Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 565,022 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583565,0220AT99.4% 807.2 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (168/167);  minor base G (2/0);  total (170/167)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583565,0230CG99.4% 792.5 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (168/166);  minor base T (1/1);  total (170/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583565,0240TA99.7% 794.5 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (169/167);  total (170/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

GCCAGTTGTAAATCGAGGATCACCTGACTCATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCACTTTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TACTGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACTGCCGGACGAGTCAG  >  CP042583/564742‑565303
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
gCCATTTTTAAATCGTGGTTCACCTGACTCATTTTTTTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTaaa                                                                                                                                                                                                                                                                                   <  2:61295/289‑1 (MQ=255)
       gTAAATGGAGGTTCACCTGAGTAATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCGGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCGTCGCTGTGGAAGAAGTTACAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGTCGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATTACCGCTT‑TTGAGTTAAAACCGATa                                                                                                                                                                                                                                                                            <  1:2356419/289‑1 (MQ=255)
       atgagtCGAGGGTAACCTTACTCATTGTTTGTCCTGGTTTTCGCGCTTGGGTTCTGCTGGCAGCGGCGCTTTTCATTTTTGTGCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATa                                                                                                                                                                                                                                                                            <  2:2424797/284‑1 (MQ=255)
            tctacgATCACCTTACCCTTTTTTGTTCCTGGTCTTCGCGCTTGCGTTCTGCTGCCAAGGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCGCAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGt                                                                                                                                                                                                                                                                       <  2:332560/284‑1 (MQ=255)
                  aTCACCTGACTCATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGa                                                                                                                                                                                                                                                                  >  1:1589254/1‑288 (MQ=255)
                      ccTGACTCATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACa                                                                                                                                                                                                                                                               >  2:1846667/1‑287 (MQ=255)
                           cTCATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCAt                                                                                                                                                                                                                                                        <  1:1846667/289‑1 (MQ=255)
                              aTTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCAAAGGGTGACGAACCACGTCATCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTCAGCCTGATTTAATATTATGCGACAGGTTGATCTGTGTGCCGTCGCCGGTGATAATCGCTTATGATG‑TAAAACAGATACGGGTGCGGACCCTCTTGCTCTg                                                                                                                                                                                                                                                     >  2:140340/1‑289 (MQ=255)
                                 tttGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTc                                                                                                                                                                                                                                                  >  1:1091410/1‑289 (MQ=255)
                                        cTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATa                                                                                                                                                                                                                                                                            >  1:1254283/1‑256 (MQ=255)
                                        cTGTTCTTCGCGCGTGCCTTCTGCGGCCAGCGGCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGAtggtg                                                                                                                                                                                                                                           <  2:2722931/289‑1 (MQ=255)
                                               tcGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAGGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGACGGTCgtgt                                                                                                                                                                                                                                       >  1:1830067/1‑286 (MQ=255)
                                               tcGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTaaa                                                                                                                                                                                                                                                                                   >  1:665012/1‑242 (MQ=255)
                                                cgcgCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGa                                                                                                                                                                                                                                                <  1:222414/276‑1 (MQ=255)
                                                  cgcTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCCACGGTGAGAACCGCTT‑TTTAGTTAAAACCGATACGGGTCAGGAACATCTTTATCTCTTCGCGTGTTGTGTTCTgg                                                                                                                                                                                                                                  >  2:1791877/1‑288 (MQ=255)
                                                             tgctgcCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGGTGGTGGTGTTCTGGCTCTCATCgaga                                                                                                                                                                                                                      >  1:2131343/1‑289 (MQ=255)
                                                             tgctgcCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCgaga                                                                                                                                                                                                                      >  2:1508850/1‑289 (MQ=255)
                                                             tgctgcCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCgaga                                                                                                                                                                                                                      <  1:2020356/289‑1 (MQ=255)
                                                                 gcCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATa                                                                                                                                                                                                                                                                            <  1:880896/231‑1 (MQ=255)
                                                                  ccAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGAt                                                                                                                                                                                                                 >  1:733109/1‑289 (MQ=255)
                                                                              ttCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGcgtcgt                                                                                                                                                                                                      >  1:1759555/1‑288 (MQ=255)
                                                                              ttCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGtt                                                                                                                                                                                                     <  2:176556/289‑1 (MQ=255)
