Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 662,723 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583662,7230AT99.7% 671.0 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (145/139);  minor base G (0/1);  total (145/141)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583662,7240CG99.3% 673.8 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (143/139);  total (145/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583662,7250TA99.7% 680.1 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (144/141);  minor base C (1/0);  total (145/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 286 total aligned reads displayed.

TATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATGCTAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCGC‑‑TAATCCCCAGTCCCGCCTCCACCAGTCCTAAACTCGTGCTAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGAACTATTTGTGACGTTGTTCATGTTTATGCCAAAGTCACTTTCGTTACACAGCAC  >  CP042583/662454‑662998
                                                                                                                                                                                                                                                                               |||                                                                                                                                                                                                                                                                                  
tATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCa                                                                                                                                                                                                                                                                  <  1:2716376/289‑1 (MQ=255)
tATTAACCTATATCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCa                                                                                                                                                                                                                                                                  <  1:1581740/289‑1 (MQ=255)
 aTTAAACTTTCTCCTGTAACGCTTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCAc                                                                                                                                                                                                                                                                 <  2:1592138/289‑1 (MQ=255)
          tctcCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGaaaa                                                                                                                                                                                                                                                         >  2:1123129/1‑288 (MQ=255)
          tctcCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTaaa                                                                                                                                                                                                                                                         >  1:2208719/1‑288 (MQ=255)
          tctcCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTaaa                                                                                                                                                                                                                                                         >  1:1903850/1‑288 (MQ=255)
               tGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAg                                                                                                                                                                                                                                                    >  2:2733449/1‑288 (MQ=255)
                      cgTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCCATCCAGCt                                                                                                                                                                                                                                             >  2:1160522/1‑288 (MQ=255)
                      cgTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCt                                                                                                                                                                                                                                             >  2:609813/1‑288 (MQ=255)
                       gtgtCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTc                                                                                                                                                                                                                                           <  1:808533/289‑1 (MQ=255)
                        tgtCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCa                                                                                                                                                                                                                                                >  2:397243/1‑283 (MQ=255)
                        tgtCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTc                                                                                                                                                                                                                                           >  2:555662/1‑288 (MQ=255)
                        tgtCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACAAGTCCTAATGACGTCGAAA‑GATGACGAACGTCGTAAAACCATGCCAGATTcc                                                                                                                                                                                                                                          >  2:956171/1‑289 (MQ=255)
                           ctctGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGATTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAgg                                                                                                                                                                                                                                       >  1:382012/1‑289 (MQ=255)
                              tGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCt                                                                                                                                                                                                                                    <  1:113706/289‑1 (MQ=255)
                                gCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATAACGACCAAA‑GCTGACGCACTTCGAAAAACCAGTCCAGCCTCCCGGGCtcg                                                                                                                                                                                                                                  >  2:880651/1‑287 (MQ=255)
                                   ttCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAAACAGTCCAGCTTCCAGGGCTTGTCg                                                                                                                                                                                                                               >  1:356314/1‑289 (MQ=255)
                                     cgacgaTATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCgg                                                                                                                                                                                                                              >  1:2282241/1‑288 (MQ=255)
                                      gacgaTATTGGTACACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGcc                                                                                                                                                                                                                            <  1:2271741/289‑1 (MQ=255)
                                         gaTATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAg                                                                                                                                                                                                                          <  2:1888299/288‑1 (MQ=255)
                                             ttGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCtgtt                                                                                                                                                                                                                     <  1:609813/289‑1 (MQ=255)
                                                 tCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCAAGGGCTTGTCGGCCAGCtgttgt                                                                                                                                                                                                                   >  1:956204/1‑287 (MQ=255)
                                                     caAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCACTAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGCCTAATCGGCCCGCCGTCGTTCTATc                                                                                                                                                                                                             >  2:2369551/1‑289 (MQ=255)
                                                     caAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTAt                                                                                                                                                                                                              >  2:675803/1‑288 (MQ=255)
                                                     caAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATc                                                                                                                                                                                                             >  1:412451/1‑289 (MQ=255)
