Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 611,352 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583611,3520GC99.4% 771.7 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (146/175);  total (147/177)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,3530CG99.4% 765.7 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (147/174);  minor base T (0/2);  total (147/177)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,3540TA99.7% 779.6 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (147/176);  minor base G (0/1);  total (147/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

TGCTCATTGTGTGGCGACGTATATCCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGACTAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGGCTCATATGAATATTAGCGGGATCGCCGCTGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTA  >  CP042583/611075‑611631
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
tcgacATTGGATGGCGACGTATATCCAGCAAATTAAATTTACCAAAATCAATAGCCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAat                                                                                                                                                                                                                                                                              <  2:2491501/285‑1 (MQ=255)
       tgtgtgGCGACGTATATCCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCg                                                                                                                                                                                                                                                                       >  1:2586909/1‑289 (MQ=255)
                   tataTGCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATcgcccga                                                                                                                                                                                                                                                            >  1:2661203/1‑285 (MQ=255)
                   tataTCCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATcgcccga                                                                                                                                                                                                                                                            >  2:1556804/1‑285 (MQ=255)
                   tataTCCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATcgcccga                                                                                                                                                                                                                                                            >  2:187018/1‑285 (MQ=255)
                          aGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAAttt                                                                                                                                                                                                                                                    >  1:2736673/1‑289 (MQ=255)
                            cAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                  >  1:2295543/1‑289 (MQ=255)
                            cAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                  >  1:1825771/1‑289 (MQ=255)
                             aaattaaattTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                  <  1:1556804/288‑1 (MQ=255)
                               attaaattTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGt                                                                                                                                                                                                                                                 >  2:198516/1‑287 (MQ=255)
                               attaaattTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTc                                                                                                                                                                                                                                               <  2:275543/289‑1 (MQ=255)
                                              atcaatcaCCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATcgcg                                                                                                                                                                                                                                <  1:1180220/289‑1 (MQ=255)
                                                   tcaCCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCATCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           <  1:1678023/289‑1 (MQ=255)
                                                   tcaCCGGTTTTTCCGGTGAAATGGAAAAATTGAAGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           <  2:2412868/289‑1 (MQ=255)
                                                        tgtgTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCt                                                                                                                                                                                                                      <  1:301526/289‑1 (MQ=255)
                                                          tgtTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCACATCGCGATGATCTGCTCa                                                                                                                                                                                                                    >  1:1533619/1‑289 (MQ=255)
                                                                 ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           >  1:787089/6‑275 (MQ=255)
                                                                 ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtat                                                                                                                                                                                                             <  1:1907602/284‑1 (MQ=255)
                                                                 ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtat                                                                                                                                                                                                             <  2:1130137/284‑1 (MQ=255)
                                                                    gaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           >  2:623815/3‑272 (MQ=255)
                                                                    gaaaTGGAAAAATTAACGCTGCAAGCCAGCACGCGAATGTTTTCCGGACCGATAATATGATAATTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCCCGAAGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATaaa                                                                                                                                                                                                          <  2:2463160/287‑1 (MQ=255)
                                                                      aaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           >  2:2372479/1‑270 (MQ=255)
                                                                      aaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           <  1:2372479/270‑1 (MQ=255)
                                                                      aaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAata                                                                                                                                                                                                        >  1:997692/1‑289 (MQ=255)
                                                                        tGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATc                                                                                                                                                                                                      <  2:904988/289‑1 (MQ=255)
                                                                           aaaaaTTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCaa                                                                                                                                                                                                    <  2:2685126/288‑1 (MQ=255)
                                                                                       tGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGt                                                                                                                                                                                        <  1:668579/288‑1 (MQ=255)
                                                                                        ggaaTCCAGCACGCGAATGTTTTCCAGACCCGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                      <  1:508436/287‑1 (MQ=255)
                                                                                        gCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                      <  1:1391628/289‑1 (MQ=255)
                                                                                          aaTCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGAt                                                                                                                                                                                    <  2:2295543/289‑1 (MQ=255)
                                                                                             ccAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                 <  2:8785/289‑1 (MQ=255)
                                                                                             ccAGCACGCGAATGTTTTCCAGACCAGTAATAGTGTATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCATGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                 <  1:2173322/289‑1 (MQ=255)
                                                                                                 cACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                 <  1:224675/285‑1 (MQ=255)
                                                                                                      gAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTTAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGccatccca                                                                                                                                                                                                                                     <  2:2274997/228‑1 (MQ=255)
