Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F210 I1 R1	4928	340.1	5480506	96.9%	5310610	252.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	655,246	3 bp→CGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	655,246	0	G	C	99.7%	775.8 / NA	331	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (172/158); total (173/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*	CP042583	655,247	0	C	G	99.7%	783.5 / NA	331	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (172/157); total (173/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	655,248	0	T	A	99.7%	786.9 / NA	328	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (171/156); minor base C (1/0); total (172/156)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 331 total aligned reads displayed.

TGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGGCTAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGATCGCTAACGGCCTGATAAATGCCAAT  >  CP042583/654969‑655524

|||

tGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAaacaaaca                                                                                                                                                                                                                                                                               >  2:2338031/1‑288 (MQ=255)

    aTCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAAcaacaa                                                                                                                                                                                                                                                                           <  2:335691/288‑1 (MQ=255)

              caAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCAc                                                                                                                                                                                                                                                                <  2:2082750/289‑1 (MQ=255)

              caAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCAc                                                                                                                                                                                                                                                                <  1:96260/289‑1 (MQ=255)

              aaaaaagttAGCCGTTTTTTTTGCGCGATTAAGTGAGTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTAAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCAc                                                                                                                                                                                                                                                                <  2:2732038/282‑1 (MQ=255)

                      tAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTa                                                                                                                                                                                                                                                        >  2:585449/1‑289 (MQ=255)

                          cGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATc                                                                                                                                                                                                                                                     <  2:2414416/288‑1 (MQ=255)

                              ttttATGGGCGATTAAGTAATTATAAAACAGAGGGTTTATGAATTGTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTGGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGcac                                                                                                                                                                                                                                                <  2:956693/289‑1 (MQ=255)

                              ttgtttGCGCGTTTAGGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCCTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGcac                                                                                                                                                                                                                                                <  2:1885635/284‑1 (MQ=255)

                                                        aaCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAAGTGCGTTTCACCTTCGCTAATCAGCACATCCACAAAACGGCGGAACAGCTGGc                                                                                                                                                                                                                      >  2:841370/1‑289 (MQ=255)

                                                           agagGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGAt                                                                                                                                                                                                                   >  2:782085/1‑289 (MQ=255)

                                                             agGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTa                                                                                                                                                                                                                                                        <  2:1092273/250‑1 (MQ=255)

                                                             agGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTc                                                                                                                                                                                                                 >  1:472046/1‑289 (MQ=255)

                                                               ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTTGTTCCAAACAAACAACAATTGCGTTACACCTTCGCTTATCAGCACATCTATAAAAAGGCAGATAAGGTggagcttgaa                                                                                                                                                                                                               >  2:1281317/1‑281 (MQ=255)

                                                                    atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGAt                                                                                                                                                                                                          <  2:1910073/289‑1 (MQ=255)

                                                                         tgaTTGCGCTTTTTATCTGAAGAAAGACGCGGTGTCATGCCTGCATGCGTCGACCCGTTGGCCGGAGCGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTAAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGc                                                                                                                                                                                                     <  2:1508554/289‑1 (MQ=255)

                                                                         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAg                                                                                                                                                                                                                                                   >  2:1312325/1‑243 (MQ=255)

                                                                         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAg                                                                                                                                                                                                      >  1:70109/1‑288 (MQ=255)

                                                                         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGc                                                                                                                                                                                                     <  1:1953112/289‑1 (MQ=255)

                                                                         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGc                                                                                                                                                                                                     <  2:736641/289‑1 (MQ=255)

                                                                             tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGcc                                                                                                                                                                                                    >  1:281111/1‑286 (MQ=255)

                                                                                  tttttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGt                                                                                                                                                                                            <  1:2338031/289‑1 (MQ=255)

                                                                                    tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCAc                                                                                                                                                                                                                                                                >  2:1019966/1‑219 (MQ=255)

                                                                                                             aTGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGa                                                                                                                                                                 <  1:1875139/289‑1 (MQ=255)