                                                     caAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATc                                                                                                                                                                                                             >  1:2645883/1‑289 (MQ=255)
                                                          tGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCa                                                                                                                                                                                                                                                                  <  1:1625115/231‑1 (MQ=255)
                                                           gTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAAccg                                                                                                                                                                                                        >  1:1742322/1‑286 (MQ=255)
                                                             cTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCg                                                                                                                                                                                                     >  1:2507673/1‑289 (MQ=255)
                                                              tttATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCGAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCTGCCAGCTGTTGTTCTATCAACAGTCgg                                                                                                                                                                                                    >  1:761241/1‑289 (MQ=255)
                                                                tttCGTAATTCCAAAAATAAATCAGCAAGGCAAAAAAACGTTCTGCTGCTGGACAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGTTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCTGTCCCGCCTCCACCAGTCCTAACGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGtt                                                                                                                                                                                                  <  2:2103030/287‑1 (MQ=255)
                                                                tATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTACAGCTTCCAGGCCTTGTCGGCAAGCTGTTGTTCTATCAACAGTCGGtt                                                                                                                                                                                                  >  1:2103030/1‑289 (MQ=255)
                                                                  tCGTCAGTCCATAAATTAATCAGCAAGGAAAAAAAGCGTTCTGCTGCTGAAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAAAGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGc                                                                                                                                                                                                <  1:1185204/289‑1 (MQ=255)
                                                                      cAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGcc                                                                                                                                                                                               >  1:2300678/1‑286 (MQ=255)
                                                                         tCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCGCCGAAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGt                                                                                                                                                                                                                                                            <  2:1406440/224‑1 (MQ=255)
                                                                             tAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCGCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTggagga                                                                                                                                                                                      >  1:2556011/1‑288 (MQ=255)
                                                                                   aaTCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACg                                                                                                                                                                                                                                                                    <  2:1074408/204‑1 (MQ=255)
                                                                                   aaTCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACg                                                                                                                                                                                                                                                                    >  1:1074408/1‑204 (MQ=255)
                                                                                         cAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTcc                                                                                                                                                                                                                                                 >  2:1191746/1‑217 (MQ=255)
                                                                                              cAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGt                                                                                                                                                                                                   >  2:800228/1‑258 (MQ=255)
                                                                                                  aaaGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTaa                                                                                                                                                                <  2:1064345/289‑1 (MQ=255)
                                                                                                                   gagaAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGtt                                                                                                                                                                                                  >  1:2147539/1‑238 (MQ=255)
                                                                                                                          tACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACa                                                                                                                                        >  1:1018025/1‑289 (MQ=255)
                                                                                                                           aCGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGATTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTAc                                                                                                                                         <  2:382012/287‑1 (MQ=255)
                                                                                                                             ggCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCCGCTGTTGTTCTATCACAAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACaa                                                                                                                                       >  1:47861/1‑287 (MQ=255)
                                                                                                                             ggCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCAG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCCGACGCCAATCATTTTTTAACCCACCAACTCTTGCCCTTTCACAAg                                                                                                                                      >  2:4386/1‑288 (MQ=255)
                                                                                                                                   tttACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCttt                                                                                                                               <  1:555662/289‑1 (MQ=255)
                                                                                                                                    ttACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATCCTACAAGCTGCtttt                                                                                                                              >  1:1633358/1‑289 (MQ=255)
                                                                                                                                         gCGAATTATTCCCCATGTTGGACGTAAAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGc                                                                                                                          <  2:2650142/288‑1 (MQ=255)
                                                                                                                                         gCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCAc                                                                                                                                                           <  2:1563979/255‑1 (MQ=255)
                                                                                                                                         gCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGcc                                                                                                                         >  2:2396986/1‑289 (MQ=255)
