Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 706,596 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583706,5960GC99.5% 880.5 / NA 371intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (181/187);  minor base A (2/0);  total (183/188)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583706,5970CG99.7% 872.2 / NA 371intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (182/187);  total (183/188)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583706,5980TA99.7% 882.7 / NA 371intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (183/186);  minor base G (0/1);  total (183/188)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 371 total aligned reads displayed.

AACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTA  >  CP042583/706323‑706873
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                     
aaCACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAACGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑Ct                                                                                                                                                                                                                                                                         >  2:2462113/1‑289 (MQ=255)
         tgtAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCg                                                                                                                                                                                                                                                                                 <  1:856426/273‑1 (MQ=255)
           tAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGAATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCaa                                                                                                                                                                                                                                                              <  2:2577851/289‑1 (MQ=255)
                 cgGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCg                                                                                                                                                                                                                                                                                 <  1:2120681/265‑1 (MQ=255)
                 cgGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAACACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACTGACAGAACAGACATCAGTCCCA‑CTGTGCCGGTCAACGGcc                                                                                                                                                                                                                                                         >  2:1841551/1‑288 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGTCAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                                                                                      >  2:307014/1‑289 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTATCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                                                                                      >  2:2609730/1‑289 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCa                                                                                                                                                                                                                                                                            <  1:2188658/268‑1 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCgc                                                                                                                                                                                                                                                      >  1:1816495/1‑288 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGa                                                                                                                                                                                                                                                      >  2:2087772/1‑289 (MQ=255)
                   gTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACAAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGcccaa                                                                                                                                                                                                                                                      >  1:448252/1‑287 (MQ=255)
                       tGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAg                                                                                                                                                                                                                                                   >  2:1642769/1‑288 (MQ=255)
                              gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCaaa                                                                                                                                                                                                                                           >  1:1015396/1‑289 (MQ=255)
                              gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCaaa                                                                                                                                                                                                                                           >  2:2410416/1‑289 (MQ=255)
                              gCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCaaa                                                                                                                                                                                                                                           >  1:1587754/1‑289 (MQ=255)
                                   cAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTcc                                                                                                                                                                                                                                     >  1:1209756/1‑289 (MQ=255)
                                   cAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCCAATTTCTTCGTTTTCCATTAATTCCGCTACCGGATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTcc                                                                                                                                                                                                                                     <  2:838537/289‑1 (MQ=255)
                                              aaaTTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGc                                                                                                                                                                                                                          <  1:1078485/289‑1 (MQ=255)
                                                         aCCAGTAATCAGCCCTCTTATTTTTTCTTTTTCCAATAATTCCGCTACCGCATCTTTCAGTGCCTGATTCGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               <  2:434516/289‑1 (MQ=255)
                                                         aCCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               <  1:170214/289‑1 (MQ=255)
                                                         aCCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               <  1:358375/289‑1 (MQ=255)
                                                         aCCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               <  1:872768/289‑1 (MQ=255)
                                                                     cccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACTTCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCCCCAAAT‑CCCCAGTGTTCATGCCGTGTTCAAACTGAATAAATAc                                                                                                                                                                                                    >  2:2713781/1‑288 (MQ=255)
                                                                     cccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               >  2:380109/1‑277 (MQ=255)
                                                                     cccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATAc                                                                                                                                                                                                    >  1:1097655/1‑288 (MQ=255)
                                                                     cccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑ACCCATTGTTCATGCCGTCTTCAAACTGAAAAAATAc                                                                                                                                                                                                    >  2:1407572/1‑288 (MQ=255)
                                                                     cccGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGAC‑AAGGTAGCAAAGGTGGTTAACGAAGACCACCGAATTATGTTATACGCCCCGGTAACCTTTCGTTCGCCCACGGAGCCGATCCAACACCGTTCCACCTGTG‑CGGTCAACGGCCCCGTAAGCACCAAATCCCCCAGTGTCCA‑GCCCTTTTCAAACCTAAAAAAAAcc                                                                                                                                                                                                   >  2:122581/1‑288 (MQ=255)
                                                                         cgAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCTAGTGTTCATGCCGTTTTCAAACTGaaaaa                                                                                                                                                                                                        <  1:2585042/280‑1 (MQ=255)
                                                                               tcttcGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGataa                                                                                                                                                                                         <  1:1832331/289‑1 (MQ=255)
                                                                                                               tttCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCa                                                                                                                                                                                                                                             >  1:1984664/1‑206 (MQ=255)
                                                                                                                     tGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGataa                                                                                                                                                                                         >  2:1989155/1‑251 (MQ=255)
                                                                                                                     tGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGcc                                                                                                                                                   >  2:248829/1‑289 (MQ=255)
                                                                                                                      gCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTgcgaaccaa                                                                                                                                                              >  1:314325/1‑269 (MQ=255)
                                                                                                                           aTTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCt                                                                                                                                             >  2:1729567/1‑289 (MQ=255)