                                                                                                             aTGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAAGTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGa                                                                                                                                                                 <  2:1553215/289‑1 (MQ=255)

                                                                                                              tGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCAt                                                                                                                                                                                     <  1:2128978/268‑1 (MQ=255)

                                                                                                                   gCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGc                                                                                                                                                                                                     >  2:2151432/1‑247 (MQ=255)

                                                                                                                   gCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTc                                                                                                                                                           >  1:925379/1‑289 (MQ=255)

                                                                                                                        cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCAc                                                                                                                                                         <  2:925379/286‑1 (MQ=255)

                                                                                                                         gTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGc                                                                                                                                                                          <  2:1371261/268‑1 (MQ=255)

                                                                                                                                  ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACa                                                                                                                                            >  1:37641/1‑289 (MQ=255)

                                                                                                                                    ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAAt                                                                                                                                          <  2:472046/289‑1 (MQ=255)

                                                                                                                                       cGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCa                                                                                                                                        <  1:1018799/288‑1 (MQ=255)

                                                                                                                                          agagGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGAACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAgcg                                                                                                                                     <  2:367032/288‑1 (MQ=255)

                                                                                                                                               gTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAg                                                                                                                                                                                                                                                   >  2:2019586/1‑173 (MQ=255)

                                                                                                                                               gTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAg                                                                                                                                                                                                                                                   <  1:2019586/173‑1 (MQ=255)

                                                                                                                                               gTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGccc                                                                                                                                                                                                   >  2:2210480/1‑221 (MQ=255)

                                                                                                                                                   caaGGCCGCCTCCCGCAAGGTCAGAACTACCAACCCAATTTTGTTTTGTAAGGACATAGCGATAGAGTCCCCCGTCCGGCACGGACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACgctg                                                                                                                           <  2:1351296/288‑1 (MQ=255)

                                                                                                                                                        ccgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCg                                                                                                                                                                   >  1:2146723/1‑244 (MQ=255)

                                                                                                                                                         cgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTcc                                                                                                                     <  2:37641/289‑1 (MQ=255)

                                                                                                                                                         cgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTc                                                                                                                      <  1:1593192/288‑1 (MQ=255)

                                                                                                                                                            cTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAg                                                                                                                                                                                                                                                   <  1:427222/160‑1 (MQ=255)

                                                                                                                                                                  aaaGGTCAGAACTACCGACTCAATATATTTTTGTCAGCACATAGCGAGAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGaaa                                                                                                             <  2:2285268/287‑1 (MQ=255)

                                                                                                                                                                   aaGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGa                                                                                                           <  1:841370/289‑1 (MQ=255)

                                                                                                                                                                      gTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCATTCCCCAGGAAAGAcca                                                                                                        >  2:1793903/1‑287 (MQ=255)

                                                                                                                                                                                ccGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGAGCAAGGCCCTGTAGGGGTTCATCGAGAATAAGCAACGACGGATGTTTCACCAGTGCGCGGACAATCAGCACCAGACGCTGCTGGCCACGTGAAAGAATATGGAACGGAg                                                                                              >  2:212656/1‑289 (MQ=255)

                                                                                                                                                                                   aCTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCg                                                                                                                                                                                                                                                           <  1:1174169/129‑1 (MQ=255)

                                                                                                                                                                                   aCTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCg                                                                                                                                                                                                                                                           >  2:1174169/1‑129 (MQ=255)

                                                                                                                                                                                     tCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGa                                                                                                                                                                 >  1:1721791/1‑217 (MQ=255)

                                                                                                                                                                                     tCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGa                                                                                                                                                                 <  2:1721791/217‑1 (MQ=255)

                                                                                                                                                                                     tCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCCCCAGCCGCAGCTGTCCCCAGGAAGAGCTAAGGAAGGGAggggca                                                                                         >  2:1326609/1‑284 (MQ=255)

                                                                                                                                                                                        atatatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGGATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTAGGGAACGGAGCGTCAGc‑c                                                                                     >  1:1093567/1‑289 (MQ=255)

