Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,922,695 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,922,6950GC100.0% 499.7 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (110/102);  total (110/102)
*CP0425831,922,6960CG99.5% 494.1 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (109/102);  minor base T (1/0);  total (110/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,922,6970TA100.0% 500.2 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (110/102);  total (110/102)

Only 100 of 212 total aligned reads displayed.

GTAGCCAACAATCGCGCTCGCCGCCACGCTACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGACTCCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGT  >  CP042583/1922416‑1922966
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                              
gtAGCCAACAATCGCGCTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                                                                                                                                                                                                                                                                         <  1:63117/289‑1 (MQ=255)
     aaacaaTCGCGCTCGCCGCACCCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCg                                                                                                                                                                                                                                                                      <  2:1774913/286‑1 (MQ=255)
         aaTCGCGCTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagc                                                                                                                                                                                                                                                                >  1:1346038/1‑289 (MQ=255)
         aaTCGCGCTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATAATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGCTGCCACGGAAGACTTTAACCGACATACAGCCGCAcagt                                                                                                                                                                                                                                                                >  2:1532273/1‑288 (MQ=255)
           tCGCGCTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagcag                                                                                                                                                                                                                                                              <  1:1002141/289‑1 (MQ=255)
             gcgcTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGCTGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGACGACTTTATACGACAACACGCCGCACACCagag                                                                                                                                                                                                                                                            >  2:1856091/1‑289 (MQ=255)
              cgcTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGAATTTATCCGACATCCAGCCGCACCGCacagg                                                                                                                                                                                                                                                           >  2:562513/1‑288 (MQ=255)
                cTCGCCGCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTg                                                                                                                                                                                                                                                          >  2:266677/1‑288 (MQ=255)
                   gccgccACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCg                                                                                                                                                                                                                                                      <  1:574780/289‑1 (MQ=255)
                      gccaccgaaCCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGaa                                                                                                                                                                                                                                                   <  1:562513/281‑1 (MQ=255)
                      gccaccgaaCCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGaa                                                                                                                                                                                                                                                   <  1:350265/281‑1 (MQ=255)
                                  cccAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                                                                                                                                                                                                                                                                         <  1:1253624/255‑1 (MQ=255)
                                  cccAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                                                                                                                                                                                                                                                                         >  2:1253624/1‑255 (MQ=255)
                                        tAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATaa                                                                                                                                                                                                                                  <  1:121624/288‑1 (MQ=255)
                                            cAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACCGCAGCATGCCCGGAATACCCGCATATTCCTAAAGGa‑a                                                                                                                                                                                                                            >  2:841032/1‑289 (MQ=255)
                                            cAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATAACGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGGGCACGGAATACCTGACAAATCATACAGGa‑a                                                                                                                                                                                                                            >  2:1903165/1‑289 (MQ=255)
                                              aaCAGCCCGGTAACGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGt                                                                                                                                                                                                                          <  1:333313/289‑1 (MQ=255)
                                                   cccGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGc                                                                                                                                                                                                                      >  2:544906/1‑288 (MQ=255)
                                                   cccGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTCGCCACGGAAGACTTTATCCGACCTCCAGCCGCACAGCAAGCTGCCCGGACTACCTGCATATTCCTAAAGGA‑AGTAGGc                                                                                                                                                                                                                      >  2:1643258/1‑288 (MQ=255)
                                                        tacaggacgcttgggTACCGGCCGGTTTTTGCGGTGGCAGATCCTTCGCATGCAGACAGATCAGGATCACAAGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGGCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATACAGAAAACGCCGGTTGCCCCACTGTTGCCACGGAAGACTTTATCCGACATCCAGCCGGACAGCAGATTGCCCGGAATTCCTGCATATTCATAAAGGA‑AGTAGGCCCagg                                                                                                                                                                                                                 <  2:1492116/274‑1 (MQ=255)
                                                        tAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCag                                                                                                                                                                                                                  >  2:783310/1‑287 (MQ=255)
                                                                 cTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGTGTTCATCCAGTAAACGACAGTCCCGATGGTCACCAGTGTCATAAAGAAACCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCAAGCCGCACAGCAGAGTCCCCGGAATCCCAGCATACTC‑TAAAGGACAGTAGGCCAaggcagagttta                                                                                                                                                                                                        >  2:604290/1‑279 (MQ=255)
                                                                 cTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagca                                                                                                                                                                                                                                                               <  1:1043781/234‑1 (MQ=255)
