Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,933,459 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,933,4590AT99.6% 562.8 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (124/112);  total (125/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,933,4600CG99.2% 555.9 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (124/112);  minor base T (1/1);  total (125/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,933,4610TA98.7% 549.7 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (122/111);  minor base C (2/1);  total (125/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 238 total aligned reads displayed.

GGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTACTTTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATCCAGCCATGCTCAC  >  CP042583/1933180‑1933739
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
ggtggtATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAAc                                                                                                                                                                                                                                                                                  <  1:156412/289‑1 (MQ=255)
       tCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGTAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATAACAATAGGACGGGTCATGGCGGGGAGTGTGGTTGTATCCAACATaatag                                                                                                                                                                                                                                                                           >  2:689747/1‑285 (MQ=255)
          aTCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACt                                                                                                                                                                                                                                                                        <  2:72118/289‑1 (MQ=255)
           tCAGTTGCGTCAAACGCGGTCGATCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  1:1326018/289‑1 (MQ=255)
           tCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAAAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  2:250427/289‑1 (MQ=255)
           tCAGTTGCGTCAAACGCGGTCGAGCCAGGTCACGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  2:753085/289‑1 (MQ=255)
           tCAGTGGCGTCAAACGCTGTCGAGACAGTTCCCGGAGATCCTTCTGGCTTAGCTCATGACCGGAAAGCTCCACCAGCCGGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACTCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAAGATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  2:1460329/289‑1 (MQ=255)
            cAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTcc                                                                                                                                                                                                                                                                      >  2:1047695/1‑289 (MQ=255)
                tGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCa                                                                                                                                                                                                                                                                     <  1:1073942/286‑1 (MQ=255)
                tGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTc                                                                                                                                                                                                                                                                  <  1:1047695/289‑1 (MQ=255)
                   gTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCtt                                                                                                                                                                                                                                                                <  1:1974528/288‑1 (MQ=255)
                            ggTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGa                                                                                                                                                                                                                                                      <  1:945661/289‑1 (MQ=255)
                                 aGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAg                                                                                                                                                                                                                                                 >  2:299049/1‑289 (MQ=255)
                                       ttCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGt                                                                                                                                                                                                                                           <  2:1778330/289‑1 (MQ=255)
                                        tCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCg                                                                                                                                                                                                                                            <  2:126260/287‑1 (MQ=255)
                                        tCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCg                                                                                                                                                                                                                                            <  1:1885850/287‑1 (MQ=255)
                                        tCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCg                                                                                                                                                                                                                                            <  2:419596/287‑1 (MQ=255)
                                        tCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCg                                                                                                                                                                                                                                            <  1:752024/287‑1 (MQ=255)
                                           cGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCt                                                                                                                                                                                                                                       <  1:297683/289‑1 (MQ=255)
                                                 tCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  2:730931/251‑1 (MQ=255)
                                                    aTCTTGCTTAACGCAGGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTCGTGATCAATGCTAAGCAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATGCTGTACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAg                                                                                                                                                                                                                              <  1:531154/289‑1 (MQ=255)
                                                          cTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTc                                                                                                                                                                                                                                                                       <  2:520795/242‑1 (MQ=255)
                                                          cTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGGAAAA‑t                                                                                                                                                                                                                       >  1:1156612/1‑289 (MQ=255)
                                                            tAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑Ttg                                                                                                                                                                                                                     >  2:586114/1‑289 (MQ=255)
                                                            tAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTCTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑Ttg                                                                                                                                                                                                                     >  1:336837/1‑289 (MQ=255)
                                                               cGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCt                                                                                                                                                                                                                                       >  1:636404/1‑269 (MQ=255)
                                                                    gACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGTCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAgcgc                                                                                                                                                                                                             >  1:1393543/1‑289 (MQ=255)
                                                                         gAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCaa                                                                                                                                                                                                        >  1:21306/1‑289 (MQ=255)
                                                                              cTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATccc                                                                                                                                                                                                   >  1:1921369/1‑289 (MQ=255)
                                                                              cTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGCCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATccc                                                                                                                                                                                                   >  1:240165/1‑289 (MQ=255)
                                                                               tCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATAAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATccc                                                                                                                                                                                                   <  2:1644475/288‑1 (MQ=255)