                                                                                                                                           gAATTATTCCCAATGTTCTACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCa                                                                                                                        <  1:1879226/288‑1 (MQ=255)
                                                                                                                                           gAATTATTCCCAAGGTTCGACGTAAAACGGGTTCCAGCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCa                                                                                                                        <  2:2258683/288‑1 (MQ=255)
                                                                                                                                            aaTTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGcc                                                                                                                                                                                                                            <  2:2152722/187‑1 (MQ=255)
                                                                                                                                             attattCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAAc                                                                                                                                                                                                                                                       <  1:1858/159‑1 (MQ=255)
                                                                                                                                             attattCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAAc                                                                                                                                                                                                                                                       >  2:1858/1‑159 (MQ=255)
                                                                                                                                             attattCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAatg                                                                                                                     >  2:1628165/1‑289 (MQ=255)
                                                                                                                                                      aaTGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACCCCTGCCCTTCTCCAACCTGCTTTTTGGCCAATCGATGCTcc                                                                                                             >  2:336151/1‑287 (MQ=255)
                                                                                                                                                           tCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGc                                                                                                                          <  2:89532/270‑1 (MQ=255)
                                                                                                                                                           tCGACGTATAACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGa                                                                                                       <  2:1018025/289‑1 (MQ=255)
                                                                                                                                                                   taACGGGTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTTCAGCTTCTAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCa                                                                                                >  2:2576175/1‑288 (MQ=255)
                                                                                                                                                                         gTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCa                                                                                                                                                                                                                                                <  2:2183792/138‑1 (MQ=255)
                                                                                                                                                                         gTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCa                                                                                                                                                                                                                                                >  1:2183792/1‑138 (MQ=255)
                                                                                                                                                                         gTTCCACCAATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCCCTAACTCCTGCCATTCCACAAGCTGCCTTTTGGCCAATGGATGGTCCCGCCGACAGGCCAGCACGa                                                                                          >  2:1036790/1‑288 (MQ=255)
                                                                                                                                                                            ccaccaATGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCtg                                                                                                                                                                                                                       >  2:2517562/1‑160 (MQ=255)
                                                                                                                                                                                  aTGGGATACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGtt                                                                                >  1:2031228/1‑289 (MQ=255)
                                                                                                                                                                                        tACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCtg                                                                                                                                                                                                                       <  2:2454731/148‑1 (MQ=255)
                                                                                                                                                                                        tACCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCCTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAg                                                                          >  1:1370062/1‑289 (MQ=255)
                                                                                                                                                                                         aCCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGt                                                                         <  1:336151/289‑1 (MQ=255)
                                                                                                                                                                                         aCCAATAATCGAAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATAAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTGTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCGGt                                                                         >  1:1002559/1‑289 (MQ=255)
                                                                                                                                                                                                atcgaaGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTaa                                                                  >  2:1287349/6‑289 (MQ=255)
                                                                                                                                                                                                           gggCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAgct                                                                                                                                    <  2:1612590/212‑1 (MQ=255)
                                                                                                                                                                                                            ggCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGt                                                                                                                                                                                                                                 >  1:2410744/1‑118 (MQ=255)
                                                                                                                                                                                                            ggCGCATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGt                                                                                                                                                                                                                                 <  2:2410744/118‑1 (MQ=255)
                                                                                                                                                                                                              cgcATGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGAc                                                                             <  2:2290121/264‑1 (MQ=255)
