Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,926,670 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,926,6700AT99.5% 480.7 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (109/97);  minor base G (0/1);  total (109/99)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,926,6710GC99.5% 475.8 / ‑4.5 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (109/98);  minor base T (0/1);  total (109/99)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01
*CP0425831,926,6720CG99.0% 474.0 / ‑2.1 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (107/97);  minor base A (1/1);  total (109/99)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.77e-01

Only 100 of 208 total aligned reads displayed.

ACGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGAGTCAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTAGCGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGAGGCGCTGAAATATTGCATC  >  CP042583/1926392‑1926950
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                        
aCGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTggg                                                                                                                                                                                                                                                                                 <  2:1932110/289‑1 (MQ=255)
 cGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGc                                                                                                                                                                                                                                                                                >  1:128648/1‑289 (MQ=255)
  gAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCg                                                                                                                                                                                                                                                                               <  1:393363/289‑1 (MQ=255)
         ggACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGa                                                                                                                                                                                                                                                                        <  1:1619826/289‑1 (MQ=255)
            cccGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATcc                                                                                                                                                                                                                                                                     <  1:166382/289‑1 (MQ=255)
              cGCATTCACGCCGATATTCCGCTAGGTCCCCGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCa                                                                                                                                                                                                                                                                   <  2:384710/289‑1 (MQ=255)
              cGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCa                                                                                                                                                                                                                                                                   <  1:828758/289‑1 (MQ=255)
                         cGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGa                                                                                                                                                                                                                                                        >  1:1886898/1‑289 (MQ=255)
                                   cTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcggcggcg                                                                                                                                                                                                                                              >  1:810001/1‑289 (MQ=255)
                                   cTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcggcggcg                                                                                                                                                                                                                                              >  1:1548157/1‑289 (MQ=255)
                                   cTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcggcggcg                                                                                                                                                                                                                                              >  2:1493043/1‑289 (MQ=255)
                                      cGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCACATCGCCCAGGGATGCGGCGGCGgtg                                                                                                                                                                                                                                           >  1:1944543/1‑289 (MQ=255)
                                        tCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑tt                                                                                                                                                                                                                                        >  1:1061519/1‑289 (MQ=255)
                                                        ctcGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGTTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcggcggcg                                                                                                                                                                                                                                              >  2:226509/1‑268 (MQ=255)
                                                        ctcGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGAGGCGGCGGCGGTG‑TTTGTGCCGTCAGTGGtt                                                                                                                                                                                                                        >  1:1895392/1‑289 (MQ=255)
                                                             cAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACa                                                                                                                                                                                                                    <  1:1493043/288‑1 (MQ=255)
                                                                cGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGc                                                                                                                                                                                                                                                                                <  2:925598/226‑1 (MQ=255)
                                                                cGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGc                                                                                                                                                                                                                                                                                >  1:925598/1‑226 (MQ=255)
                                                                cGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGc                                                                                                                                                                                                                 >  2:608025/1‑288 (MQ=255)
                                                                cGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGCGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGCGACCCTACGCCCGTCACAGGCCGGGCAAACCATTGCAAACCTGTTTGCCATCGGTTCGGC‑TCTGGGCGGATTTCATCCCATTCCCCAGGGATTCGGCCGCCGTT‑GTTGTCCCGTCCGCGCCTTACCTGc                                                                                                                                                                                                                 >  2:1034130/1‑288 (MQ=255)
                                                                       ttCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCa                                                                                                                                                                                                           <  1:565422/287‑1 (MQ=255)
                                                                          tttAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGa                                                                                                                                                                                                      <  1:1976582/289‑1 (MQ=255)
                                                                           ttAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑GTTGTGCCGTCGGTGCTTTACATGCCGCCCAACCGaa                                                                                                                                                                                                     >  2:188977/1‑288 (MQ=255)
                                                                               tGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCa                                                                                                                                                                                                                                                                   <  2:761281/224‑1 (MQ=255)
                                                                                 gCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGt                                                                                                                                                                                                                                <  1:1535787/256‑1 (MQ=255)
                                                                                 gCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGt                                                                                                                                                                                                                                >  2:1535787/1‑256 (MQ=255)
                                                                                         gTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAAACGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTATGCTCCGCAACCGGGGCAGCAGTTCGGTGTAACCACTAGTGAGACGCTACGCCCGGCACGTGCATGGCCACCCAATCATAACCTGTTTGCAATCGATTCTGT‑GCTTGGCGAATTTGACCCCACTACCCAGGGATGCTGC‑ACGGTGTTTTGTGCCGTCAGTGCTTGACATGCCGTGCTACAGCTTGCCGCACGCTCag                                                                                                                                                                                       >  2:1897429/1‑289 (MQ=255)
                                                                                                 aCGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCCGGGATGCGGCGGCGGTG‑GTTGTGCCGTCAGTTCTTTACATGCCTCGCAACAGCTTGCCGCACTCGCACGAGGCca                                                                                                                                                                                >  2:1789564/1‑288 (MQ=255)
                                                                                                   gTAACGGCAGTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGAt                                                                                                                                                                                                     <  2:1271905/265‑1 (MQ=255)
                                                                                                          cATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCTTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACaatgaatg                                                                                                                                                                      >  2:1227703/1‑289 (MQ=255)
