Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 706,536 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583706,5360GC99.7% 832.4 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (169/179);  minor base A (1/0);  total (170/179)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01
*CP042583706,5370CG99.1% 826.6 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (169/176);  minor base T (1/2);  total (170/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583706,5380TA100.0% 842.3 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (170/179);  total (170/179)

Only 100 of 349 total aligned reads displayed.

GTTTTTTCACCTGGCTGTCGAGGGCAAAGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAAGCTAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGA  >  CP042583/706256‑706813
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
       caactggctggCGGGGGAAAAGCGTACCGTCCAATGTGTGGGTGGCAGCGGGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAatg                                                                                                                                                                                                                                                                          <  2:1891368/286‑1 (MQ=255)
           tGGCTGTCGAGGGCAAAGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCTCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGAtgt                                                                                                                                                                                                                                                                      >  2:331955/1‑289 (MQ=255)
             gCTGTCGAGGGCAAAGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGa                                                                                                                                                                                                                                                                    >  1:2048306/1‑289 (MQ=255)
                     gggCAAAGCGTCCCGTCCACTGTTTGAGTGGAAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGccc                                                                                                                                                                                                                                                             <  1:1674067/288‑1 (MQ=255)
                     gggCAAAGCGTACCGTCCACTGGTTTAGGGGCCGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGccc                                                                                                                                                                                                                                                             <  2:1563603/288‑1 (MQ=255)
                     gggCAAAGCGTACCGTCAACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGccc                                                                                                                                                                                                                                                             <  1:1575066/288‑1 (MQ=255)
                      ggCAAAGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACg                                                                                                                                                                                                                                                                               >  1:546271/1‑269 (MQ=255)
                           aGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACg                                                                                                                                                                                                                                                                               >  2:408188/1‑264 (MQ=255)
                           aGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTAt                                                                                                                                                                                                                                                       >  2:1078485/1‑288 (MQ=255)
                           aGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTAt                                                                                                                                                                                                                                                       >  2:815324/1‑288 (MQ=255)
                             cGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACg                                                                                                                                                                                                                                                                <  1:2394128/277‑1 (MQ=255)
                                aCCGTCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGaa                                                                                                                                                                                                                                                                            >  1:193194/1‑262 (MQ=255)
                                    tCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTAc                                                                                                                                                                                                                                             >  2:2230667/1‑289 (MQ=255)
                                    tCCACTGTTTGAGTGGCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTCATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTAc                                                                                                                                                                                                                                             >  1:383455/1‑289 (MQ=255)
                                                   gCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACg                                                                                                                                                                                                                                                                <  2:500214/255‑1 (MQ=255)
                                                   gCAGCGTGGTGAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGaa                                                                                                                                                                                                                               >  2:144011/1‑288 (MQ=255)
                                                        gtggtgAACGAAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgac                                                                                                                                                                                                                          <  2:1342888/288‑5 (MQ=255)
                                                             gaacgaaaCACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCg                                                                                                                                                                                                                     <  1:1976824/282‑1 (MQ=255)
                                                                 taaggtacgaGTGTAAACGCGGGATGTCTTAAGCCCACAATCCCGTCAAAATTCGGTTCACCAAAAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGAATCTTTCAGTGCCTGATTGGCTTTATCATCATCTTCATTGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAATGTGGTTATCTAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCa                                                                                                                                                                                                                <  2:2056898/280‑1 (MQ=255)
                                                                   aaCACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAACGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑Ct                                                                                                                                                                                                             >  2:2462113/1‑289 (MQ=255)
                                                                            tgtAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCg                                                                                                                                                                                                                     <  1:856426/273‑1 (MQ=255)
                                                                              tAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGaa                                                                                                                                                                                                                                                                            <  2:576373/216‑1 (MQ=255)
                                                                                      gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGTCAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                          >  2:307014/1‑289 (MQ=255)
                                                                                      gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTATCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                          >  2:2609730/1‑289 (MQ=255)
                                                                                      gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgac                                                                                                                                                                                                                          >  1:2716108/1‑254 (MQ=255)
                                                                                      gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCa                                                                                                                                                                                                                <  1:2188658/268‑1 (MQ=255)
                                                                                      gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACAAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGcccaa                                                                                                                                                                                          >  1:448252/1‑287 (MQ=255)
                                                                                            cTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTa                                                                                                                                                                                                                                              >  1:996280/1‑232 (MQ=255)
                                                                                             ttAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCAc                                                                                                                                                                                   <  1:1270257/289‑1 (MQ=255)
                                                                                               aaGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCa                                                                                                                                                                                 <  1:500242/289‑1 (MQ=255)
                                                                                                 gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgacat                                                                                                                                                                                                                        <  2:2332874/249‑7 (MQ=255)
                                                                                                 gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgacat                                                                                                                                                                                                                        >  1:2332874/1‑243 (MQ=255)