                                                                                                                                                                                                              cgcATGAGGCATTGCAAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGatgaa                                                    >  2:1997823/1‑285 (MQ=255)
                                                                                                                                                                                                                 aTGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAg                                                                                                                                                                                                                          >  1:712337/1‑120 (MQ=255)
                                                                                                                                                                                                                 aTGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGatgaattt                                                 >  1:1221342/1‑282 (MQ=255)
                                                                                                                                                                                                                 aTGAGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGGGGGGTAAAATCa                                                             >  2:1727945/1‑277 (MQ=255)
                                                                                                                                                                                                                    aGGCATTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTtgt                                               <  2:2645883/288‑1 (MQ=255)
                                                                                                                                                                                                                        aTTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCg                                                                                                                                                                                              >  1:888754/1‑141 (MQ=255)
                                                                                                                                                                                                                        aTTGCCAGGCCAGGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACg                                           <  1:2651836/288‑1 (MQ=255)
                                                                                                                                                                                                                           gccaggccagGAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTaa                                                                                                                                                                <  1:1060296/168‑1 (MQ=255)
                                                                                                                                                                                                                               ggccaggAAGCGCCG‑‑AAATCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGAc                                            >  1:635610/1‑280 (MQ=255)
                                                                                                                                                                                                                                            gccgaaaTCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCaa                        >  1:1476552/6‑289 (MQ=255)
                                                                                                                                                                                                                                            gccgaaaTCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCa                         <  1:2449952/283‑1 (MQ=255)
                                                                                                                                                                                                                                               gaaaTCCCCCGGCCCGCCTCAACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAACCCAGTCCAGCTTCCAGGGCTTGTAGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGt                     <  1:1662494/287‑1 (MQ=255)
                                                                                                                                                                                                                                               gaaaTCCCCATTCCCCCCTCCACCAGTCCTAATGACGTCGAAA‑GAGGACGCACTTCGTAAAACCAGTCCGGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGt                     <  2:1473649/287‑1 (MQ=255)
                                                                                                                                                                                                                                                  aTCCCCAGTCCCGCCTTCACCTGTCCTAATTACGTCGAAA‑GTTGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTctg                  <  2:2207467/289‑3 (MQ=255)
                                                                                                                                                                                                                                                  aTCCCCAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTctg                  <  2:721761/289‑3 (MQ=255)
                                                                                                                                                                                                                                                    ccccAGTCCAACCTCCACCCGTGCTAATGAC‑TGCGAACGATGGCGACCTTCGTAAAACCAGTCCAGCTTCCAGGGTGTGGCGGCCAGATGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTctg                  <  2:2696727/287‑3 (MQ=255)
                                                                                                                                                                                                                                                       cggTCCCCCCTCACCCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTctgattcg             <  2:2282241/287‑8 (MQ=255)
                                                                                                                                                                                                                                                       cAGTCCCGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAAt                                                                                                                                                                          <  1:522267/132‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccgaccccaccaGTCCTAGTGACGTCGAAA‑GATGACGCACATCGTAAAACCAGACCAGCTTCCCGTGCTTGTCGGGCAGCTGTTGTGCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTaca        <  2:163967/283‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTaca        <  1:1607309/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccGCCTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTac         >  1:392687/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               ccTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGtt                                                                                >  1:1781926/1‑214 (MQ=255)
                                                                                                                                                                                                                                                               ccTCCACCAGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGtt                                                                                <  2:1781926/214‑1 (MQ=255)
                                                                                                                                                                                                                                                                    accaGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCa                                                                                                                                                            >  1:1317015/1‑133 (MQ=255)
                                                                                                                                                                                                                                                                    accaGTCCTAATGACGTCGAAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCa                                                                                                                                                            <  2:1317015/133‑1 (MQ=255)
                                                                                                                                                                                                                                                                               |||                                                                                                                                                                                                                                                                                  
TATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATTCCCAATGTTCGACGTATAACGGGTTCCACCAATGGGATACCAATAATGCTAGAATAGGGCGCATGAGGCATTGCCAGGCCAGGAAGCGCGC‑‑TAATCCCCAGTCCCGCCTCCACCAGTCCTAAACTCGTGCTAA‑GATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTATCAACAGTCGGTTGCCGCTGGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCGACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGAACTATTTGTGACGTTGTTCATGTTTATGCCAAAGTCACTTTCGTTACACAGCAC  >  CP042583/662454‑662998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A