                                                                                                          cATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACaatgaatg                                                                                                                                                                      >  1:834759/1‑289 (MQ=255)
                                                                                                            ttCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCAAACGCGCAGGAGGCCAACAATGAATCac                                                                                                                                                                    >  2:142452/1‑289 (MQ=255)
                                                                                                                         tctcGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGaaa                                                                                                                                                       <  2:810001/289‑1 (MQ=255)
                                                                                                                                 ttGATGGGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCAtt                                                                                                                                               <  1:1471412/289‑1 (MQ=255)
                                                                                                                                        gCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCa                                                                                                                                        <  2:1495968/289‑1 (MQ=255)
                                                                                                                                        gCTACAAACCGCCACGCGGGGTGAATGGGATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCa                                                                                                                                        <  2:1552635/289‑1 (MQ=255)
                                                                                                                                         cTACAAACCGCCAGGCGGGGTGAATGGTATAAGGGAGATGTTTTTGGGCCGCAACCGTGGCAGGAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCAAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCa                                                                                                                                        <  2:1076057/288‑1 (MQ=255)
                                                                                                                                         cTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGCATGCCCAACGCTCAGGCGGCCAACAATTAATGACACCCACTTCGAAAACGTCATTaatgtcc                                                                                                                                        >  2:334418/1‑283 (MQ=255)
                                                                                                                                               aCCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATcc                                                                                                                                                                                                                                                                     >  1:1193523/1‑158 (MQ=255)
                                                                                                                                               aCCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGc                                                                                                                                                                                  <  1:1273768/240‑1 (MQ=255)
                                                                                                                                                 cGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCa                                                                                                                                                                <  2:1026797/256‑1 (MQ=255)
                                                                                                                                                 cGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCa                                                                                                                                                                >  1:1026797/1‑256 (MQ=255)
                                                                                                                                                   ccACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcgg                                                                                                                                                                                                                                                   <  1:1372425/172‑1 (MQ=255)
                                                                                                                                                   ccACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATgcgg                                                                                                                                                                                                                                                   >  2:1372425/1‑172 (MQ=255)
                                                                                                                                                   ccACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGcac                                                                                                                              >  1:1376137/1‑288 (MQ=255)
                                                                                                                                                   aaaagaggggggAAGGGGATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACa                                                                                                                                                                                                        >  1:756032/7‑214 (MQ=255)
                                                                                                                                                    cACGCGGGGGGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGGGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGcacc                                                                                                                             <  2:1991827/288‑1 (MQ=255)
                                                                                                                                                           ggTGAATGGTATAAGGGAGCTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCACCAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCt                                                                                                                      >  1:35388/1‑288 (MQ=255)
                                                                                                                                                                     ataAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCt                                                                                                                                  <  2:202969/266‑1 (MQ=255)
                                                                                                                                                                     ataAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTCCCCGGGGac                                                                                                            >  2:1290917/1‑287 (MQ=255)
                                                                                                                                                                      taAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGGGCACCGTCTGCACCACCGCCTGCCCGGTGAGcc                                                                                                          >  2:1653619/1‑289 (MQ=255)
                                                                                                                                                                       aaGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCg                                                                                                         >  1:6253/1‑289 (MQ=255)
                                                                                                                                                                          ggggagtttgttCCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCggg                                                                                                       <  2:1210720/282‑1 (MQ=255)
                                                                                                                                                                          ggAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCggg                                                                                                       <  1:2880/288‑1 (MQ=255)
                                                                                                                                                                           cggacttttttGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGCCGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCggg                                                                                                       <  1:1494681/282‑1 (MQ=255)
                                                                                                                                                                             gaTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGaa                                                                                                   >  1:790423/1‑289 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAGCCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTCCGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAAt                                                                                                  <  1:1164520/289‑1 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAAcgcg                                                                                                                                                                                          >  2:462039/1‑201 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGaaa                                                                                                                                                       >  1:1486986/1‑236 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGaaa                                                                                                                                                       <  2:1486986/236‑1 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCa                                                                                                                                        >  2:570013/1‑251 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTgga                                                                                                   >  1:527427/1‑286 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGaa                                                                                                   >  2:829115/1‑288 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGaa                                                                                                   >  1:20105/1‑288 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGaa                                                                                                   >  1:476387/1‑288 (MQ=255)
                                                                                                                                                                              aTTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCACCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGaa                                                                                                   >  2:1333247/1‑288 (MQ=255)