                                                                                                                                                                                        atatatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGc‑c                                                                                     <  1:228227/289‑1 (MQ=255)

                                                                                                                                                                                        atatatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGc‑c                                                                                     <  1:1232754/289‑1 (MQ=255)

                                                                                                                                                                                        atatatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGc‑c                                                                                     <  1:585449/289‑1 (MQ=255)

                                                                                                                                                                                        atatatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGc‑c                                                                                     <  1:1803522/289‑1 (MQ=255)

                                                                                                                                                                                          atatTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGc                                                                                                                                                                          <  1:1555904/203‑1 (MQ=255)

                                                                                                                                                                                             tttttGTCAGACCATGGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCg                                                                                <  2:894347/289‑1 (MQ=255)

                                                                                                                                                                                              ttttGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTAGGGAACGGAggggccgcccgccgg                                                                                >  1:1333923/1‑275 (MQ=255)

                                                                                                                                                                                                 tGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCa                                                                                                                                                                                                        <  1:1427681/166‑1 (MQ=255)

                                                                                                                                                                                                 tGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCa                                                                                                                                                                                                        >  2:1427681/1‑166 (MQ=255)

                                                                                                                                                                                                   tCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCa                                                                                                                                                                                                        >  1:1312461/1‑164 (MQ=255)

                                                                                                                                                                                                     aGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAAcg                                                                                                                                                                                                                                    <  1:2502269/134‑1 (MQ=255)

                                                                                                                                                                                                       cacaTAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACAATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGGGCGCGGACAATCAGCGCCAGACGCTGCTGGCCCCAGGCAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATccac                                                                       >  2:2135226/1‑285 (MQ=255)

                                                                                                                                                                                                        acaTAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATg                                                                      <  1:2206975/288‑1 (MQ=255)

                                                                                                                                                                                                        acaTAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGc                                                                     <  1:2105028/289‑1 (MQ=255)

                                                                                                                                                                                                            aGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTgg                                                                                                                                                                                          <  2:2659897/169‑1 (MQ=255)

                                                                                                                                                                                                            aGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTgg                                                                                                                                                                                          >  1:2659897/1‑169 (MQ=255)

                                                                                                                                                                                                            aGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCgag                                                                 >  1:741064/1‑289 (MQ=255)

                                                                                                                                                                                                                      tCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCAcc                                                                                                                                                        <  1:686704/193‑1 (MQ=255)

                                                                                                                                                                                                                      tCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCAcc                                                                                                                                                        >  2:686704/1‑193 (MQ=255)

                                                                                                                                                                                                                      tCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGTAACGGAGCGTCAGC‑CGTGCGGTTAGCAATGCCGAGAATATGCAg                                                        >  1:1470351/1‑288 (MQ=255)

                                                                                                                                                                                                                       ccACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGc                                                       <  1:1049708/288‑1 (MQ=255)

                                                                                                                                                                                                                       ccACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGc                                                       <  1:1661340/288‑1 (MQ=255)

                                                                                                                                                                                                                        cACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCg                                                                                                                                                                   <  2:1609130/180‑1 (MQ=255)

                                                                                                                                                                                                                        cACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTAt                                                                           <  2:225552/267‑1 (MQ=255)

                                                                                                                                                                                                                        cACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTAt                                                                           >  1:225552/1‑267 (MQ=255)

                                                                                                                                                                                                                        cACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGcc                                                      >  1:893017/1‑288 (MQ=255)

                                                                                                                                                                                                                         aCCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGa                                                                                                           >  1:1222246/1‑235 (MQ=255)

                                                                                                                                                                                                                         aCCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAAc                                                                                                  >  1:1406384/1‑244 (MQ=255)

                                                                                                                                                                                                                           cGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATc                                                                          >  2:1669188/1‑265 (MQ=255)

