Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
662,317 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 662,317 | 0 | A | T | 97.1%
| 850.1
/ ‑6.0
| 376 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (173/190); minor base C (11/0); total (184/192) |
| Fisher's exact test for biased strand distribution p-value = 3.50e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 662,318 | 0 | G | C | 99.7%
| 883.4
/ NA
| 376 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (182/192); total (184/192) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 662,319 | 0 | C | G | 99.7%
| 887.8
/ NA
| 376 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (183/191); total (184/192) |
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 376 total aligned reads displayed.
AAAGATCCGCACGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTAGCGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCAGCGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAA > CP042583/662035‑662595
|||
aaaGATCCGCACGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCAAAGCGGGAAGTAACCGATGGCCGCCCGGCAAAAATCTCACCACATCCGGGtat > 2:378691/1‑289 (MQ=255)
aCGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAAttg < 1:1851083/288‑1 (MQ=255)
gTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAAttgttg < 1:924121/288‑1 (MQ=255)
atatCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGa < 1:2444617/289‑1 (MQ=255)
aaTGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAggg > 1:234246/1‑289 (MQ=255)
aaTGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTCTTCAGCGTTTCGGAAGATGCCAGCGTGTTGAGTAAAGAAGGCTCCCAGCCAACGGAAACCCAGCCGCGCGGCTCCGATGTTGATCACAGCGGCAAGTATCAGACTGCCGCCGGGCCAAAATCTCACCACCTCTCGGTCTACGAAATTGTTGGCGAGCAggg > 2:299400/1‑289 (MQ=255)
tgtgTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGATCGTACCGCCAGCCTGATTAACGTTTTCAGCGTTTCGGACGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCGTCAATGTTGATCACAGAGGCAAGTATCTGATTGCCGCCGGGAAAAAATCTAACCCCATACCGGTATACGATATTGTTTGCGCGCAGGGGc > 2:1540809/1‑289 (MQ=255)
tgtgTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGc > 2:2053722/1‑283 (MQ=255)
tgtgTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAgggg > 1:719707/1‑288 (MQ=255)
tgtgTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAggg > 1:1008327/1‑287 (MQ=255)
tgtgTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGGATCCGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGGAAACGAAACTGTTGGCGAGGAgggg > 2:17005/1‑288 (MQ=255)
tgtCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCt > 1:2388532/1‑288 (MQ=255)
tgtCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCt > 2:1489323/1‑288 (MQ=255)
gtCCAGGCGCTGGATATGAAGGCGGAAAACTTCTCCGACAACCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTa < 2:775759/288‑1 (MQ=255)
tatGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGc < 1:1809848/289‑1 (MQ=255)
gatgCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTAGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGcc > 1:884671/1‑287 (MQ=255)
gCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTa > 2:1267542/1‑268 (MQ=255)
cGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCCGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCCCGCGGCCTCAATGTTGATCACAGCGGCAAGTATCTGATTCCCGCCGGCACAAAAGCTCACCCCCTCTCGGTATACGAAATTGTTCGCGAGCCTGGGCTTGTGCATGCACAAGGCCGCTCTGc > 2:1340102/1‑289 (MQ=255)
cGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGTAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGc > 2:516508/1‑289 (MQ=255)
aaaCTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCGACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCCAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGt < 1:1645574/288‑1 (MQ=255)
aaaCTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGt < 2:1782515/288‑1 (MQ=255)
gACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGAc < 1:2615496/289‑1 (MQ=255)
acacCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAACTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGAcc < 2:1417633/289‑1 (MQ=255)
cacCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGAcc < 1:1912127/288‑1 (MQ=255)
cccGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAAt < 1:1742386/289‑1 (MQ=255)
cGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACCCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCCGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAAtgt < 1:1952380/289‑1 (MQ=255)
tGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATgtggg > 1:784021/1‑289 (MQ=255)
ggcggcTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAACAATCTCACCACATCTCGGTAGACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCGGCTATGCGGTCGGGCAGGGACCAATgtgggtg > 1:1227875/1‑289 (MQ=255)
ggcggcTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATgtgggt < 1:2260681/288‑1 (MQ=255)
gcTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTCCCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTGGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCCCGCGGCTTCAATGTTGATCACAGCGGCACGTATCTGATGTCCGCCGGGCAAAAATCTCACCACACCCCGCTATACGCAATTGTTGGCGAGCAGGGGCGACTGCCTGACAAAGCGCGCGATGCGGTCGGGCAGGGACCGAGgggggtaggtg > 2:1983089/1‑284 (MQ=255)
cTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTa > 1:1128324/1‑236 (MQ=255)
cTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGc > 1:2011944/1‑267 (MQ=255)
atatTCATATTACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGaaaaa > 1:1897021/1‑245 (MQ=255)
tatCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATgtgg < 2:241177/271‑1 (MQ=255)
cACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCa > 2:502562/1‑255 (MQ=255)
aCCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACGAATGTGGGTGGGGGTTAA‑CGCACACTaa > 2:2333501/1‑288 (MQ=255)
ccccGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAAcc > 1:2427957/1‑289 (MQ=255)
cccGGATGGTCGCGATTTATCCGCCTGGGACCGTACCGCCAGCCTGAGTACCGTGTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCg < 2:955647/289‑1 (MQ=255)
cccGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAAcc > 1:2178525/1‑288 (MQ=255)
cccGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCACCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGTGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCg < 1:135385/289‑1 (MQ=255)
cGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAAcc > 2:162603/1‑286 (MQ=255)
aTGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGc > 1:2237191/1‑207 (MQ=255)
cGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCCCACCACATCTCGGTATCCGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGCCAGGGACCAAGGTGGGTGGTGGTTAA‑CGACCACTAACCGCTGATTTA‑c > 2:1865449/1‑288 (MQ=255)
cGCCATTCATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGACAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCATGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑c < 1:2066764/288‑1 (MQ=255)
cATGTATCCGCCGGCGACCGTACCGCCAGCCTAATTACCATTTTCAGCGTTTCGGAAGATGGCAGCGGGTTGATTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCg < 2:884671/288‑1 (MQ=255)
aTTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGgc < 1:246457/289‑1 (MQ=255)
tttATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGgcg < 2:1055336/289‑1 (MQ=255)
ttATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGgcgc < 1:65082/289‑1 (MQ=255)
taCGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATCCGAAATTGTTGGCGAGCAGGGGCTACGGCATGAAAAAGGCCGCTAGGCGGTCGGGCCAGGCCCAATGGGGGGGGTGGTTAACCGCA‑ACTACCCGCGGATTTA‑CCCGgtgccg > 2:2209150/1‑286 (MQ=255)
taCGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGt < 1:1777275/289‑1 (MQ=255)
taCGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGt < 2:2630081/289‑1 (MQ=255)
ccTGCGACCGTACCGCCAGCCTGATTACTGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGgc > 2:2351834/1‑280 (MQ=255)
ccTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCCCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGtctc > 2:815973/1‑288 (MQ=255)
tGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCTCTATGCGGTCGGGc < 1:2659207/226‑1 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGa < 2:1174414/229‑1 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGa > 1:1174414/1‑229 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑Cg > 2:166608/1‑251 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCt > 1:2133991/1‑288 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTg < 1:1680744/289‑1 (MQ=255)
cGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCCGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCgcctgcgtctcgcct > 2:113706/1‑274 (MQ=255)
gTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGTAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCg < 1:516508/289‑1 (MQ=255)
gTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCg < 1:815973/289‑1 (MQ=255)
gCCAGCCTGATTACCGTTTTGAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTa < 1:1269003/289‑1 (MQ=255)
gCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTa < 2:1930614/289‑1 (MQ=255)
ccAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGGGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCCCAGTCCCTCCTGCCCCGGTGTAt > 2:2558356/1‑289 (MQ=255)
cTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTaa < 2:1824959/287‑1 (MQ=255)
tGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCt < 2:1008327/289‑1 (MQ=255)
tGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCt < 1:39307/289‑1 (MQ=255)
tGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCt < 2:2376027/289‑1 (MQ=255)
ttACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCGGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTAt < 1:1460933/288‑1 (MQ=255)
cGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCATACTAACCGCTGCTTTA‑CCCGGCGCAGTCCCTCCTGCCCCGGTTTCTTAACCTAcctcct > 2:2174495/1‑289 (MQ=255)
cAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAAcg < 1:446620/289‑1 (MQ=255)
acgcgtttcgggaGATGGAGGCGTGGTGAGTAAAGGAGGCTTACAGCCAACGGAAACCCGGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAAcg < 2:2243778/277‑1 (MQ=255)
ggCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTc > 2:2302809/1‑289 (MQ=255)
gtTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGata < 1:1340280/288‑1 (MQ=255)
ttGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGcaca > 2:1121327/1‑200 (MQ=255)
aGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAg > 1:1053208/1‑129 (MQ=255)
aaaGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTc < 1:356457/287‑1 (MQ=255)
aagGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACaaa > 1:2737328/1‑289 (MQ=255)
gCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGc < 2:209758/123‑1 (MQ=255)
ttCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTcga < 2:1199971/267‑1 (MQ=255)
ttCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGATGATTTA‑CCCGGCCCAGTCTCTTCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACCAATTg > 1:1196640/1‑287 (MQ=255)
gtCAATGGTAGTCCCAGCGGCACGTAACTGATGGCCGCCGGGCAAAAAACTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCa < 2:791371/287‑1 (MQ=255)
aGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCa < 2:554353/278‑1 (MQ=255)
aGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGt > 1:2510225/1‑287 (MQ=255)
cGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCg < 1:611486/177‑1 (MQ=255)
cGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCt > 1:1536558/1‑189 (MQ=255)
ggCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTctg < 2:2510225/288‑1 (MQ=255)
ggCAAGTATCTGATTGCCGCCGGGAAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCGATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTTTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTctg < 1:2580299/288‑1 (MQ=255)
gaGTAGCTGATTGCCGCCGGGCAAAAAGCGCACCACATCTCAGTATACGGAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGGTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTctgctg < 2:2688189/287‑1 (MQ=255)
aTCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAgg > 2:2457917/1‑102 (MQ=255)
tGATTGCCCCCGGACAAAAATCTCACCACGACTCGGTATACGAAATTGTTGGCGAGGCGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTACCCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGgaga < 2:2022342/289‑1 (MQ=255)
tGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGga > 1:2038536/1‑282 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCg > 2:681216/1‑160 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGatat > 2:1907059/1‑209 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGt < 1:1100306/233‑1 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACg > 2:356040/1‑289 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACg > 1:2317807/1‑289 (MQ=255)
ccgccgGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACg > 1:1592138/1‑289 (MQ=255)
aaaTCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACg < 1:419586/289‑1 (MQ=255)
|||
AAAGATCCGCACGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTAGCGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCAGCGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAA‑CGCACACTAACCGCTGATTTA‑CCCGGCGCAGTCTCTCCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAA > CP042583/662035‑662595
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