                                                                 cTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagca                                                                                                                                                                                                                                                               >  2:1043781/1‑234 (MQ=255)
                                                                                        ggTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACctct                                                                                                                                                                                 <  2:90722/288‑1 (MQ=255)
                                                                                               gTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAAc                                                                                                                                                                                     >  1:823542/1‑277 (MQ=255)
                                                                                                 tCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGAt                                                                                                                                                                          <  1:408461/286‑1 (MQ=255)
                                                                                                    aGCGCATGCAGACCGATGACCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATAAAAATCATATCGACGGCTGGGTTACCTGCCGGGTTCATACAGTAAACGATAGTCGCAATGGTCACCAGTGTCATAAAAAAAACGCGGGTTGCCCCACGGTTGCCACGGAAGACTCTATCCGACATCCAACCGCACAGCAGAGTGCCCGAAATACCTGCATATTCATAAAGGA‑AGCAGGCCCAGGAGGATTTCTCTAGCGCGAAATGTTTACCCTCTATCAGATATGTCg                                                                                                                                                                    >  2:371995/1‑289 (MQ=255)
                                                                                                        cATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCCGTGTCATAAATAAAACGCCGGTTGCCCCACGGTTGCCACGCAACACTTTATCCGACATCCAGCCGACCCGCAGAGTGCCCGGACTACCTGCATCTTCATAAAGGC‑AGTAGGCCCAGGAGGATTTATTGCGCGCGACAAGCTAAACCTCTTTCAGATAATTCggtg                                                                                                                                                                 >  2:1037238/1‑286 (MQ=255)
                                                                                                          tGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggtgacc                                                                                                                                                              >  2:460305/1‑284 (MQ=255)
                                                                                                          tGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggtgacc                                                                                                                                                              >  2:1386780/1‑284 (MQ=255)
                                                                                                          tGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggtgacc                                                                                                                                                              >  1:73507/1‑284 (MQ=255)
                                                                                                          tGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggtgacc                                                                                                                                                              >  2:1290779/1‑284 (MQ=255)
                                                                                                               aCCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggtg                                                                                                                                                                 <  1:78311/281‑3 (MQ=255)
                                                                                                                   aTCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGa                                                                                                                                                     >  1:216743/1‑289 (MQ=255)
                                                                                                                   aTCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGa                                                                                                                                                     >  1:975614/1‑289 (MQ=255)
                                                                                                                   aTCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCCCTTTCAGATAAGTCGGTGACCAGTCGAGGa                                                                                                                                                     >  1:859999/1‑289 (MQ=255)
                                                                                                                    tCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGa                                                                                                                                                     <  1:1290779/288‑1 (MQ=255)
                                                                                                                    gccgactCACAGGACCGTAGAGCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGGAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCGAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGa                                                                                                                                                     <  2:1142726/282‑1 (MQ=255)
                                                                                                                       gCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCa                                                                                                                                                                                                                                           >  2:343066/1‑200 (MQ=255)
                                                                                                                             caGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATa                                                                                                                                                                         <  2:38400/259‑1 (MQ=255)
                                                                                                                             caGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACg                                                                                                                                           <  1:93503/289‑1 (MQ=255)
                                                                                                                             caGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCAAGGAGGATTTATCTAGCGCGAAATGCGTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACg                                                                                                                                           >  1:857293/1‑289 (MQ=255)
                                                                                                                              aGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagcag                                                                                                                                                                                                                                                              <  2:592831/174‑1 (MQ=255)
                                                                                                                              aGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagcag                                                                                                                                                                                                                                                              >  1:592831/1‑174 (MQ=255)
                                                                                                                                  ccGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACgcagca                                                                                                                                      >  1:1520338/1‑289 (MQ=255)
                                                                                                                                  ccGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGACGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGTTAAGTCGGTGACCATTGGAGGATGCCGTAACgcagca                                                                                                                                      >  2:1991875/1‑289 (MQ=255)
