQ=255)
                                                                                                                                    cGATTATGATCGCGATGTGGTTGACATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACg                                                                                                                                           <  2:1178969/289‑1 (MQ=255)
                                                                                                                                             tCGCGATTTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTCT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGaa                                                                                                                                   <  1:1839706/288‑1 (MQ=255)
                                                                                                                                             tCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGaa                                                                                                                                   >  1:1687992/1‑288 (MQ=255)
                                                                                                                                             tCGCGATGTCGTTATCATACGCACCCTGCGTCGCGACAAGCTGCACGTTCTTGGAAAGGGCGGACAGGTGCTGGCCTAT‑CCGGGCAACACGCTCTATTCGCTAGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGaa                                                                                                                                   <  1:1789825/288‑1 (MQ=255)
                                                                                                                                              cgcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAAcc                                                                                                                                 >  1:191264/1‑289 (MQ=255)
                                                                                                                                               gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGTCG‑CTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCAt                                                                                                                               <  1:1830925/289‑1 (MQ=255)
                                                                                                                                               gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAAGTGACGCTGGTGAACCa                                                                                                                                >  1:857583/1‑289 (MQ=255)
                                                                                                                                               gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCa                                                                                                                                >  1:124828/1‑289 (MQ=255)
                                                                                                                                               gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGAGCAACGTGGccc                                                                                                                                                                                                  >  2:1436290/1‑223 (MQ=255)
                                                                                                                                               gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGAGCAACGTGGccc                                                                                                                                                                                                  <  1:1436290/223‑1 (MQ=255)
                                                                                                                                                   tGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCt                                                                                                                             <  1:1385294/288‑1 (MQ=255)
                                                                                                                                                   tGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCt                                                                                                                             <  2:920218/288‑1 (MQ=255)
                                                                                                                                                       gTTATCATCAGCACCCTGCGTCTCGACAAGCTGCAGGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGa                                                                                                                        <  2:1656505/289‑1 (MQ=255)
                                                                                                                                                       gTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGa                                                                                                                        <  1:431739/289‑1 (MQ=255)
                                                                                                                                                        ttATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGAt                                                                                                                       >  1:1714879/1‑289 (MQ=255)
                                                                                                                                                               caGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTg                                                                                                                >  1:957320/1‑289 (MQ=255)
                                                                                                                                                                  cACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGa                                                                                                                                             <  1:1679992/257‑1 (MQ=255)
                                                                                                                                                                  cACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGa                                                                                                                                             >  2:1679992/1‑257 (MQ=255)
                                                                                                                                                                    cccTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCCCGCTCTATTCGCTGGAAAAAGCCCTCACACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGa                                                                                                           <  1:43538/289‑1 (MQ=255)
                                                                                                                                                                       tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCggcggct                                                                                                                                                                                                                     <  2:1592557/180‑2 (MQ=255)
                                                                                                                                                                       tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGa                                                                                                                                             <  1:1604470/252‑1 (MQ=255)
                                                                                                                                                                       tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTAGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAAc                                                                                                        >  1:974649/1‑289 (MQ=255)
                                                                                                                                                                            ctcGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCgg                                                                                                   >  1:1294267/1‑289 (MQ=255)
                                                                                                                                                                                 cAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCa                                                                                               <  1:1881924/288‑1 (MQ=255)
                                                                                                                                                                                          cGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCTGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGGATAAATGACGACGGCAAAATGACGCTGGTGAACCATCTGGGGATTGATCTGGGGGAAACGCCGGAGCAGATCGTTAGc                                                                                     >  1:332897/1‑289 (MQ=255)
                                                                                                                                                                                              cTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGaa                                                                                                                                                                                     >  1:190636/1‑189 (MQ=255)
                                                                                                                                                                                                       ggCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGgatgatg                                                                        >  1:1175798/1‑289 (MQ=255)
                                                                                                                                                                                                       ggCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGgatgatg                                                                        >  1:1113035/1‑289 (MQ=255)
