Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 572,081 6 bp→CGACGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583572,0810GC97.7% 583.1 / ‑4.4 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/4);  new base C (127/124);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 4.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583572,0820CG98.1% 597.0 / ‑5.2 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/3);  new base G (127/126);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583572,0830TA98.8% 614.9 / ‑1.3 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (127/127);  minor base G (1/2);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01
*CP042583572,0840GC98.4% 596.4 / ‑0.3 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  major base C (127/125);  minor base A (1/3);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583572,0850CG98.8% 599.9 / ‑6.2 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/2);  new base G (127/127);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583572,0860TA99.2% 616.1 / ‑3.4 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (128/128);  minor base G (1/1);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

Only 100 of 258 total aligned reads displayed.

TATTTTACGGGGGCCAAATTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACACTCGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑GCTGC‑TAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCGCTATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTGCACCGTTAG  >  CP042583/571813‑572355
                                                                                                                                                                                                                                                                             |||||||                                                                                                                                                                                                                                                                              
      aCGGGGGCCAAATTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAAt                                                                                                                                                                                                                                                          <  2:456370/289‑1 (MQ=255)
       cGGGGGCCAAATTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATc                                                                                                                                                                                                                                                         <  1:784641/289‑1 (MQ=255)
             ccAAATTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTcc                                                                                                                                                                                                                                                   >  1:2047260/1‑289 (MQ=255)
                 aTTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAc                                                                                                                                                                                                                                               <  1:2060692/289‑1 (MQ=255)
                 aTTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAc                                                                                                                                                                                                                                               <  2:624563/289‑1 (MQ=255)
                    gCTGAAAAAGTGGGATTGGTTCATACCGGATGCGGCGTGAACGCCTTATCCGGACTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGAGTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAcc                                                                                                                                                                                                                                              <  1:864156/287‑1 (MQ=37)
                       gACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGCTATCGTCGAGCGCCG‑‑AAACACCAGAAA‑CACACAGAATCGTCACCAGAcctg                                                                                                                                                                                                                                            >  2:1746966/1‑286 (MQ=37)
                                 gATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGc                                                                                                                                                                                                                               <  1:1869956/289‑1 (MQ=255)
                                  aTTTGTTAATGCCGGCTGCAGCGTGAACCCCTTATCCGGCCTACAAAAGCATGAAAATTTAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGGGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGc                                                                                                                                                                                                                               <  2:434357/288‑1 (MQ=255)
                                   tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCTGCGACTGACGGGTAAATCCATCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGTAAGCCGGCCa                                                                                                                                                                                                                             <  1:934814/289‑1 (MQ=38)
                                        tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCACaaac                                                                                                                                                                                                                        >  2:1985971/1‑287 (MQ=38)
                                         cATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAatat                                                                                                                                                                                                                       <  1:1382614/289‑1 (MQ=255)
                                                 aTGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACg                                                                                                                                                                                                                <  1:1284651/288‑1 (MQ=255)
                                                    cggcgTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGTGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCCgg                                                                                                                                                                                                            >  2:2367471/1‑289 (MQ=38)
                                                     ggcgTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGt                                                                                                                                                                                                           >  1:1347774/1‑289 (MQ=255)
                                                     ggcgTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGt                                                                                                                                                                                                           >  1:20229/1‑289 (MQ=255)
                                                          gAACCCCTTTTCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGTCCTGATAACCGTAGCTCATCATGCAGTTTGGCGTTTGTCATCAGATCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCg                                                                                                                                                                                                      <  1:1034852/289‑1 (MQ=255)
                                                                             cAAAAGCATTAAAATTCAATTTATTGCAGGGGCTGAGTAGGCCTGATAAGCGTAGCGAATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTttctt                                                                                                                                                                                   <  2:2436568/289‑1 (MQ=255)
                                                                                     tGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAc                                                                                                                                                                                                                                               >  1:2577688/1‑221 (MQ=39)
                                                                                     tGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTttcttccgaatgc                                                                                                                                                                           >  1:2347070/1‑282 (MQ=255)
                                                                                           ttCGATATATTGCAGGAGATGCGTAGGCCTGAAAAGGGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATgcgc                                                                                                                                                                         <  2:120715/285‑1 (MQ=255)
