Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 704,231 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583704,2310GC99.6% 512.1 / NA 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (129/90);  total (130/90)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583704,2320CG99.5% 516.2 / NA 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (128/90);  total (130/90)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583704,2330TA98.6% 508.7 / NA 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (129/87);  minor base G (0/3);  total (130/90)
Fisher's exact test for biased strand distribution p-value = 6.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 220 total aligned reads displayed.

CGGACGGCCCTTTAATCACTTCGACCTGCTCGGTATTGAAGGTGTCGCGGCTGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑GCTGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGGCTAGGCGTACTTGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGGCTATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTG  >  CP042583/703954‑704512
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
       cccTTTAATCACTTCGACCTGCTCGGTATTGAAGGTGTCGCGCGAGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATTGCGTCGCCAGTGG‑TGGAGTTAACGTTCTCACCCGCCAAAAACGCACCCACGCCGGGGACGTTTTTGTGAGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTCATCACTTGTTCTGAAATTACCGTCATCGTTCGGGTAGTCTCCGCTACCGGACGCGCTG‑ATCTCGGAttgca                                                                                                                                                                                                                                                                          >  2:2450365/1‑284 (MQ=255)
       cccTTTAATCACTTCGACCTGCTCGGTATTGAAGGTGTCGCGCGAGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTCAGGGTGGTTGCGCCCTGTACTTTCATAACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCAGCTACCGGACG‑CGAGAATTTCGGATCgtc                                                                                                                                                                                                                                                                          >  2:1419809/1‑286 (MQ=255)
       cccTTTAATCACTTCGACCTGCTCGGTATTGAAGGTGTCGCGCGAGACGCTGCCGATATCGCGAATGCAATCAATATAAATACTGTTAGAGGTATCGGCCCCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGATTGCGTCGGTAAGGATGGTTGCGCCCTGAACTTTAATGACTTGTTCAGAATTTACCGTCATCGTGCGGGTAGTATCCGCTACCGGATG‑CGAGAACTTCGGTACGGCa                                                                                                                                                                                                                                                                         >  1:1621021/1‑289 (MQ=255)
                                 tATTGAAGGTGTCGCGCGAGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCa                                                                                                                                                                                                                                                          <  1:1586359/278‑1 (MQ=255)
                                          tgtCGCGCGAGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGttgatg                                                                                                                                                                                                                                       <  1:203608/288‑6 (MQ=255)
                                                 cgagaagaagCCGATATCGCAGAAGCCATCAATATAAATGCTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGGTGATGCTTCGAc                                                                                                                                                                                                                                <  2:204584/279‑1 (MQ=255)
                                                          gCCGGTATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCgtg                                                                                                                                                                                                                      <  2:864090/289‑1 (MQ=255)
                                                                                        aCTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGgcggcg                                                                                                                                                                                        <  1:854723/289‑1 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCTGGGGCCGTTTTTGAGCGCGTAGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCCACCGGCCG‑CGAGCACTTCGGATCGGCAGATTGTTTTGGCGCGTAGAGCGTGGGCGTCGATGCTTCGGAAACCAGCGTGTCAGCCGCGTTGGTTTCCCCTTccgtgggtgat                                                                                                                                                                                     >  2:1170194/1‑279 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTTTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCCTCCGCGTTAGTTTGCCCTTCGgcggcg                                                                                                                                                                                        >  2:1652474/1‑286 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCTGCGAGt                                                                                                                                                                                     >  2:330838/1‑289 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAgg                                                                                                                                                                                     >  1:955551/1‑288 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGt                                                                                                                                                                                     >  1:773003/1‑289 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGt                                                                                                                                                                                     >  1:445329/1‑289 (MQ=255)
                                                                                           gTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGAGCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CTAGAATTTCGGATCGGCAGATAGTAGTGGCGCATAAAGCGAAGGCGTTGAATCTTAGACAACCATGTTGTCGTCCGCGTTGGTGTGCCGTTcggcgcggatt                                                                                                                                                                                     >  2:1804832/1‑283 (MQ=255)
                                                                                               gagGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTtgtg                                                                                                                                                                                                                                                               <  1:613854/211‑1 (MQ=255)
                                                                                                    aTCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGa                                                                                                                                                                                                                                 <  1:1224301/236‑1 (MQ=255)
                                                                                                    aTCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGcc                                                                                                                                                                            >  1:2719919/1‑289 (MQ=255)
                                                                                                    aTCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGcc                                                                                                                                                                            >  1:57567/1‑289 (MQ=255)
                                                                                                     tCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAAcc                                                                                                                                                                                                                            <  2:1220233/240‑1 (MQ=255)
                                                                                                     tCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGcc                                                                                                                                                                            >  1:744474/1‑288 (MQ=255)