                                                                                cGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCa                                                                                                                                                                                                   <  1:1443021/289‑1 (MQ=255)
                                                                                           ggCTTCTTCCCAGGCTTCATAGGCGTTCACGATACGCGCCACCACACGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCCGCACTTCGATGGCGTGACGTCAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAACACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGACTGATACACGCGTCGTTCAGCGTACGACCa                                                                                                                                                                                        <  1:2408210/289‑1 (MQ=255)
                                                                                             cttcttCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTAAGGAACATCTTCATCTGTTCGATGGGGTTGTTTGGGCTCTCATCGAGAATTATTAACGGGTCGTTCAGCGTAGGACAAc                                                                                                                                                                                       >  2:886178/1‑288 (MQ=255)
                                                                                                             aTAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGt                                                                                                                                                                      <  1:2693795/289‑1 (MQ=255)
                                                                                                                  cGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCg                                                                                                                                                                   >  1:1023881/1‑287 (MQ=255)
                                                                                                                   cttAACGATACGCGCCACGACAGGATGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCCCTGCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGAc                                                                                                                                                                 <  2:1323858/287‑1 (MQ=255)
                                                                                                                    ttAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAAcgcg                                                                                                                                                                                                          >  1:1739438/1‑246 (MQ=255)
                                                                                                                    ttAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAAcgcg                                                                                                                                                                                                          <  2:1739438/246‑1 (MQ=255)
                                                                                                                    ttAAAGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGtt                                                                                                                                                                                                                                      <  2:1675412/218‑1 (MQ=255)
                                                                                                                      aaCGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGAtggtgg                                                                                                                                                                                                                                          <  1:1627570/212‑1 (MQ=255)
                                                                                                                      aaCGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCa                                                                                                                                                             >  1:546153/1‑289 (MQ=255)
                                                                                                                       aCGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCaa                                                                                                                                                            <  1:461195/289‑1 (MQ=255)
                                                                                                                                gcCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCAc                                                                                                                                                                                       >  1:1930590/1‑253 (MQ=255)
                                                                                                                                gcCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTg                                                                                                                                                    <  1:2716713/288‑1 (MQ=255)
                                                                                                                                          ggTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCCGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATCAACGCGTCGTTCAGCGTACGACCCCGCATCTAGGCCAGCGGTGCGACTGCAATAAGTTTGCGCTCAATCAg                                                                                                                                         >  2:570430/1‑289 (MQ=255)
                                                                                                                                            tGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGt                                                                                                                                                                      <  1:2657290/258‑1 (MQ=255)
                                                                                                                                            tGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGtt                                                                                                                                       >  1:1416857/1‑289 (MQ=255)
                                                                                                                                            tGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGtt                                                                                                                                       >  1:1721392/1‑289 (MQ=255)
                                                                                                                                               cGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGTACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAGTGATAAACGCGGCGTTCAGCGTAGCACCCAGCATATAGGCCAGCCGTGCCGCTTCCATAATGTTGGGCTCAATCCGTTtc                                                                                                                                     >  2:799958/1‑288 (MQ=255)
                                                                                                                                               cGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTtc                                                                                                                                     >  1:216397/1‑288 (MQ=255)
                                                                                                                                               cGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTAATATGTTCGATGGTGGTGTTCTGGCTCTCATGGAGAATGATAAACCCGTCGTTTAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTACAATAACGTTGCCCTCATTCATTTtc                                                                                                                                     >  2:2475175/1‑288 (MQ=255)
                                                                                                                                                   tcaggTCTTCGCTGAGGAATAATTTAATGCTTGTTTCTTCGCCTACTGCCGGAGCTTCGAGGGAGTGACGTAAGCATGATTTAGTATTGCGCGGCAGGTCGGTCTGTGTTACGTCCCGGGTGTTAACCGCTT‑TTGAGTTAAAACCGCTGCGGGTCAGGAACAGCTTCATCGGTTGGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGGCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAAGAACGTTGCGCTCAATCAGTTTCTCGAc                                                                                                                                <  2:1190300/285‑1 (MQ=255)
                                                                                                                                                    cACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGc                                                                                                                                                                    <  2:852703/252‑1 (MQ=255)
                                                                                                                                                    cACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACt                                                                                                                               >  1:825121/1‑289 (MQ=255)