                                                                                             cAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCAt                                                                                                                                                                   >  1:1225934/1‑289 (MQ=255)
                                                                                                      gCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAg                                                                                                                                                                                                                                    <  2:594527/215‑1 (MQ=255)
                                                                                                          gAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑Ca                                                                                                                                                                                                                                                              <  2:2054299/185‑1 (MQ=38)
                                                                                                            ggtGCTTAGGCCTGATAAGCGTAGCGAATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAAtgctg                                                                                                                                                     <  2:550163/286‑1 (MQ=255)
                                                                                                            gCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAAtgctgc                                                                                                                                                    >  1:2263813/1‑289 (MQ=255)
                                                                                                            gCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCAACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCCCCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAAtgctgc                                                                                                                                                    >  1:1411724/1‑289 (MQ=255)
                                                                                                             cTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTttct                                                                                                                                                                                    >  2:1477559/1‑256 (MQ=255)
                                                                                                                cGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGc                                                                                                                                                                                                                               <  2:2444718/210‑1 (MQ=255)
                                                                                                                 gTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCAACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGga                                                                                                                                               <  1:796258/289‑1 (MQ=255)
                                                                                                                       cTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATcc                                                                                                                                         <  1:1158855/289‑1 (MQ=255)
                                                                                                                        tgatcaggatcgcgcATAAGGCAGTGTGTCGTTACTAATCAGACGCAGCCACGCCAGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATcc                                                                                                                                         <  2:2240170/277‑1 (MQ=255)
                                                                                                                          aTAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGCAAGCAC‑CAGACTCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCCCCTGCATTTTGTTTAATGCTGCCTGGATGATCCACg                                                                                                                                      >  2:35610/1‑289 (MQ=255)
                                                                                                                          aTAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACg                                                                                                                                      >  1:2477521/1‑289 (MQ=255)
                                                                                                                          aTAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTACCGCCGACCATCACCGTTTCTTCCGAATGCGCCTGCTTTTTGTTTAATGCTTCCTGGATGATCCCCg                                                                                                                                      >  2:2114121/1‑289 (MQ=255)
                                                                                                                          aTAAGCGTAGAGAATGTGGCGGTTTGGGTGTTGTCATCAGGACCATCCCCGTCCGCAGACGTGGTTCCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAAACCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCG‑G‑GCGACGAAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATcc                                                                                                                                         <  2:1296568/286‑1 (MQ=255)
                                                                                                                            agaggtaaggcgtgaGGCGGTTTGGCGATGGTCAGCCGGGCCAACAACGTCCGCAGACGTGGTTGGTATTCAGGTAACGGCGAGTTCAGCAAATGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGAGATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGGCTCCCGACCTGGCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACggg                                                                                                                                    <  2:1411724/275‑1 (MQ=255)
                                                                                                                             aGCGTATGGCCTCAGGCAGTTGGGAGTTTGGCATCAGGGCCAACCACGTCCGCAGACATGGTGGCGATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCGGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggc                                                                                                                                   <  2:1158450/289‑1 (MQ=255)
                                                                                                                               cGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggctg                                                                                                                                 >  1:1694098/1‑289 (MQ=255)
                                                                                                                                 tAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGc                                                                                                                                                                                                                               <  1:1054078/193‑1 (MQ=255)
                                                                                                                                  aGCGCATCAGGCACTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCTATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggctggg                                                                                                                               <  1:1805122/288‑1 (MQ=255)
                                                                                                                                    cgcATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGcc                                                                                                                                                                                                                                  >  1:592025/1‑187 (MQ=255)
                                                                                                                                    cgcATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggctgggctg                                                                                                                            >  1:481406/1‑288 (MQ=255)
                                                                                                                                    cgcATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCtt                                                                                                                            >  1:2491834/1‑289 (MQ=255)
                                                                                                                                       aTCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTAc                                                                                                                          <  1:1985971/288‑1 (MQ=255)
