Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
562,222 |
6 bp→CGACGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 562,222 | 0 | G | C | 98.6%
| 653.9
/ NA
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base C (138/142); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 6.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 562,223 | 0 | C | G | 98.9%
| 659.0
/ NA
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base G (137/142); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 6.18e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 562,224 | 0 | T | A | 99.3%
| 662.3
/ NA
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base A (138/142); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 562,225 | 0 | G | C | 98.9%
| 658.4
/ ‑6.4
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base C (136/142); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 562,226 | 0 | C | G | 98.9%
| 651.5
/ ‑6.2
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base G (137/142); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 562,227 | 0 | T | A | 99.7%
| 671.5
/ NA
| 284 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (138/144); minor base C (1/0); total (139/145) |
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 284 total aligned reads displayed.
CGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCGCTCAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑GCTGC‑TCATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATGCTCTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCACTTTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCA > CP042583/561952‑562496
|||||||
cGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCa > 1:537077/1‑289 (MQ=255)
ggCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCaaa > 1:1638847/1‑289 (MQ=255)
gccgTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTa > 1:576028/1‑289 (MQ=255)
gccgTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATAACATTTGCCGACAGCGGCGGCTGGATATATCGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAACAACGGAGCTa > 2:2257805/1‑289 (MQ=255)
cggaaggCCGTTGTTGGTGGTGGGAACCCGTGGCGGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACAAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCGGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATGCCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAACGACGC‑‑CATCGGCAGATCAAAGAGCGGTGCTAAc < 2:2197309/283‑1 (MQ=255)
gTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACg < 2:198820/289‑1 (MQ=255)
aaTGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCCGTAAGCTCAATACCATTTGCCGACAGCGTCGGCTGGATATAGGGCCCACGGCTGAA‑CGACG‑ACACCGGCAGATCACAGACAGGTGCGCACgg > 2:82057/1‑288 (MQ=255)
ccGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACg < 1:920667/287‑1 (MQ=255)
ttgttgGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCCGATCAAAGAACGGTGCCAAAGGACGCAGaa > 1:284124/1‑289 (MQ=255)
gcgcAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATTGCCCACGGCTGCA‑CGACG‑ACATCGGCAGCTCAAAGAACCGTGCCAACGGCCGCAGAAtcgacgccaac > 2:2490165/1‑279 (MQ=255)
cAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGGGCCAACGGACGCAGACACGAGTCCAGCGGGACa > 2:2397001/1‑289 (MQ=255)
ggCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACt > 2:2055743/1‑288 (MQ=255)
ggCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTc > 1:1547334/1‑289 (MQ=255)
cgcacgcaTTCGCGGCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAg < 2:576028/288‑1 (MQ=255)
gcacgcaTTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑a < 1:383752/288‑1 (MQ=255)
gaaccctttCGCGCACTCTGGACATGGTGCGATGGACCAATGGGTTTACCAAACCAAGCATCGTTGGAGATAGTCAGCAGAGAATCGGTATCCGGGCGGAAGTTATCGCGCACTTGGTCGCCGGGAATGATCTCGTAGCAAATAGCCGCGGTAAGCTCAATCCCATTTGCCGACGGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCGAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑a < 2:1771487/281‑1 (MQ=255)
cgcaTTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGCTCAAAGAACGGTGCTAACGGACGCAGAAACGACTCCACCGGGACAAACTCGCCCAACCGCACCAG‑ATGGt > 2:2186793/1‑289 (MQ=255)
cgcaTTCGCGCCATATGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt < 2:686725/289‑1 (MQ=255)
gcaTTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGtt < 1:2490165/289‑1 (MQ=255)
tCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTg < 2:864310/289‑1 (MQ=255)
gcCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGGGATAGTCAGCAGATAGTCGGTATCCGGGCGGGAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTta < 2:1526186/288‑1 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGGTATATGGCCCACGGCTGAA‑CGACG‑ACAACGGCAGATCAAAGAACGGTGCTAACGGACGCAAAATCAGCCCCCGCCGGACAAAGTCGCCAAAAGGCCACAGAAGGGTTTTTGTtatgcggatggtgggt > 2:1958167/1‑276 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGaa < 2:1149129/204‑1 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTg < 2:1471575/209‑1 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAAc > 2:1327487/1‑214 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCa < 1:1129668/221‑1 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑a > 1:640171/1‑262 (MQ=255)
ttGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt > 1:1247258/1‑266 (MQ=255)
ggcccagggccAAAAGAGTGACCAAACCCGGCGTCGTTGGAGATAGTCAGCAGATAGTCGGGATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgatt < 2:2078266/280‑6 (MQ=255)
gCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattc > 2:2636267/1‑283 (MQ=255)
cATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCGCTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcg < 1:495801/288‑8 (MQ=255)
cATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcgt < 1:2318807/289‑9 (MQ=255)
aCCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCt < 2:1122093/288‑1 (MQ=255)
cAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTa < 2:610664/289‑1 (MQ=255)
aTAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGaa < 1:2727239/191‑1 (MQ=255)
tgaaTTTACCAAACCACGCGTCGTTGGGGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACgg < 2:961531/286‑1 (MQ=255)
tttACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGgcg < 1:2186793/287‑1 (MQ=255)
ttACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt < 1:849530/247‑1 (MQ=255)
ttACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgatt > 1:2660192/1‑266 (MQ=255)
ttACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGGTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCa > 1:1852356/1‑288 (MQ=255)
aCCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt > 2:2330312/1‑245 (MQ=255)
aCCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCt > 1:1437882/1‑289 (MQ=255)