                                                                                                                                                    cACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCAAGCGGTGCGACTTCAATAACGTGGCGCTCAATCAGTTTCTCGCCt                                                                                                                               >  2:2371651/1‑289 (MQ=255)
                                                                                                                                                            cGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCAt                                                                                                                                                                                                                                                        >  2:2681265/1‑160 (MQ=255)
                                                                                                                                                               tttgGAAGAAGTTACAGCGAATCTCTTCGGAATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGcc                                                                                                                    <  2:1431827/287‑1 (MQ=255)
                                                                                                                                                                 tgGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGtt                                                                                                                                                                                                                                                   <  1:339311/160‑1 (MQ=255)
                                                                                                                                                                  ggAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCa                                                                                                                  <  2:105644/288‑1 (MQ=255)
                                                                                                                                                                           tAAAGCTGACTTTTTCGACATCGGCAAGCACTTCGATGGCGTGGCGTAAGCCGTGTTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTAGCCGGTTATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCaaa                                                                                                        <  2:1255802/289‑1 (MQ=255)
                                                                                                                                                                            aaaGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACg                                                                                                                                                                                            <  2:1954764/204‑1 (MQ=255)
                                                                                                                                                                             aaGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACa                                                                                                      <  1:149500/289‑1 (MQ=255)
                                                                                                                                                                                   aTCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCTAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTATCGACTTTCTCAAAGCCCAGCATTTCAAACAGcgcg                                                                                                 >  1:1270864/1‑288 (MQ=255)
                                                                                                                                                                                   aTCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGcgcg                                                                                                 >  1:2603231/1‑288 (MQ=255)
                                                                                                                                                                                    tctcTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCa                                                                                                                                                                                        >  2:924410/1‑200 (MQ=255)
                                                                                                                                                                                    tctcTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCa                                                                                                                                                                                        <  1:924410/200‑1 (MQ=255)
                                                                                                                                                                                        ttCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGct                                                                                                                                                                                                                                <  2:2349592/156‑1 (MQ=255)
                                                                                                                                                                                        ttCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTAc                                                                                           >  1:254075/1‑289 (MQ=255)
                                                                                                                                                                                                cGGCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAgc                                                                                                    >  2:659575/1‑272 (MQ=255)
                                                                                                                                                                                                  gCCAGCACTTCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGa                                                                                                                                                                                                                                                                  >  2:1867319/1‑112 (MQ=255)
                                                                                                                                                                                                    cAGCACTTCGATTGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACTTTGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGTTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGa                                                                               <  1:299064/289‑1 (MQ=255)
                                                                                                                                                                                                           tCGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGt                                                                        <  1:2275289/289‑1 (MQ=255)
                                                                                                                                                                                                            cGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGct                                                                                                                                                                                                                                <  1:1205820/136‑1 (MQ=255)
                                                                                                                                                                                                            cGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGAc                                                                                                                                                                                          >  1:999857/1‑174 (MQ=255)
                                                                                                                                                                                                            cGATGGCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTAGTACAGCGGGCGCCGAAACGGGt                                                                        >  2:687220/1‑288 (MQ=255)
                                                                                                                                                                                                                 gCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACtt                                                                  >  2:2109838/1‑289 (MQ=255)
                                                                                                                                                                                                                 gCGTGACGTAAGCCTGATTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACtt                                                                  >  1:851860/1‑289 (MQ=255)