                                                                                                                                                                                                             cacgTGATGGCCTAG‑CCCGTAACCAAGCGCTAGTGGCTGGAAAACACCCCAAAACCGCTAGGACGCGAAACGAACTCAGTGATTG‑GATATTCCG‑GTTTAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCa                                                                  <  2:1216539/286‑1 (MQ=255)
                                                                                                                                                                                                                 tGCTGGCCTAT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCaa                                                              >  1:1235064/1‑289 (MQ=255)
                                                                                                                                                                                                                  gCTGGCCTAT‑CCGGGCACCACGCGCTATTCGCTGGAAAAAGCCCTCAAACCGCGGGGACGCGAACCGCACTCAGTGAGTG‑G‑ATCATCTGGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACGACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCaa                                                              <  2:1327842/288‑1 (MQ=255)
                                                                                                                                                                                                                          aT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCt                                                                                                                             <  1:319844/217‑1 (MQ=255)
                                                                                                                                                                                                                          aT‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCt                                                                                                                             >  2:319844/1‑217 (MQ=255)
                                                                                                                                                                                                                           t‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc                                                                                                                                                                                                    >  2:910038/1‑145 (MQ=255)
                                                                                                                                                                                                                           t‑CCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGAt                                                    >  1:1179822/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATc                                                                                                                              <  2:157132/210‑1 (MQ=255)
                                                                                                                                                                                                                                 gCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCg                                               >  1:1020926/1‑289 (MQ=255)
                                                                                                                                                                                                                                    ccacGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCa                                            <  1:1592898/289‑1 (MQ=255)
                                                                                                                                                                                                                                      acGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Ga                                                                                                                                                                                                                                                                             >  2:446341/1‑63 (MQ=255)
                                                                                                                                                                                                                                      acGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑Ga                                                                                                                                                                                                                                                                             <  1:446341/63‑1 (MQ=255)
                                                                                                                                                                                                                                          tctattcgcTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATg                                       <  2:1013236/280‑1 (MQ=255)
                                                                                                                                                                                                                                              ttcgcTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGACCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGgtcg                                   >  1:1336010/5‑288 (MQ=255)
                                                                                                                                                                                                                                              ttcgcTGGAAAAAGCCCTACAACCGCTGGGACGCGAACCGCACTCGGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGgtcgt                                  <  2:1092848/285‑1 (MQ=255)
                                                                                                                                                                                                                                                cgcTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCa                                <  2:1689707/287‑1 (MQ=255)
                                                                                                                                                                                                                                                  cTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCACGCGGGATGATGATCGCATCAAAGATTACGACGTGTGGCACGATGGTCGTCAc                               >  2:1833877/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    ggAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATc                                                                                                                                                                                                                                                 >  2:1050564/1‑76 (MQ=255)
                                                                                                                                                                                                                                                     gAAAAAGACCTCAAACGGCTGGGACGAGAACCGCACGATAGGAATGTGTACTCG‑T‑GTAGAGGCGCATCGGTACTCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCACGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGcc                            <  2:1275073/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCGTCAACCGGCGGGGAGCGGAACCGAACTCAGTGATTG‑GATCATCGT‑GTATAGGCGAATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           <  2:1379717/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAGACCGCGGGGACGCGAAACGAACGCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACACCTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACGGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           <  2:1465508/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           >  2:22615/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           >  1:230230/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           <  2:775418/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           <  2:853305/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCa                          <  2:1020926/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaaaGCCCGCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           <  2:638207/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaaaGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCa                          <  1:363086/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          aGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACGACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGAt                      <  2:449230/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              cTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATg                  <  1:1479266/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGcc                                                                                                     >  2:885366/1‑198 (MQ=255)
                                                                                                                                                                                                                                                                      gCTGGGACGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGt           >  1:1499992/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            aCGCGAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGTCCACcg     <  1:1591518/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                               cgAACCGCACTCAGTGATTG‑GATCATCGT‑GTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGccc                           >  1:755676/1‑263 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
GCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAAGCACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTAT‑CCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACAGTGTGATTG‑GAAGTAGCT‑GTATAGGCGCAAGCGTCATCGGCGGTATTTGTAACAACTCCGGCGGCAGCCTGGTGCAACGTGGCCCGGCGTATACCGAAATGAGCTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGTCCACCGCGT  >  CP042583/1797233‑1797790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A