                                                                                 caccaGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCtt                                                                                                                                                                                                                                                                <  1:1776732/226‑1 (MQ=255)
                                                                                 caccaGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGGGTAAAA‑TTGTGAAGCGCATCAAATCCCGc                                                                                                                                                                                                 >  2:1137135/1‑288 (MQ=255)
                                                                                   ccaacgtgagccACAAACAAAAATTGTCCTGGGAATCAAGGCTAAGAACACGCTTACGCCTGAGTTCATTAAGCAGAAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGctcc                                                                                                                                                                                              <  2:1367007/279‑1 (MQ=255)
                                                                                      gCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCg                                                                                                                                                                                           >  2:1182613/1‑289 (MQ=255)
                                                                                       ccTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGt                                                                                                                                                                                                                                           >  2:1724472/1‑241 (MQ=255)
                                                                                              cacaAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGGGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCcagcag                                                                                                                                                                                   <  2:1613890/289‑1 (MQ=255)
                                                                                               acaaacaaAAATTTTCCTGGGGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGG‑CAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGAc                                                                                                                                                                                 <  2:665481/289‑1 (MQ=255)
                                                                                                caaacaaaAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGCATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCAGCTACTCGGCCAGCCGa                                                                                                                                                                                  >  2:1117329/1‑288 (MQ=255)
                                                                                                caaacaaaAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGAc                                                                                                                                                                                 <  2:1341049/289‑1 (MQ=255)
                                                                                                             tCCCGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTTCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCTCTCCTCCTCCATCAGACTGGAAAAATTAc                                                                                                                                                                     >  2:1053628/1‑288 (MQ=255)
                                                                                                                            cTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATAATGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCAAAAATTTGCGaa                                                                                                                                                      >  1:99948/1‑288 (MQ=255)
                                                                                                                                   aaCGCTGACGCCTGAGTTCATGAAGCAGCAAAGAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCa                                                                                                                                              <  2:1158686/289‑1 (MQ=255)
                                                                                                                                     cGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACg                                                                                                                                            >  1:1689273/1‑289 (MQ=255)
                                                                                                                                     cGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACg                                                                                                                                            >  2:183998/1‑289 (MQ=255)
                                                                                                                                                  gTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTa                                                                                                                                <  1:724689/288‑1 (MQ=255)
                                                                                                                                                               caAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAgg                                                                                                                  >  1:416635/1‑289 (MQ=255)
                                                                                                                                                                       ccGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACa                                                                                                           <  2:1689273/288‑1 (MQ=255)
                                                                                                                                                                           gCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAAAATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCACGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGAACTGATTTTTTCTTATTGAGTACACCAGGTTGGACAAAttt                                                                                                      >  1:1839172/1‑289 (MQ=255)
                                                                                                                                                                                      ttCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTAtt                                                                                                                              <  2:349185/254‑1 (MQ=255)
                                                                                                                                                                                      ttCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTAtt                                                                                                                              >  1:349185/1‑254 (MQ=255)
                                                                                                                                                                                      ttCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAAGTTGTGAATCAGCGCCCGGATTTTTGCTTATTGCGTACAACAGGTTGGACAAATTTTGCGGGAgggg                                                                                           >  2:1292648/1‑289 (MQ=255)
                                                                                                                                                                                       tCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAggggg                                                                                          >  2:671205/1‑289 (MQ=255)
                                                                                                                                                                                       tCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAATACAACAGGTTGGCCAACTTTTGCCGGCagggg                                                                                          >  2:1917767/1‑289 (MQ=255)
                                                                                                                                                                                        cccAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGa                                                                                         >  1:124630/1‑289 (MQ=255)
                                                                                                                                                                                         ccAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGTCAAATTTTGCCGGAGGGGGaa                                                                                        <  2:1800718/289‑1 (MQ=255)
                                                                                                                                                                                               tgtCAATGAGCGACGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGCTTCCAACATACTGGACTCAAGTCTTAGTTACTGGACTCAGTCTCGTTGCTCAGCGGGAGTAAAA‑TTGTGAACAGAATCAATTCCCGATCCCCGTCCAGCAGTCTGGAGAAATTACGCACGAAGTTGAGAATCAGAGCAAGGATTTTTTCTTACGTAGTACAACAGATTAGACAAATTTTGCCGGCAGGGGTATGTGcc                                                                                  >  2:221355/1‑289 (MQ=255)
                                                                                                                                                                                                gtCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCg                                                                                 <  2:416635/289‑1 (MQ=255)
                                                                                                                                                                                                 tCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGATTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCgg                                                                                >  2:987159/1‑289 (MQ=255)
                                                                                                                                                                                                 tCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGG‑GTAAAACTGGTGAACCGCTCCAATTCCCCCCCCTCGCCCGCCAGCCTGGAGAACTAACGCACAAATTTGTGATCCAGCGCCCGGATTTTTCCTTATTATGAACAAAAGTTTGCACAAATTTTGCCGGAggggaattgcgcggt                                                                                >  2:1129646/1‑278 (MQ=255)