                                                                                                                                                                                                                   tggACGTAAGCCTGAGTTAGTATTACGCGGCAGGTCGATCTGGGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACttt                                                                 <  2:1593845/286‑1 (MQ=255)
                                                                                                                                                                                                                            gcctgatttAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTTCAGCGGGCGCAGATa                                                                             >  2:2464401/7‑267 (MQ=255)
                                                                                                                                                                                                                            gcctgatttAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTaaa                                                       >  1:1121820/7‑289 (MQ=255)
                                                                                                                                                                                                                                 atttAGTATTACGCGGCAGGCCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCCCAATCAGTTTCTCGACTTTCGCAAAGCCCAGCATTTCAAACAGCGCGTCTTACAGCCGGCCCAGAGACGGGACTACTTTCTGGCTTAAATCGcc                                                  >  2:260233/2‑289 (MQ=255)
                                                                                                                                                                                                                                            cgcgGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACg                                                                                                                                                                                            <  2:123179/140‑1 (MQ=255)
                                                                                                                                                                                                                                            cgcgGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGAc                                                                                                                                                                                          <  2:114833/142‑1 (MQ=255)
                                                                                                                                                                                                                                            cgcgGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGAc                                                                                                                                                                                          >  1:114833/1‑142 (MQ=255)
                                                                                                                                                                                                                                            cgcgGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAg                                        >  1:656035/1‑288 (MQ=255)
                                                                                                                                                                                                                                                gCAGGTCGATTTGTTTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCTATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCa                                    <  2:1120845/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGgcgc                                                                                  <  2:2216592/241‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGt                                  >  2:204102/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 cAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGt                                  >  2:1383532/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   ggTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGtt                                 >  1:247222/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    gTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCTTCGTACAGCGGGCGCAGATCCGGGTCTACTTTCTGGCTTAAATCCGCAGGCAGGAACCCCAGttt                                >  2:2646962/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    gTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATa                                                                             <  1:2737656/243‑1 (MQ=255)
                                                                                                                                                                                                                                                       gagcttggtcaCGTCGCAGGGTATACCCGCTT‑TTGATTTAAAACCGATACGGGTCAGGAACATCTTCATCTGGTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAATGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAAGCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGGCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCa                            <  1:2459683/279‑1 (MQ=255)
                                                                                                                                                                                                                                                       gATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCa                            <  1:1957130/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           tgtgtgACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCg                         >  1:1301574/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              gtgACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAACGCCCAGCATTTCAAACAGCGCGTCGTAAAGCGGGCGCAGAGACGGGTCTACt                                                                   >  2:2737656/1‑243 (MQ=255)
                                                                                                                                                                                                                                                              gtgACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCtt                     <  1:357501/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                gACGTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTc                    <  1:1383532/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cGTCGCCGGTGATAACCGCTT‑TTGAGTTACAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTAc                 <  2:403660/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACt                                                                                                                               >  1:2302094/1‑178 (MQ=255)
                                                                                                                                                                                                                                                                   gTCGCCGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACt                >  1:1174693/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ccGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGgc                                                                                    >  1:1681619/1‑217 (MQ=255)
                                                                                                                                                                                                                                                                       ccGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACAGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACTGCCg            >  1:1541192/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ccGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTAGTCAAACGGGCGCAGATAAGGGCCTACTTTCTGGCCTAACTCGCCATGCAGGAAGCCCAGCTTCTCACCGTCCTCTGCTGCCg            >  2:2236138/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ccGGTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCCCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCTGGCGCAGATACGGCTCTACTTTCTGGCTTAAATCCCCCGGCCGGAAGCCCAGTTTCTCACCGGCTTCTACTGcag            >  2:1659000/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                         ggTGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACTGCCGGa          <  1:605547/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tGATAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCa                                                                                                                  >  2:35594/1‑183 (MQ=255)
                                                                                                                                                                                                                                                                              tAACCGCTT‑TTGAGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACTGCCGGACGAg      >  2:2273744/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
GCCAGTTGTAAATCGAGGATCACCTGACTCATTTTTGTTCCTGTTCTTCGCGCTTGCGTTCTGCTGCCAGCGCCGCTTTTCGTTTTTGTTCGGCTTCTTCCCAGGCTTCATAGGCGTTAACGATACGCGCCACCACAGGGTGACGAACCACGTCTTCGCTGTGGAAGAAGTTAAAGCTGATCTCTTCGACATCGGCCAGCACTTCGATGGCGTGACGTAAGCCACTTTTAGTATTACGCGGCAGGTCGATCTGTGTGACGTCGCCGGTGATAACCGCTT‑TACTGTTAAAACCGATACGGGTCAGGAACATCTTCATCTGTTCGATGGTGGTGTTCTGGCTCTCATCGAGAATGATAAACGCGTCGTTCAGCGTACGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACTGCCGGACGAGTCAG  >  CP042583/564742‑565303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A