                                                                                                                                                                                                                             tCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGa                                                                                                                                                                                                                    <  2:122500/126‑1 (MQ=255)

                                                                                                                                                                                                                               cGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGG‑CGGGCGTTTAGCAATGCCGAGAATAGCAAGCAAcggcctc                                              >  2:26748/1‑286 (MQ=255)

                                                                                                                                                                                                                                ggCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCa                                             <  2:2562846/289‑1 (MQ=255)

                                                                                                                                                                                                                                ggCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAG‑GGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCa                                             >  1:1634540/1‑288 (MQ=255)

                                                                                                                                                                                                                                       aCTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCa                                                                         >  1:1362809/1‑254 (MQ=255)

                                                                                                                                                                                                                                       aCTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGc                                                                     >  2:1638728/1‑258 (MQ=255)

                                                                                                                                                                                                                                       aCTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGCGAATCTCCAGCCACTGCTGCACCAGttt                                      >  1:650134/1‑289 (MQ=255)

                                                                                                                                                                                                                                               cGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTgg                               <  2:1050617/288‑1 (MQ=255)

                                                                                                                                                                                                                                                 aTGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGa                            >  1:1750978/1‑289 (MQ=255)

                                                                                                                                                                                                                                                  tGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTCCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCCGCCCCAGTTTTTGCTGGcca                            >  2:496071/1‑286 (MQ=255)

                                                                                                                                                                                                                                                   gggTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAg                                                                                        >  1:1274106/1‑228 (MQ=255)

                                                                                                                                                                                                                                                   gggTAATACAGGCAGGCGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGAt                           >  1:2575929/1‑288 (MQ=255)

                                                                                                                                                                                                                                                              gcaggcGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGGTCAAGCCCCTGTAGTGGTTCATCGAGAATCAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCCCCAGCTTTTGCTGGCGATccgaaacgggcc               >  2:413107/1‑278 (MQ=255)

                                                                                                                                                                                                                                                              gcaggcGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCCGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGCATATTCAGCAACTGCTGCACCAGTTTTGTCTGGCGacccgaaccgt                  >  2:1805405/1‑276 (MQ=255)

                                                                                                                                                                                                                                                              gcaggcGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCActgc                                                 <  1:525692/255‑1 (MQ=255)

                                                                                                                                                                                                                                                              gcaggcGCATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAAAGTCGGATGTTTCACCAGTGCGCGTACAATAAGCGCCAGACGGTGCGGTCCCCAGGAAAGACTATGGAACGGCAGGTCAGCACGT‑AGGTTATCAATGCAGAGAACAACTAGCCACTGCCTAAACAGTCTTTGCTGGCgtgccgagagggtcg               >  2:508715/1‑275 (MQ=255)

                                                                                                                                                                                                                                                              gcaggcGCATCTTCAGCGTGGTGCGAAACAAAAAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTAACAATGCCGAGAATATCCAGCCACTGCTGCCCCAGTCTTTGCTGACTATccgaaacgg                  >  2:653154/1‑278 (MQ=255)

                                                                                                                                                                                                                                                                   cgcATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATc                                                                                                                                                                                                                                                     >  1:2674762/1‑55 (MQ=255)

                                                                                                                                                                                                                                                                   cgcATCTTCAGCGTGGTGCGAAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGATCCGAAACGGCCTGATaa          >  1:2445157/1‑289 (MQ=255)

|||

TGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGCATCTTCAGCGTGGTGGCTAACAAACAACAATTGCGTTTCACCTTCGCTAATCAGCACATCAACAAAACGGCGGATAAGCTGGCGATTCAGCGGATCAAGCCCCTGTAGTGGTTCATCGAGAATAAGCAACGTCGGATGTTTCACCAGTGCGCGGACAATCAGCGCCAGACGCTGCTGTCCCCAGGAAAGACTATGGAACGGAGCGTCAGC‑CGTGCGTTTATCAATGCCGAGAATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGATCGCTAACGGCCTGATAAATGCCAAT  >  CP042583/654969‑655524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A