                                                                                                                               gCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCAc                                                                                                                                                                                                                                               <  2:1310016/188‑1 (MQ=255)
                                                                                                                               gCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTCCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACGGAATAAATACCCCGGTGAAAATATCTTTCACCAGCGTTTGCGAACCAAACGAGAAAGCAAGACCTAAt                                                                                                                                          >  2:2687961/1‑288 (MQ=255)
                                                                                                                                 tttATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGt                                                                                                                                                                                              >  1:71871/1‑234 (MQ=255)
                                                                                                                                    aTCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCg                                                                                                                                    >  1:1449254/1‑289 (MQ=255)
                                                                                                                                         cATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAg                                                                                                                                                                                                                                   >  2:1706980/1‑189 (MQ=255)
                                                                                                                                         cATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATAccc                                                                                                                                                                                                  >  1:748927/1‑222 (MQ=255)
                                                                                                                                         cATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAg                                                                                                                                                                            >  1:1429610/1‑244 (MQ=255)
                                                                                                                                          aTCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCAc                                                                                                                                <  1:482088/287‑1 (MQ=255)
                                                                                                                                                  ggCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCaa                                                                                                                      <  1:112166/289‑1 (MQ=255)
                                                                                                                                                  ggCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGGCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCaa                                                                                                                      <  2:2048306/289‑1 (MQ=255)
                                                                                                                                                      aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGgc                                                                                                                  >  1:1238158/1‑289 (MQ=255)
                                                                                                                                                      aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCG‑ATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCg                                                                                                                                                                                                <  1:1261313/210‑1 (MQ=255)
                                                                                                                                                      aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCG‑ATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCg                                                                                                                                                                                                >  2:1261313/1‑210 (MQ=255)
                                                                                                                                                         aaCATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCaaa                                                                                                                                                                                                                <  2:221375/192‑1 (MQ=255)
                                                                                                                                                              catAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATAtt                                                                                                          >  2:1451338/1‑289 (MQ=255)
                                                                                                                                                                tAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTg                                                                                                         >  1:1899642/1‑288 (MQ=255)
                                                                                                                                                                     tGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCa                                                                                                                                 >  1:626805/1‑259 (MQ=255)
                                                                                                                                                                     tGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCa                                                                                                                                 <  1:2148304/259‑1 (MQ=255)
                                                                                                                                                                     tGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCCCGAAAGTTACGCCg                                                                                                   >  2:528123/1‑289 (MQ=255)
                                                                                                                                                                      gccaccgccgacccAAGGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGa                                                                                                  <  2:1665720/277‑1 (MQ=255)
                                                                                                                                                                                     aTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccgacaacccaa                                                                                   >  1:2618725/1‑278 (MQ=255)
                                                                                                                                                                                      tGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTg                                                                                                                                                                                                             >  1:2316220/1‑166 (MQ=255)
                                                                                                                                                                                      tGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAAt                                                                                  <  2:1074245/289‑1 (MQ=255)
                                                                                                                                                                                         cgcgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCa                                                                                <  1:2410416/288‑1 (MQ=255)
                                                                                                                                                                                          gcgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatg                                                                              <  1:528123/289‑1 (MQ=255)
                                                                                                                                                                                                aaaGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtg                                                                        <  2:1238158/289‑1 (MQ=255)
                                                                                                                                                                                                 aaGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtga                                                                       <  1:2087772/289‑1 (MQ=255)
                                                                                                                                                                                                  aGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCg                                                                                                                                                                                                <  1:592355/167‑1 (MQ=255)
                                                                                                                                                                                                      aGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTa                                                                  <  1:969940/289‑1 (MQ=255)
                                                                                                                                                                                                      aGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTa                                                                  <  1:1729567/289‑1 (MQ=255)
                                                                                                                                                                                                        cAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATgatggtgatggt                                                                   >  2:1430710/1‑286 (MQ=255)