                                                                                                                                     tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGcgcg                                                                                                                                                                                                <  1:91509/228‑1 (MQ=255)
                                                                                                                                     tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAAc                                                                                                                                                                                     <  1:1533240/239‑1 (MQ=255)
                                                                                                                                     tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAAc                                                                                                                                                                                     >  2:1533240/1‑239 (MQ=255)
                                                                                                                                     tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGAt                                                                                                                                   >  1:1185389/1‑289 (MQ=255)
                                                                                                                                     tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGAt                                                                                                                                   >  2:1935859/1‑289 (MQ=255)
                                                                                                                                          cAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGCAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCCCGAAATGCTTAACCCCTTTCAGATAAGTCGGTGACCAGTCGAGGACTCCGTAACTCAGTCGAAAAACg                                                                                                                              >  2:139566/1‑289 (MQ=255)
                                                                                                                                             gAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAac                                                                                                                           >  1:67140/1‑289 (MQ=255)
                                                                                                                                                 ccGATAACAATCATACAATTCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACg                                                                                                                        <  1:1903165/288‑1 (MQ=255)
                                                                                                                                                     tAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGa                                                                                                                                                                                               <  2:768659/213‑1 (MQ=255)
                                                                                                                                                        cAATCATACAAATCATATCGACGGTTTGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCTGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTGTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgat                                                                                                                <  1:1991875/289‑1 (MQ=255)
                                                                                                                                                           tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                                                                                                                                                                                                                                                                         >  1:1444376/1‑134 (MQ=255)
                                                                                                                                                           tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                                                                                                                                                                                                                                                                         <  2:1444376/134‑1 (MQ=255)
                                                                                                                                                           tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑Ag                                                                                                                                                                                                                           >  2:1224771/1‑179 (MQ=255)
                                                                                                                                                           tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑Ag                                                                                                                                                                                                                           <  1:1224771/179‑1 (MQ=255)
                                                                                                                                                           tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGCTAAGTCGGTGACTAGTTGAGGATGCCGTAACGCAGCAGATAAACAAACACGTtggggatggc                                                                                                             >  2:1098778/1‑289 (MQ=255)
                                                                                                                                                                  aaTCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATACAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATAc                                                                                                      <  1:1532273/289‑1 (MQ=255)
                                                                                                                                                                     cATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACTGAAGACTTTATCCGACATCCAGCCGCAcagca                                                                                                                                                                                                                                                               >  1:1614253/1‑134 (MQ=255)
                                                                                                                                                                      atatCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACcaca                                                                                                  <  1:1105742/289‑1 (MQ=255)
                                                                                                                                                                       tatCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCCCGGAAGACTTTATCCGACATCCAGCCACACAGCAGAGTGCCCGGAATACCTGCCTATTCATAAAGGA‑TGTAGGCCCAGGAGGATTTATCTAGCGCGCAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGCGGATGCCGTCACGCAGCAGATCCACGCAAACGTTAGCACTGGCGATATACcaca                                                                                                  >  2:1114295/1‑288 (MQ=255)
                                                                                                                                                                       tatCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACcaca                                                                                                  >  1:1729048/1‑288 (MQ=255)
                                                                                                                                                                        atCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCggt                                                                                                                                                                  <  2:1459864/223‑2 (MQ=255)
                                                                                                                                                                        atCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgatggcga                                                                                                           >  1:1457289/1‑278 (MQ=255)
                                                                                                                                                                              ggTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTg                                                                                          <  1:1466012/289‑1 (MQ=255)