                                                                                                                    ccAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtata                                                                                                                                                                                                            >  1:2305589/1‑239 (MQ=255)
                                                                                                                       gTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTa                                                                                                                                                                                                                                                                          <  2:2146764/174‑1 (MQ=255)
                                                                                                                       gTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTa                                                                                                                                                                                                                                                                          >  1:2146764/1‑174 (MQ=255)
                                                                                                                             tGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                           >  2:191890/1‑215 (MQ=255)
                                                                                                                               atatTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCCATGCGACTTTTTCCCAGACtt                                                                                                                                               >  2:2192265/1‑288 (MQ=255)
                                                                                                                                  tttCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                            >  2:31944/1‑289 (MQ=255)
                                                                                                                                     cAGGTTTTGGTCAGTAGGGTCTTCGTTAACGCTACGCGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCg                                                                                                                                         <  2:1811930/289‑1 (MQ=255)
                                                                                                                                          tttGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           >  2:377388/1‑234 (MQ=255)
                                                                                                                                          tttGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           <  1:2444497/234‑1 (MQ=255)
                                                                                                                                             gggCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGac                                                                                                                                 >  2:753239/1‑289 (MQ=255)
                                                                                                                                               gCATTAGGTTCTTCGTTAACGCTACCGGCACCGTCAAATTGAACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                <  2:1042296/288‑1 (MQ=255)
                                                                                                                                               gCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                <  2:2197799/288‑1 (MQ=255)
                                                                                                                                                        tCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATg                                                                                                                      >  2:1304490/1‑289 (MQ=255)
                                                                                                                                                                  cGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                  <  1:1794863/155‑1 (MQ=255)
                                                                                                                                                                  cGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           >  1:696088/1‑210 (MQ=255)
                                                                                                                                                                      aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAatat                                                                                                                                                                                                       >  1:354627/1‑194 (MQ=255)
                                                                                                                                                                      aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAatat                                                                                                                                                                                                       <  2:354627/194‑1 (MQ=255)
                                                                                                                                                                      aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           <  1:2703746/206‑1 (MQ=255)
                                                                                                                                                                      aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGa                                                                                                        <  1:628898/289‑1 (MQ=255)
                                                                                                                                                                      aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGa                                                                                                        >  2:474728/1‑289 (MQ=255)
                                                                                                                                                                       ccGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                >  1:1425531/1‑264 (MQ=255)
                                                                                                                                                                            aCCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCt                                                                                                                                                                                                                      >  2:702414/1‑173 (MQ=255)
                                                                                                                                                                            aCCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCt                                                                                                                                                                                                                      <  1:702414/173‑1 (MQ=255)
                                                                                                                                                                            aCCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                 >  1:1734961/1‑210 (MQ=255)
                                                                                                                                                                               gTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCAATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGa                                                                                               >  1:2225895/1‑289 (MQ=255)
                                                                                                                                                                                tCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                <  2:940693/255‑1 (MQ=255)
                                                                                                                                                                                tCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                >  1:940693/1‑255 (MQ=255)
                                                                                                                                                                                      tGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATGTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATAGTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCa                                                                                        <  2:663307/289‑1 (MQ=255)
                                                                                                                                                                                         acgacgATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACATTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAccc                                                                                     <  2:2579594/289‑1 (MQ=255)
                                                                                                                                                                                          cgacgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAcccc                                                                                    <  2:1679137/289‑1 (MQ=255)
                                                                                                                                                                                          cgacgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAccc                                                                                     >  2:1616956/1‑288 (MQ=255)