                                                                                                                                                                                                          aaGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGCGATAATCTCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGCGACTGACGCCGATTTCCGACCACACACTCACAAGGGTGATGTGACTGa                                                              >  2:1607654/1‑289 (MQ=255)
                                                                                                                                                                                                             gtggtTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGTGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatg                                                                              >  2:1099525/1‑270 (MQ=255)
                                                                                                                                                                                                                gttatcgaaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTcc                                                                                             >  1:194902/9‑251 (MQ=255)
                                                                                                                                                                                                                   atcgaaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAAACAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCat                                                                               >  1:246192/6‑263 (MQ=255)
                                                                                                                                                                                                                       aaGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGGGCTGGTACTGAAAATAAccacca                                                  >  2:1899672/2‑288 (MQ=255)
                                                                                                                                                                                                                          aCCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTccga                                                                                           <  2:1946914/244‑4 (MQ=255)
                                                                                                                                                                                                                          aCCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATATTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATCTCCGACAACACAATCATGATGGCGATGGTACTGATAATCACCGCCAgcgc                                              >  1:2474857/1‑289 (MQ=255)
                                                                                                                                                                                                                          aCCACGGAATGAGGCGCTACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCGTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGAAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                               <  2:2132747/288‑1 (MQ=255)
                                                                                                                                                                                                                              cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCATCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAATATGGTGATGGTACTTATAATCAACACCACcgcggt                                           >  1:1777509/1‑286 (MQ=255)
                                                                                                                                                                                                                              cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                            <  2:354245/255‑1 (MQ=255)
                                                                                                                                                                                                                              cGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGtt                                           >  2:479440/1‑288 (MQ=255)
                                                                                                                                                                                                                                   tgatgTGATACGCCTCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaaa                                     <  2:703012/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tgtgATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                      >  1:1352462/1‑285 (MQ=255)
                                                                                                                                                                                                                                      tgtgATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACATAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATaag                                                          >  1:1844034/1‑264 (MQ=255)
                                                                                                                                                                                                                                           tACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGTCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtg                                                                        <  2:1561516/246‑1 (MQ=255)
                                                                                                                                                                                                                                           tACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTaa                             >  2:741100/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCACTGGCCCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                            >  2:2327295/1‑288 (MQ=255)
                                                                                                                                                                                                                                              gCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                          <  1:1309252/289‑1 (MQ=255)
                                                                                                                                                                                                                                                cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTc                                                                                                                                                                                                                                                 >  2:622001/1‑73 (MQ=255)
                                                                                                                                                                                                                                                cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGa                                                                                                  <  2:1822993/215‑1 (MQ=255)
                                                                                                                                                                                                                                                cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtga                                                                       <  2:877574/242‑1 (MQ=255)
                                                                                                                                                                                                                                                   ggTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTGTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCCATGGCGCGATATTGACGCCGATTTCCGACAACACAACCATTATGGTGACGGTACTGATAATCAACGCCAGCGCGTTACGAAACAGCGTACGCAGGGt                      >  2:226373/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     tATCCTGTCGTACGCCCACGGAGCGAATCGGCATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTAcg                   <  1:343576/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       tCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCa                                                                                                                                 <  1:1637144/177‑1 (MQ=255)
                                                                                                                                                                                                                                                         cTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                            >  2:105230/1‑228 (MQ=255)
                                                                                                                                                                                                                                                         cTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                            <  1:105230/228‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACCACACAATCACGATGGTTATGGTACTTATAATCAACGCCATCGCGTCACGAAACAGCGTAGACAGGGTAagcggtc              >  2:1743750/1‑286 (MQ=255)
                                                                                                                                                                                                                                                          tGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATCGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGc              >  1:2699814/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            tCGGACGCCCACGGAGCGCATCGACAGCCTGTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCgg            <  2:1131603/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               tACGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                      <  2:564561/260‑1 (MQ=255)
                                                                                                                                                                                                                                                                aCGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgcgc        <  1:2037705/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAAc                                                                                                                                                                                                               >  1:296908/1‑89 (MQ=255)
                                                                                                                                                                                                                                                                 cGCCCACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                               <  1:2241354/249‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cccACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGCAACAGCGTAAGCAGGGTACGCGTGCGGgc          >  2:1496316/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                   cccACGGAGCGAATCGACATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCGAACCAAACGAGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgc          <  1:1496316/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                     
AACACGCAGTGTAAACGCGGTATTGCTTAAGCCGACAATCCCGGCAAAATTCGGTTCACCAATAATCAGCCCGCGAATTTCTTCGTTTTCCATTAATTCCGCTACCGCATCTTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCA‑CTGTGCCGGTCAACGGCCCGATAGTCACCAAAT‑CTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGCTACCAAAGCTGATAGCCAGACCTAATGCCCCGGCACCTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTA  >  CP042583/706323‑706873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A