                                                                                                      cGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCg                                                                                                                                                                                                                                                                            <  1:635212/191‑1 (MQ=255)
                                                                                                      cGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCg                                                                                                                                                                                                                                                                            >  2:635212/1‑191 (MQ=255)
                                                                                                      cGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGTCAGATTGTTGTGGCGCATAAAGCGACGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCATTCGGCGGCTAGTTCCTGAGCca                                                                                                                                                                           >  2:2157661/1‑288 (MQ=255)
                                                                                                           ccacGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCg                                                                                                                                                                     <  1:1043405/289‑1 (MQ=255)
                                                                                                            accGCATTTAAAGGGGGTGGCC‑GTGGTTGGAGTTCCCGTTCTAACCCGCAAAAAACGCACCCCCGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGt                                                                                                                                                                    <  2:807979/287‑1 (MQ=255)
                                                                                                             acGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTg                                                                                                                                                                                                     <  1:927915/255‑1 (MQ=255)
                                                                                                             acGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTg                                                                                                                                                                                                     >  2:927915/1‑255 (MQ=255)
                                                                                                             acGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTg                                                                                                                                                                   >  1:1417644/1‑289 (MQ=255)
                                                                                                              cGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTTCCTGAGCCCCAGGCGTGa                                                                                                                                                                  >  1:838247/1‑289 (MQ=255)
                                                                                                              cGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  >  1:2588532/1‑289 (MQ=255)
                                                                                                              cGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  >  1:2366714/1‑289 (MQ=255)
                                                                                                                         ggCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCGGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTTTGGCGCATAAAGCGAGGGCGTTGATGCTTGTACAACCAGCGTGTCATCCTCTTTATTTTGCCTTTCGGCTGCGTGTGCCTGAGCCCCAGGCTTGagtccatgacaa                                                                                                                                                       >  2:1720150/1‑278 (MQ=255)
                                                                                                                           cGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCcgcg                                                                                                                                                                                                             >  1:2443555/1‑233 (MQ=255)
                                                                                                                           cGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAg                                                                                                                                                                              >  2:2372824/1‑264 (MQ=255)
                                                                                                                           cGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  >  2:146022/1‑276 (MQ=255)
                                                                                                                           cGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  <  1:146022/276‑1 (MQ=255)
                                                                                                                             tCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTCGTTTGCCCTTCGGCGCCCAGTGCCTGAGCCACAGGCGTGATTCCAATACAAAGa                                                                                                                                                    >  2:1768365/1‑288 (MQ=255)
                                                                                                                             tCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGcc                                                                                                                                                                                                   <  1:255094/241‑1 (MQ=255)
                                                                                                                             tCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGcc                                                                                                                                                                                                   >  2:255094/1‑241 (MQ=255)
                                                                                                                              cGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGAcc                                                                                                                                                  <  1:2378363/289‑1 (MQ=255)
                                                                                                                               gCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGCCAACCAGCGTTCCATCCGCGTTGGTTTGCCCTTCGTCGGCGAGTTCCTGGGCCACCGCCTGGACGCCAATACaagacccg                                                                                                                                                 >  2:1499518/1‑283 (MQ=255)
                                                                                                                                               aCCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCa                                                                                                                                                                                                                                                          >  2:571112/1‑169 (MQ=255)
                                                                                                                                               aCCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGc                                                                                                                                                               >  1:1892340/1‑260 (MQ=255)
                                                                                                                                               aCCGTGCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGc                                                                                                                                                               <  2:1892340/260‑1 (MQ=255)