                                                                                                                                                                                                           tcgCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCgg                                                                                <  2:1294933/279‑1 (MQ=255)
                                                                                                                                                                                                           tcgCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCgg                                                                                >  1:1294933/1‑279 (MQ=255)
                                                                                                                                                                                                                  aCTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGc                                                                  <  1:1053628/286‑1 (MQ=255)
                                                                                                                                                                                                                         gggCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTa                                                                                                                                <  1:1640217/217‑1 (MQ=255)
                                                                                                                                                                                                                         gggCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTgg                                                         <  2:1722806/288‑1 (MQ=255)
                                                                                                                                                                                                                         gggCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGAAATGTGCCGGTGCAGTAAACCGGCACAGAGTgg                                                         <  2:263037/288‑1 (MQ=255)
                                                                                                                                                                                                                             cAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGaa                                                    <  1:1900891/289‑1 (MQ=255)
                                                                                                                                                                                                                             aaaTGCGGTCAATCAAATTTAGAAAAATAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGaa                                                    <  2:2000672/288‑1 (MQ=255)
                                                                                                                                                                                                                              aaTGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTTCCGGTGCAGTAAACCGGCCAAGAGTGGCGGAAt                                                   >  2:489867/1‑289 (MQ=255)
                                                                                                                                                                                                                                tGCGGGCATTCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATca                                                 <  1:1829756/289‑1 (MQ=255)
                                                                                                                                                                                                                                tGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTa                                                                                                                                >  2:157693/1‑210 (MQ=255)
                                                                                                                                                                                                                                tGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATca                                                 >  1:148095/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gCGGGCAATCAAATGGAGAATATCAATAGCCCGTCTAAGGGCGGGAACTTTGCTTGATTCCAACCTACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TGGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATcag                                                <  2:592988/289‑1 (MQ=255)
                                                                                                                                                                                                                                   gggCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATcaga                                               <  1:1137135/288‑1 (MQ=255)
                                                                                                                                                                                                                                   gggCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATcaga                                               <  1:586114/288‑1 (MQ=255)
                                                                                                                                                                                                                                     gCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGaa                                                                                        >  1:309250/1‑245 (MQ=255)
                                                                                                                                                                                                                                     gCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATcagacag                                            >  1:655291/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATcagacag                                            >  1:1519355/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaTCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAG‑AATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATa                                         <  1:1018504/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGCTTACAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATa                                         <  2:569505/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCAAATTGAGAATATCAATAGCCCGGGTCAGTGCGGGAACTTTGCTTGATTCCAACATACAGGACTCCAGTCGTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGAACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATa                                         <  1:776740/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 agaATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCa                                                                                                                                              <  2:839377/179‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaTATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGAc                              <  1:1182613/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAGCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAgg                                                                                                                                                                                                                                   <  2:150734/85‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTaaa                                                                       >  2:1274968/1‑238 (MQ=255)
                                                                                                                                                                                                                                                             gCCCGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTaaa                                                                       <  1:1274968/238‑1 (MQ=255)
                                                                                                                                                                                                                                                                cGTGTCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCaa                 >  1:465885/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 gtgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCgg                                                                                >  1:597331/1‑225 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCg                                                                                 <  1:179572/223‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTgg                                                         <  1:257471/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGCCAGATAAGGTCATGGACTCAACAACCTCAAt                >  1:1701399/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAAt                >  2:649786/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAAt                >  1:1342349/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAAt                >  1:1752096/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGAACAAATTTGTGAATCAGCGCACGGAtt                                                                                                                                        <  1:89882/168‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tgtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGAACAAATTTGTGAATCAGCGCACGGAtt                                                                                                                                        >  2:89882/1‑168 (MQ=255)
                                                                                                                                                                                                                                                                   gtCAGGGCGGGAACTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATcc              >  1:801552/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gtCAGGGCGGGAACTTTGCTTGATTCCAACATAATGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATc               <  1:689747/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aCTTTGCTTGATTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATCCAGCCATGCTCAc  <  2:1913948/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aCTTTGCTTGATTACAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATCCAGCCATGCTCAc  <  1:1915421/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
GGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAGGGCGGGAACTTTGCTACTTTCCAACATACTGGACTCCAGTCTTAGATACTGGAATCAGTCTCGTTGCTCAGGGGGAGTAAAA‑TTGTGAAGCGCATCAAATCCCGCTCCTCGTCCAGCAGACTGGAGAAATTACGCACAAATTTGTGAATCAGCGCACGGATTTTTTCTTATTGAGTACAACAGGTTGGACAAATTTTGCCGGAGGGGGAATGTGCCGGTGCAGTAAACCGGCACAGAGTGGCGGAATCAGACAGATAAGGTCATGGACTCAACAACCTCAATCCAGCCATGCTCAC  >  CP042583/1933180‑1933739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A