                                                                                                 gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCaaa                                                                                                                                                                               >  1:1015396/1‑289 (MQ=255)
                                                                                                   ctaacaTCCCGACTAAATTCGATTCACCAATAATCAGA‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGTCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAAGTCCGCGGACAAAGTAAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGAAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCaaag                                                                                                                                                                              <  2:1484372/283‑2 (MQ=255)
                                                                                                      cAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCa                                                                                                                                                                                                                >  2:2024134/1‑252 (MQ=255)
                                                                                                      cAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTcc                                                                                                                                                                         <  1:1823870/289‑1 (MQ=255)
                                                                                                       aaTCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGGTGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCa                                                                                                                                                                        <  1:1319242/289‑1 (MQ=255)
                                                                                                                 aaaTTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGc                                                                                                                                                              <  1:1078485/289‑1 (MQ=255)
                                                                                                                  aaTTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGcc                                                                                                                                                             <  1:331897/289‑1 (MQ=255)
                                                                                                                            aCCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTa                                                                                                                                                                                                                                              >  1:490509/1‑200 (MQ=255)
                                                                                                                            aCCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                   <  1:358375/289‑1 (MQ=255)
                                                                                                                              cAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCCTTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACCCACCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTGCCA‑CTTTGCCTGTCAACGGCCCGACAGTCACCAAAT‑CCCCAGTGTTCATGCCGTTTTCAAACTg                                                                                                                                                 >  1:1412711/1‑289 (MQ=255)
                                                                                                                              cAATAAGCAGCTCCGCC‑ATTTCTTAGTTTTCCAGTAACTCCGCTACCGCATCTTTCAGTGCCGGAGTGGCATTATCAGCCTCTTCATGGCGATCAACATCAGAATTTGCCACCACCGAACCAATGCCGCGGCAAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTg                                                                                                                                                 <  2:943387/289‑1 (MQ=255)
                                                                                                                                 taatCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGaat                                                                                                                                              <  1:2061975/289‑1 (MQ=255)
                                                                                                                                        c‑ccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgac                                                                                                                                                                                                                          >  1:690684/1‑204 (MQ=255)
                                                                                                                                        c‑ccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATATTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGTATAAATAcc                                                                                                                                       <  2:2104207/289‑1 (MQ=255)
                                                                                                                                        c‑ccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATATTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGTATAAATAc                                                                                                                                        >  1:2104207/1‑288 (MQ=255)
                                                                                                                                        c‑ccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAt                                                                                                                                                                              <  2:236169/251‑1 (MQ=255)
                                                                                                                                        c‑ccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGAC‑AAGGTAGCAAAGGTGGTTAACGAAGACCACCGAATTATGTTATACGCCCCGGTAACCTTTCGTTCGCCCACGGAGCCGATCCAACACCGTTCCACCTGTG‑CGGTCAACGGCCCCGTAAGCACCAAATCCCCCAGTGTCCA‑GCCCTTTTCAAACCTAAAAAAAAcc                                                                                                                                       >  2:122581/1‑288 (MQ=255)
                                                                                                                                             cgAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGa                                                                                                                                                                                                                                                                    >  2:378906/1‑162 (MQ=255)
                                                                                                                                             cgAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCTAGTGTTCATGCCGTTTTCAAACTGaaaaa                                                                                                                                            <  1:2585042/280‑1 (MQ=255)
                                                                                                                                             cgAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATAGAAGACCACGGAATGCTGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGAACTCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCgg                                                                                                                                   >  1:262990/1‑289 (MQ=255)
                                                                                                                                                                        gCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                          >  1:301075/1‑208 (MQ=255)
                                                                                                                                                                        gCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTgcg                                                                                                        >  1:1787464/1‑287 (MQ=255)
                                                                                                                                                                         cTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATTATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTgcga                                                                                                       >  2:1837926/1‑286 (MQ=255)
                                                                                                                                                                          tACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTgcgaa                                                                                                      <  2:293330/289‑5 (MQ=255)
                                                                                                                                                                               cATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACGACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCa                                                                                                                                                                                                                <  2:1704460/180‑1 (MQ=255)
                                                                                                                                                                               cATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCTATAGGCACCAAAT‑CTCCAGTGTTCATGCCCTTTGCAAACTGACTAAATACCCCGCTGATAAAATCTTTCAACAGCGttatccatccaaa                                                                                                 >  2:1602364/1‑278 (MQ=255)
                                                                                                                                                                                   tttCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCa                                                                                                                                                                                 <  2:1984664/206‑1 (MQ=255)
                                                                                                                                                                                      cAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTc                                                                                                                                                                                                    >  1:1491612/1‑184 (MQ=255)
                                                                                                                                                                                      cAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACTGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGTTGATAATATCTTTCACAAGCGTTTGCGAACCaaacgagata                                                                                          >  2:242174/1‑282 (MQ=255)
                                                                                                                                                                                         tGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGataa                                                                                                                             <  1:1989155/251‑1 (MQ=255)
                                                                                                                                                                                          gCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGaat                                                                                                                                              <  2:1753469/233‑1 (MQ=255)