                                                                                                                                                                                             cgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGt                                                                                                                                                                            <  2:2635321/198‑1 (MQ=255)
                                                                                                                                                                                                tataGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATa                                                                              >  2:2535202/1‑289 (MQ=255)
                                                                                                                                                                                                       gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           <  2:2050080/173‑1 (MQ=255)
                                                                                                                                                                                                       gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                           >  1:2050080/1‑173 (MQ=255)
                                                                                                                                                                                                       gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                            >  1:1292669/1‑220 (MQ=255)
                                                                                                                                                                                                       gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGttt                                                                       >  2:183748/1‑289 (MQ=255)
                                                                                                                                                                                                       gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGttt                                                                       >  1:1630729/1‑289 (MQ=255)
                                                                                                                                                                                                         tAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAgtg                                                                           >  1:131809/1‑281 (MQ=255)
                                                                                                                                                                                                         tAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTa                                                                      >  1:1238646/1‑288 (MQ=255)
                                                                                                                                                                                                          aaGCGTGCTTTGATAATCCTTCGGCGGCATTTCTCGGATTTTGACGTCTAACCGCATGCGAGCGGGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                    <  2:272265/289‑1 (MQ=255)
                                                                                                                                                                                                          aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTa                                                                                                                                       >  2:806745/1‑222 (MQ=255)
                                                                                                                                                                                                          aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTGATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                    <  1:31944/289‑1 (MQ=255)
                                                                                                                                                                                                          aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                    <  1:2535202/289‑1 (MQ=255)
                                                                                                                                                                                                             cGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAccc                                                                   <  2:576564/287‑1 (MQ=255)
                                                                                                                                                                                                               tACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                            <  2:2097600/212‑1 (MQ=255)
                                                                                                                                                                                                               tACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                            >  1:2097600/1‑212 (MQ=255)
                                                                                                                                                                                                                       tAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                 >  1:110712/1‑167 (MQ=255)
                                                                                                                                                                                                                       tAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACt                                                                                                                                                            <  2:1493377/188‑1 (MQ=255)
                                                                                                                                                                                                                           cATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                      >  1:1030829/1‑158 (MQ=255)
                                                                                                                                                                                                                           cATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTc                                                   >  1:1139948/1‑289 (MQ=255)
                                                                                                                                                                                                                            aTGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATa                                                                                                                                                                                   >  1:875667/1‑160 (MQ=255)
                                                                                                                                                                                                                              gcggcgGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCt                                                >  2:1529543/1‑289 (MQ=255)
                                                                                                                                                                                                                                    gcATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCaaa                                          >  1:1866488/1‑289 (MQ=255)
                                                                                                                                                                                                                                            cGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGt                                  <  1:198516/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                    <  1:2411295/235‑1 (MQ=255)
                                                                                                                                                                                                                                                                cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAg              >  2:1730170/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAAGTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGTTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATCATAACGTTCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGAATTCCTCCCCTTCCTAGTTGACGTTGGTCTTGTTTGCACAATat              >  2:1942937/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 aTGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGt                                        >  2:1437234/1‑262 (MQ=255)
                                                                                                                                                                                                                                                                  tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCt                                                    <  1:363696/249‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATtgttgt                      >  2:1771356/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                  tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGAc            >  1:2277949/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     gagcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg         <  1:474728/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gagcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg         <  2:1256752/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      agcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGAAATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGa        >  2:1400759/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aaaGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATATTa  <  2:1238646/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
TGCTCATTGTGTGGCGACGTATATCCAGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGACTAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGGCTCATATGAATATTAGCGGGATCGCCGCTGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTA  >  CP042583/611075‑611631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A