                                                                                                                                                                                  gggTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagca                                                                                                                                                                                                                                                               <  1:278873/121‑1 (MQ=255)
                                                                                                                                                                                  gggTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCg                                                                                      <  1:639714/289‑1 (MQ=255)
                                                                                                                                                                                   ggTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCg                                                                                      <  2:1185389/288‑1 (MQ=255)
                                                                                                                                                                                     ttACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGc                                                                                    <  2:684186/288‑1 (MQ=255)
                                                                                                                                                                                       aCCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgt                                                                                 >  2:930360/1‑289 (MQ=255)
                                                                                                                                                                                           gCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgt                                                                             <  1:6895/289‑1 (MQ=255)
                                                                                                                                                                                             cGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgt                                                                             >  1:1834641/1‑287 (MQ=255)
                                                                                                                                                                                                           aaaCGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGAttt                                                              >  1:1160404/1‑288 (MQ=255)
                                                                                                                                                                                                              cGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCtt                                                          <  1:1386780/289‑1 (MQ=255)
                                                                                                                                                                                                                 tAGGCGCGATGGTAACCAAGGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCg                                                        <  2:1729048/288‑1 (MQ=255)
                                                                                                                                                                                                                  aGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCg                                                                                      <  2:655315/257‑1 (MQ=255)
                                                                                                                                                                                                                    tCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTg                                                             >  1:127948/1‑280 (MQ=255)
                                                                                                                                                                                                                     cgcgATTGTCACCGATGTTATAAAGGAAACGCCCGTTGCCCCACGAGTGCCCCGGAAGACGTTTTCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGTGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCg                                                        <  2:859999/284‑1 (MQ=255)
                                                                                                                                                                                                                         aTGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGc                                                >  2:836295/1‑288 (MQ=255)
                                                                                                                                                                                                                            gTCACCAGTGTCATAAAGAAAACGCAGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATACAGCCGCACAGCAGAGTGCCCGGAATACCTGCATAGTCATAAAGGA‑AGTAGGCCCATGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGAGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATAGACCACAGCAGGTTGTTCGGCCGTACGTAATGCATGAAGATTTTCTTCGCCGTCCGcc                                               >  2:823651/1‑285 (MQ=255)
                                                                                                                                                                                                                                     gtCGTAAAGAAAACGCCGGTGGACCCACGGTTGCAAAGGAAGACGTTATCCGACATCCAGCCGCACAGAAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCtt                                   <  2:1580755/289‑1 (MQ=255)
                                                                                                                                                                                                                                     gtCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCtt                                   <  1:1486339/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATg                                                                                                                                                   <  2:1450226/176‑1 (MQ=255)
                                                                                                                                                                                                                                      tCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCttt                                  >  2:167074/1‑289 (MQ=255)
                                                                                                                                                                                                                                        aTAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCttttt                                <  1:84057/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aTAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCtttt                                 >  1:392044/1‑288 (MQ=255)
                                                                                                                                                                                                                                         tAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCtttt                                 >  2:1024648/1‑287 (MQ=255)
                                                                                                                                                                                                                                              aaaaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcga                                                                                                                 <  2:919959/202‑1 (MQ=255)
                                                                                                                                                                                                                                              aaaaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCAGTCAGCTCCTGTTCCGCTTTTTCGTtat                          >  2:1276093/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGc                                                                                    <  2:1693904/229‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAgtcg                     <  1:1024648/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ccACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAAt           <  2:148349/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTg   <  1:1697122/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ccACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCttttt                                >  1:374352/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                       cACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGt  <  1:479638/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                              
GTAGCCAACAATCGCGCTCGCCGCCACGCTACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGA‑AGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAGATAAGTCGGACTCCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGT  >  CP042583/1922416‑1922966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A