                                                                                                                                                                                              gATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGataa                                                                                                                             >  1:1223313/1‑246 (MQ=255)
                                                                                                                                                                                               aTTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCaaacgag                                                                                             <  1:1719720/277‑5 (MQ=255)
                                                                                                                                                                                               aTTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCt                                                                                 >  2:1729567/1‑289 (MQ=255)
                                                                                                                                                                                                   gCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTCCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACGGAATAAATACCCCGGTGAAAATATCTTTCACCAGCGTTTGCGAACCAAACGAGAAAGCAAGACCTAAt                                                                              >  2:2687961/1‑288 (MQ=255)
                                                                                                                                                                                                        aTCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTTCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAACTACCCCGGGGCTAATATCTTTCACAAGCTTTTCCGAACCAAACGAGATCGCCAAACCTAACTccccc                                                                        >  2:2518411/1‑288 (MQ=255)
                                                                                                                                                                                                        aTCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGGTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGcgcc                                                                         >  2:1241866/1‑288 (MQ=255)
                                                                                                                                                                                                         tCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATAcc                                                                                                                                       >  1:2463733/1‑225 (MQ=255)
                                                                                                                                                                                                             cATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAg                                                                                                                <  2:1429610/244‑1 (MQ=255)
                                                                                                                                                                                                                      ggCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATc                                                                                                                         <  2:451969/226‑1 (MQ=255)
                                                                                                                                                                                                                          aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATAccc                                                                                                                                      >  2:860794/1‑209 (MQ=255)
                                                                                                                                                                                                                          aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGgc                                                      >  1:1238158/1‑289 (MQ=255)
                                                                                                                                                                                                                           tCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAtcgac                                                                                                                                                                                                                          >  1:2229252/1‑122 (MQ=255)
                                                                                                                                                                                                                             aaCATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCaaa                                                                                                                                                    <  2:221375/192‑1 (MQ=255)
                                                                                                                                                                                                                             aaCATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCgg                                                                                                                                   >  2:1290452/1‑209 (MQ=255)
                                                                                                                                                                                                                                 tcatAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGataa                                                                                                                             <  1:1880416/211‑1 (MQ=255)
                                                                                                                                                                                                                                         tGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCg                                       >  1:2125876/1‑289 (MQ=255)
                                                                                                                                                                                                                                         tGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCCCGAAAGTTACGCCg                                       >  2:528123/1‑289 (MQ=255)
                                                                                                                                                                                                                                          gccaccgccgacccAAGGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGa                                      <  2:1665720/277‑1 (MQ=255)
                                                                                                                                                                                                                                          gCCACCACCGAACCAATGCCGCGGACAAAGTTAGAAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGa                                      >  1:1055910/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aaCCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGaataaa                                                                                                                                           >  2:1040407/2‑178 (MQ=255)
                                                                                                                                                                                                                                                      ccAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccgacaac                           >  2:2582740/1‑281 (MQ=255)
                                                                                                                                                                                                                                                         aTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACaa                       >  1:729680/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cgcgGACAAAGTTAGCAAAGGTGGTTATCGAAGCCCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCa                    <  1:1739316/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCATAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatga                 >  1:942659/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAt                                                                                                                                                                              >  1:1130967/1‑133 (MQ=255)
                                                                                                                                                                                                                                                               cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAt                                                                                                                                                                              <  2:1130967/133‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtga           <  1:2306548/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaGTTAGCAAAGGTGGTTAGCGAAGACCCAGGAATGCTGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTAACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtga           <  2:729680/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCg                                                                                                                                    <  1:592355/167‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtgatgg        <  1:1642769/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ggCAAAGGTGGTTATCGAAGACCACGGAAGGATGTGATCCGCCCCGGTATCCTGTCGTACGCCCACGTAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATATTCACCAAAT‑CTACAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTa      <  2:1800915/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                            cAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATgatggtgatggt       >  1:1433674/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                            cAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGAGAGCCAGACCTAATGCCCCGGCACCTGCCAGCAAAGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACt    >  2:1630891/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              aaGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCCTACGACCACGGAGCGAATCTACTTCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGa  <  2:650753/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 gtggtTATCGAAGATCAGGGATAGATGGGTGACGCGCCGGCATCCTGTCGTACGCCAAAGGAGAGAAAGGACATCAGTGCCA‑CTGTGCGGGGCAACGGCCGGATAGTCACCAAAG‑CGCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATGTCTGTCACCAGCGTTTGCGAACCAAGCGAGATAGCCAGGCCTAATGCCCCGGCGCCTGCCAGCAATGGCGCGGTATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTAc     <  2:1904446/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 gtggtTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGTGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatg                  >  2:1099525/1‑270 (MQ=255)
                                                                                                                                                                                                                                                                                 gtggtTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGTGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatg                  <  1:1099525/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
GTTTTTTCACCTGGCTGTCGAGGGCAAAGCGTACCGTCCACTGTTTGAGTGGCAGCGTGGTGAAGCTAACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGC‑CCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGA  >  CP042583/706256‑706813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A