                                                                                                                                                     ctcACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGttgatg                                                                                                                                                                                                                                       >  2:620916/1‑177 (MQ=255)
                                                                                                                                                     ctcACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGttgatg                                                                                                                                                                                                                                       <  1:620916/182‑6 (MQ=255)
                                                                                                                                                     ctcACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAgcgaatga                                                                                                                            >  1:12933/1‑282 (MQ=255)
                                                                                                                                                     ctcACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAgcgaatga                                                                                                                            >  1:1135563/1‑282 (MQ=255)
                                                                                                                                                        aCCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATg                                                                                                                                                                >  1:64682/1‑250 (MQ=255)
                                                                                                                                                           cGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGt                                                                                                                      <  1:186572/289‑1 (MQ=255)
                                                                                                                                                             cAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAAcc                                                                                                                                                                                                                            >  2:2172548/1‑185 (MQ=255)
                                                                                                                                                             cAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAAcc                                                                                                                                                                                                                            <  1:2172548/185‑1 (MQ=255)
                                                                                                                                                             cAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGAGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAATTTGACCTTCGGCGGCGAGTGCCTGAGCCACAGGCGGGATGCAAATACAAAGACCGGCAAAGAAAGGGAGGGAATGAAATTg                                                                                                                       >  1:1334825/1‑286 (MQ=255)
                                                                                                                                                                          cACGCCGGGGACGTTTTTGGGCGCGTCGGTAGGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAAGTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTg                                                                                                       <  1:2462399/289‑1 (MQ=255)
                                                                                                                                                                                   gACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGttt                                                                                              >  1:2577025/1‑289 (MQ=255)
                                                                                                                                                                                                 cgTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGcc                                                                                                                                                              >  1:1693417/1‑211 (MQ=255)
                                                                                                                                                                                                 cgTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTc                                                                                            >  2:786508/1‑277 (MQ=255)
                                                                                                                                                                                                  gTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTg                                                                               >  1:999134/1‑289 (MQ=255)
                                                                                                                                                                                                              ggttgCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  >  2:2674823/1‑194 (MQ=255)
                                                                                                                                                                                                              ggttgCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGa                                                                                                                                                                  <  1:2674823/194‑1 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCca                                                                                                                                                                           <  1:547893/178‑1 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCca                                                                                                                                                                           >  2:547893/1‑178 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAGGACCGGCAAAGAACGTGAgcgaatga                                                                                                                            >  2:1928908/1‑218 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAGGACCGGCAAAGAACGTGAgcgaatga                                                                                                                            <  1:1928908/225‑8 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACt                                                                            >  1:713011/1‑273 (MQ=255)
                                                                                                                                                                                                                     cccTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACt                                                                            <  2:713011/273‑1 (MQ=255)
                                                                                                                                                                                                                               tAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAGAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTGGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACt                                                                            <  2:293236/263‑1 (MQ=255)
                                                                                                                                                                                                                               tAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTGGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACt                                                                            >  1:293236/1‑263 (MQ=255)
                                                                                                                                                                                                                                  tCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGcc                                               <  1:2702533/289‑1 (MQ=255)