                                                                                                                                        tCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCa                                                                                                                        <  1:2437910/289‑1 (MQ=255)
                                                                                                                                         cAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAcc                                                                                                                                                                                                                                              <  1:1831257/170‑1 (MQ=255)
                                                                                                                                                tttGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTgcgc                                                                                                                                                  >  1:272648/1‑255 (MQ=255)
                                                                                                                                                tttGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTgcgc                                                                                                                                                  <  2:272648/255‑1 (MQ=255)
                                                                                                                                                tttGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTGTCTTAATGCTGCCCGGATTGTCCACGGGCTGGGCTCACCAACCTATaa                                                                                                                >  2:170396/1‑289 (MQ=255)
                                                                                                                                                tttGGCGTGGGTCATCAGAGCCAAACACGTCCGCCGACGTGGTTGCTATTCAGAGAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACggg                                                                                                                                    <  2:2019367/269‑1 (MQ=255)
                                                                                                                                                 ttGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAAc                                                                                                               >  1:1128226/1‑289 (MQ=255)
                                                                                                                                                 ttGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCCCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGATGCGCGGATGATCCCCGGGCTGGGCTCACAAACATAGAAc                                                                                                               >  2:885768/1‑289 (MQ=255)
                                                                                                                                                          gTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGACTGCGCCTGCATTTTGTTTAATGCTGCGCGGCTGATCCACGGGCTGGGCTTAc                                                                                                                          >  1:2019367/1‑269 (MQ=255)
                                                                                                                                                                   agcAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTttcttccgaa                                                                                                                                                                              >  1:437295/3‑204 (MQ=255)
                                                                                                                                                                      aaCCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGAttt                                                                                            >  1:733719/1‑287 (MQ=255)
                                                                                                                                                                       aCCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGAc                                                                                                                                                                                                                                               <  1:1848260/139‑1 (MQ=255)
                                                                                                                                                                       aCCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGATGGGCTTAc                                                                                                                          >  2:1540552/1‑256 (MQ=255)
                                                                                                                                                                        ccACGTCCGCAGACGTGTTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGTAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTtctc                                                                                        <  1:61551/289‑1 (MQ=255)
                                                                                                                                                                          aCGTCCGGAGACGTGGTTGCTAGTCAGATACCGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCGC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCaa                                                                                      <  2:1450404/289‑1 (MQ=255)
                                                                                                                                                                          aCGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCaa                                                                                      <  1:2405119/289‑1 (MQ=255)
                                                                                                                                                                            gTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTAc                                                                                                                          >  1:717687/1‑251 (MQ=255)
                                                                                                                                                                            gTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGA‑‑GCGAC‑GAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGaa                                                                                                                                                                                                                          <  2:1811385/154‑1 (MQ=255)
                                                                                                                                                                                 cAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCa                                                                                                                                                                    <  2:2602916/204‑1 (MQ=255)
                                                                                                                                                                                 cAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTg                                                                                >  1:1191184/1‑288 (MQ=255)
                                                                                                                                                                                   gACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTtctc                                                                                        <  1:1433800/278‑1 (MQ=255)
                                                                                                                                                                                        ggTTGCTATTCAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACggg                                                                                                                                    <  1:2081452/229‑1 (MQ=255)
                                                                                                                                                                                                  cAGATAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGga                                                                                                                                               <  1:1489066/208‑1 (MQ=255)
                                                                                                                                                                                                     aTAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGCAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGGACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGTCTTTCCCAATCCCTTCACCCAACGCCGCACAAGCgg                                                           >  2:1917324/1‑289 (MQ=255)
                                                                                                                                                                                                     aTAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggctggg                                                                                                                               <  2:1680255/221‑1 (MQ=255)