acacctcATCGTGGGAGAGAGTCAGCAGATAGGCGGTACCCGGGCGGAAGGTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGATGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGCGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTAcc < 2:2025803/283‑1 (MQ=255)
gTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGtgatg > 1:69858/1‑289 (MQ=255)
tGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGtgatga < 1:245582/288‑1 (MQ=255)
tGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTgatgat < 1:2636267/289‑1 (MQ=255)
ggAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGatgatg < 2:1048419/289‑1 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAg > 1:953213/1‑189 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt < 1:453814/221‑1 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGt > 2:453814/1‑221 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGgcg > 1:1687231/1‑260 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGgcg < 2:1687231/260‑1 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGtgttg > 1:1555367/1‑289 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGtgttg > 1:2667496/1‑289 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGGTATAGCGAACGGCTGATTCGTAGCTGTACGGCGCCACTTTACCCAGCGTGATGATGGtgttg > 2:23767/1‑289 (MQ=255)
aGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCAAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAg > 1:2356985/1‑250 (MQ=255)
tCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTtata < 2:123938/229‑1 (MQ=255)
tCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGt > 2:787192/1‑274 (MQ=255)
tCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTa > 1:468143/1‑289 (MQ=255)
cagATTGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTG‑A‑GCGACGACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgatt < 1:2116112/239‑6 (MQ=255)
cagATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCa < 2:188796/199‑1 (MQ=255)
tAGTGGGTATCCGGTCGGAAGTTCTCGCGCACTTCCTGGCCGAGAATAGTCTCGAGGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACGAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGt < 2:507416/289‑1 (MQ=255)
tAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAATCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTAt < 1:1958167/286‑1 (MQ=255)
gTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGgcg > 1:1895260/1‑248 (MQ=255)
gTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAg > 2:2735063/1‑289 (MQ=255)
cGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAg < 1:1355914/287‑1 (MQ=255)
ggTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCgg < 1:1290286/289‑1 (MQ=255)
cGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGc < 2:1547334/289‑1 (MQ=255)
cGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGc < 1:2344962/289‑1 (MQ=255)
ggCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcg < 2:707660/224‑8 (MQ=255)
ggCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcg > 1:707660/1‑217 (MQ=255)
ggCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCtt > 2:1287521/1‑289 (MQ=255)
ggCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCtt > 1:2133663/1‑289 (MQ=255)
ggCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAAGCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCtt > 1:81634/1‑289 (MQ=255)
gAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTg > 1:323455/1‑289 (MQ=255)
tATCGCGCCCTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTgaga < 2:424390/287‑1 (MQ=255)
tCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATc < 2:1638847/288‑1 (MQ=255)
cGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATccc < 1:1018771/289‑1 (MQ=255)
cGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGtgatga > 1:2033233/1‑231 (MQ=255)
cGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGt < 2:468143/289‑1 (MQ=255)
tcGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAgcgagc < 1:1499060/289‑6 (MQ=255)
tAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcg < 1:993401/183‑8 (MQ=255)
aaGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTct < 2:2563203/289‑2 (MQ=255)
aaGCTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCa < 2:303643/289‑1 (MQ=255)
cTCAATACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGctgattcg > 1:2070956/1‑156 (MQ=255)
cAATACCATTTGCGATCGGCGGCGGCTGGATAGATGCCCCTCGGCTGAA‑CGACG‑ACGTCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGGGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGAGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGAGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACAGTc < 2:929008/289‑1 (MQ=255)
aaTACCATTTGCCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAgcgag > 1:12029/1‑258 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACgg > 1:1066355/9‑164 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGtgatga < 1:1364975/179‑1 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGtgatga > 2:1364975/9‑187 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTc < 1:2567773/225‑1 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCa > 1:1434584/9‑271 (MQ=255)
tttgccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCa < 2:1434584/263‑1 (MQ=255)
gccgacAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGa > 1:888420/6‑289 (MQ=255)
cggcggCTGGATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTCGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGa < 1:2378594/224‑1 (MQ=255)
ggATATATGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGAtt < 2:1555367/289‑1 (MQ=255)
atGGCCCACGGCTGAA‑CGACG‑ACATCGGCAGAGCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTc < 2:2694653/289‑1 (MQ=255)
ggCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAg > 2:894155/1‑180 (MQ=255)
ggCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTTTCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCa > 1:726559/1‑289 (MQ=255)
ggCCCACGGCTGAA‑CGACG‑ACATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATCGACTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCTGATTCGTAGCTGTACGGCCCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAAGCCCGGTTACCAGCCAGCTCTCTTTAGCACGCAACTCCCCGTCCTGTGCTTTGAGGAACGGTTGCTGATTATTTTCCa > 2:2646854/1‑289 (MQ=255)
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CGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGCGCACTTGCTCGCCGAGAATGATCTCGTAGCAAATAGCCGCAGTAAGCTCAATACCATTTGCGCTCAGCGGCGGCTGGATATATGGCCCACGGCTGAA‑GCTGC‑TCATCGGCAGATCAAAGAACGGTGCTAACGGACGCAGAATGCTCTCCAGCGGGACAAACTCGCCAAACGGCACCAG‑ATGGTTTTTGTTATAGCGATCGGCACTTTCGTAGCTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCA > CP042583/561952‑562496
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