                                                                                                                                                                                                                                    acttgtctgagaaTTAACGTCATCGTGCGGGTAGTATCCGCAACCGGACG‑CGGGAATTTCGGATCGGCAGATTGTTGTGGCGCAAAAAGCGAAGGCGTTGATGCTTCGACAACCAGCTTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGGGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCAc                                             <  2:1020160/278‑1 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCAt                                                                                                                                                                                                                  >  2:689971/1‑124 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCAt                                                                                                                                                                                                                  <  1:689971/124‑1 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTTCAGGTGACTTTTTCTTCTATGTTTAAATTTTTACTTcc                                               >  2:2244693/1‑287 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTgtctc                                             >  1:801752/1‑285 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCAc                                             >  2:936454/1‑289 (MQ=255)
                                                                                                                                                                                                                                    aCTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGAGTGTTTTCCATTTTGCAGGTTACTTTTTCTTATATGTTGAAATTTTCACTGCCAc                                             >  1:211668/1‑289 (MQ=255)
                                                                                                                                                                                                                                     cTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAg                                                                                                               >  1:1185971/1‑222 (MQ=255)
                                                                                                                                                                                                                                      ttGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCAt                                                                                                                                                                                                                  >  2:2699232/1‑122 (MQ=255)
                                                                                                                                                                                                                                      ttGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACga                                           >  1:2317230/1‑289 (MQ=255)
                                                                                                                                                                                                                                      ttGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACga                                           >  1:2619574/1‑289 (MQ=255)
                                                                                                                                                                                                                                      ttGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGGTAGTTTGCCCTTCGGCGGCGAGTGCCTGTGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACga                                           >  1:209741/1‑289 (MQ=255)
                                                                                                                                                                                                                                           cAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAg                                      <  1:2501250/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aaatgaaggtaaTCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGc                                     <  2:1597460/276‑1 (MQ=255)
                                                                                                                                                                                                                                               aaTGACCGTCATCTGGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCct                                   <  2:12933/288‑1 (MQ=255)
                                                                                                                                                                                                                                                aTTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGcc                                    <  2:1081462/286‑1 (MQ=255)
                                                                                                                                                                                                                                                aTTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGcc                                    >  1:1081462/1‑286 (MQ=255)
                                                                                                                                                                                                                                                        cctcgttggggTAGTTGCCGCTACCGGAGG‑CGAGAATTTCGTATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGga                          <  2:209741/280‑1 (MQ=255)
                                                                                                                                                                                                                                                        cATCGTGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTcgg                                                                                                                                                                                             >  1:1498194/1‑125 (MQ=255)
                                                                                                                                                                                                                                                             tGCGGGTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGgatgcga                     <  2:688398/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                gggTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGgatgcgatgc                  <  1:101663/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ggTAGTATCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGcc                 <  2:2514843/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ggTAGTATCCGCGACCGGACG‑CGAGAATGTCGGATCGGCAGATTGTTGGGGCGCATAAAGCGAGGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGcc                 <  2:2635074/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aTCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGtt           <  2:2718854/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTaa         >  1:1304653/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        tCCGCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTaa         <  2:2317851/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATcc      <  1:2244693/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATc       >  1:2196096/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gCTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATc       >  2:479953/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            cTACCGGACG‑CGAGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGCGAAGGCGTTGATGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGCGAATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATccc     >  1:682793/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
CGGACGGCCCTTTAATCACTTCGACCTGCTCGGTATTGAAGGTGTCGCGGCTGACGCTGCCGATATCGCGAATGCCATCAATATAAATACTGTTAGAGGTATCGGCACCACGCATATAAATGGCGTCGCCAGTGG‑TGGAGTTACCGTTCTCACCCGCAAAAAACGCACCCACGCCGGGGACGTTTTTGAGCGCGTCGGTAAGGTTGGTTGCGCCCTGATCTTTAATCACTTGTTCAGAAATTACCGTCATCGTGCGGGTAGTATCCGCTACCGGACG‑GCTGAATTTCGGATCGGCAGATTGTTGTGGCGCATAAAGGCTAGGCGTACTTGCTTCGACAACCAGCGTGTCATCCGCGTTAGTTTGCCCTTCGGCGGCGAGTGCCTGAGCCACAGGCGTGATGCCAATACAAAGACCGGCAAAGAACGTGAGGCTATGAAATTGTCTGGCAGGGAAATTGCGATTGTTTTCCATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTG  >  CP042583/703954‑704512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A