                                                                                                                                                                                                     aTAACGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAg                                                              >  2:16170/1‑286 (MQ=255)
                                                                                                                                                                                                       aaCGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACgggctggg                                                                                                                               <  1:2172439/219‑1 (MQ=255)
                                                                                                                                                                                                        aCGTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTAc                                                                                                                          >  2:1106891/1‑223 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCGGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGAtt                                                                                             <  2:312732/250‑1 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGcc                                                                                                                                                                                                                                  <  2:726912/117‑1 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCCTTTTGTTTAATGCTGCGCGGATGATCCACGGGCCGGGCCTACCAACATAGAACGGTTTGCGCCCGGAGCTTTTCCCAACCCCTGCACACAACCCCCCCCACGCGGGCTaa                                                      >  2:2573809/1‑289 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTaa                                                                                                                                                          <  2:843802/189‑1 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACa                                                                                                                     <  2:2291261/226‑1 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATaa                                                      >  1:1473538/1‑289 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCCCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGCTTTTCTCAATCCCTGCACACAACGGCCCACAAGCGGGCTaa                                                      >  2:1837806/1‑289 (MQ=255)
                                                                                                                                                                                                          gTCGATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAAGATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCCTTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCAAACAACgcgcaccaacccggcaaa                                                      >  2:662699/1‑275 (MQ=255)
                                                                                                                                                                                                             gATTTCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCAGACTGTCGATATCGTCGAC‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGTGCTGGGCTTACCAACATAGAACGGTTTGCGCCCTGTGATTTTCTCAATCCCTGCACACCACGCCCCCCAAGCCGGATaaaca                                                   >  2:1804524/1‑287 (MQ=255)
                                                                                                                                                                                                               tttCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAAcc                                                 <  1:1797015/289‑1 (MQ=255)
                                                                                                                                                                                                               tttCAGCGACTGACGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCAAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAAcc                                                 <  1:324898/289‑1 (MQ=255)
                                                                                                                                                                                                                                     ccAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGga                                                                                                                                               <  2:2535122/173‑1 (MQ=255)
                                                                                                                                                                                                                                     ccAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGga                                                                                                                                               >  1:2535122/1‑173 (MQ=255)
                                                                                                                                                                                                                                              gCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATtggtg                        >  1:922855/1‑283 (MQ=255)
                                                                                                                                                                                                                                              gCGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGAt                   <  2:1369803/288‑1 (MQ=255)
                                                                                                                                                                                                                                               cGGAAAGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGACTGCTCCTGCATTTTGTTTAATGCTGCGTGGATGATCCACGGGCTGGGCTTCCCAACATAGAACGGTTTGCGCCCGGAGAGTTTCTCAATCCATGCACACAACGCGCCAACAGCGGGATAAAACCCGCACGCGTGGGGTGCCGGAtctgtcacgctca                 >  2:73794/1‑277 (MQ=255)
                                                                                                                                                                                                                                                    aGGCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGt            <  1:350439/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      gCATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTg           <  2:2217143/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      gCATACGGTAGACATAGTCGAG‑GGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTg           <  2:1862158/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       cATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGACAGCAC‑CAGAATCGTCTCAAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGAGCCCGTGGGTGTCCTGATTGGTTGCGATAAAACGTg           <  1:1624922/287‑1 (MQ=255)
                                                                                                                                                                                                                                                       cATACTGTCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTGc          >  2:203683/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCa                                                                                                                                        >  2:785017/1‑155 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGaa                                                                                                                <  1:1727680/179‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTtctc                                                                                        >  2:1174052/1‑203 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACACTGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAACCGTGCACCGTTa   >  1:538764/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTGCACCGTTa   >  1:1957848/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              tCGATATCGTCGAG‑CGACG‑AAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGAAGGTTATCGCCGACAATCACCGTTTCTTCCGAATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCACGGAGCTTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATACAACGTGCACAGttca  >  2:426917/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             |||||||                                                                                                                                                                                                                                                                              
TATTTTACGGGGGCCAAATTGCTGACAAAGTGCGATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCGCAGACGTGGTTGCTATTCAGATAACGTCGATTTCAGCGACACTCGGGTAAATCCAGCTGGGGCGGAAAGGCATACTGTCGATATCGTCGAG‑GCTGC‑TAACACCAGAAAGCAC‑CAGAATCGTCTCCAGACCTGCCTGGAAGCCGGCCAGAATATCGGTACGCAGGTTATCGCCGACAATCACCGTTTCTTCGCTATGCGCCTGCATTTTGTTTAATGCTGCGCGGATGATCCACGGGCTGGGCTTACCAACATAGAACGGTTTGCGCCCGGAGATTTTCTCAATCCCTGCACACAACGCGCCACAAGCGGGATAAAAACCGCGCCCGTGGGTGTCCGGATTGGTGGCGATAAAACGTGCACCGTTAG  >  CP042583/571813‑572355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A