                                                                                                                                                                               tttttttGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAAt                                                                                                  <  1:222001/288‑1 (MQ=255)
                                                                                                                                                                                         ccgcAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATc                                                                                        >  1:1904399/1‑288 (MQ=255)
                                                                                                                                                                                                                 gtAACCACTTATGGGACGCTCCCGCCGGCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGa                                                               <  2:527427/289‑1 (MQ=255)
                                                                                                                                                                                                                     ccACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGt                                                                                                                                                                                                                            >  2:142858/1‑128 (MQ=255)
                                                                                                                                                                                                                          gatgaGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGTATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACCATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTTCCCGGTGAGCCGGTTGAATCCCGGTTATCCAGGGACAAACCAAACCGGCCCGAATGTCGAGct                                                      >  1:27896/1‑288 (MQ=255)
                                                                                                                                                                                                                          gatgaGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGTAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGATGAGCCGGGGGAATCCCGGTTTTCCAGGGCCAAAACACGCCGGGCCGGATGGCGAggc                                                      >  2:1251075/1‑287 (MQ=255)
                                                                                                                                                                                                                          gatgaGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCg                                                      >  1:1178983/1‑289 (MQ=255)
                                                                                                                                                                                                                            tgaGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCg                                                      >  1:723178/1‑287 (MQ=255)
                                                                                                                                                                                                                             gagaCGCTACGCCCGTCCCAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCt                                                   <  1:1503505/289‑1 (MQ=255)
                                                                                                                                                                                                                                aCGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACTCCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCg                                                >  2:292676/1‑289 (MQ=255)
                                                                                                                                                                                                                                aCGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCg                                                >  1:1988960/1‑289 (MQ=255)
                                                                                                                                                                                                                                aCGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCg                                                >  1:1250275/1‑289 (MQ=255)
                                                                                                                                                                                                                                  gCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCAAGCGTCTGCGtt                                              >  1:1598258/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGttt                                             >  1:572606/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCAGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCCTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGGGAGCGGCTGCGtgt                                             >  2:651329/1‑287 (MQ=255)
                                                                                                                                                                                                                                     aCGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGa                                           >  1:1425585/1‑289 (MQ=255)
                                                                                                                                                                                                                                          cgtcacaggcaggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGAt                                      >  2:1136309/6‑289 (MQ=255)
                                                                                                                                                                                                                                            tcacaggcaggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATg                                     >  1:1556074/4‑288 (MQ=255)
                                                                                                                                                                                                                                              acaggcaggGCAAACCCTTGAAAACCTGTTTGCACTCGGT‑TCGTGGCTGCGCGGATTTGGTCCCATCGCCCAGGGGTGCGGCGGGGGTC‑TTTGTGCCGTCAGTGCTTTACATGCCGCTAAACAGATTGCCCAACGAGCAGGAGGCCAACAATGAATGACCCCAGCTTTGAAAACTGCATTAAGTGAACCGTCTGCAACACCGACTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGGCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGgcg                                  <  2:128648/288‑1 (MQ=255)
                                                                                                                                                                                                                                                aggcaggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  2:1061519/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 tgcaggACAAACCACTTAAAACCTTGTGGCCATCGGTTCGGT‑GCGTGGCTGATTTTCTCCCATCGCCAAGGGATGCGGCGGCGCTG‑TTTGTGCCGTCAGTGCTTTACATGCCGATCAACAGATTGCCCAACGCGCAGGAGGCCAACACTGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGgcg                                  <  2:27896/285‑1 (MQ=255)
                                                                                                                                                                                                                                                 gggaggGAAAACCATTGAAAACCGGTTGGCCATCGGTTCGGG‑GCTGGGCGGATTTGATCCCATCGCCGAGGGACGGGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  2:6253/285‑1 (MQ=255)
                                                                                                                                                                                                                                                   caggGCAACACATTGAAAACCTGTTGGCCAGCGGTTCGGT‑GGTGGGCGGATTTGGTCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGACTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGgcgc                                 <  2:1548157/285‑1 (MQ=255)
                                                                                                                                                                                                                                                   caggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  1:1290917/286‑1 (MQ=255)
                                                                                                                                                                                                                                                   caggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  1:1136309/286‑1 (MQ=255)
                                                                                                                                                                                                                                                   caggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCAGCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  2:723178/286‑1 (MQ=255)
                                                                                                                                                                                                                                                   caggGCAAACCATTGAAAACCTGTTTGCCATCGGTTCAGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCa                                <  1:651329/286‑1 (MQ=255)
                                                                                                                                                                                                                                                      ggCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACCGATTGCCCACCGGGCAGGAGGCCAACAATGAATGACACCAGCCTCGAAAACTGCAGTAAGTGCACCGTCTGCACAACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAATGCCGGCCGGATGGCTAGCGCATGTGCTTGAAAgtaggacccccgtat                          >  2:1193146/1‑275 (MQ=255)
                                                                                                                                                                                                                                                      ggCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGCATCCCGGTTATCCTGGGCCAAAACAAGCCGGGCCGGGTGGCGAGCGGCTGCGTTTGACAGGTGGCTCACCGTAt                          >  2:367357/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      ggCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTAt                          >  1:88226/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       gCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAACGATGGCGCACTGGATg                         >  1:975318/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            ccATTGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCa                                                                                                                                        <  1:306026/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                tGAAAACCTGTTTGCCATCGGTTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGa                     <  2:1987749/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaCCTGTTTGCCATCGGGTCGGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGAGGCGCTGaa            <  1:1304513/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                        
ACGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGAGTCAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTAGCGT‑GCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTG‑TTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGAGGCGCTGAAATATTGCATC  >  CP042583/1926392‑1926950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A