Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 764,363 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583764,3630GC99.5% 845.8 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (182/178);  minor base A (1/1);  total (183/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583764,3640CG99.7% 851.0 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (182/179);  total (183/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583764,3650TA99.7% 860.3 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (182/180);  minor base C (1/0);  total (183/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

CACGAATTGCACCGTAAAACAGCTGCGTGGTATACGCCGCACTATTCAGGCTCAACGCAATCAGCGCACATAACCACGGTTCACTCAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGGCTGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCA  >  CP042583/764083‑764640
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                   
         cACCGTAAAACAGCTGCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCg                                                                                                                                                                                                                                                                       <  2:1171739/288‑1 (MQ=255)
          aCCGTAAAACAGCTGCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGt                                                                                                                                                                                                                                                                      <  1:1401331/288‑1 (MQ=255)
              tAAAACAGCTGCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAg                                                                                                                                                                                                                                                                   >  1:1471514/1‑287 (MQ=255)
                acaCAGCTGCCTGGTATCAGCCGACCTATTCCGCGACAACGCAATCCGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTg                                                                                                                                                                                                                                                               <  2:50245/287‑1 (MQ=255)
                aaaCAGCTGCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTg                                                                                                                                                                                                                                                               <  1:124314/289‑1 (MQ=255)
                      cTGCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGgtgtgt                                                                                                                                                                                                                                                         >  1:1763314/1‑289 (MQ=255)
                        gCGTGGTATACGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAACCAGTGCCACAATCAGCGAGGCAACGGTTAGCGGCAGGCTGGTGCGTa                                                                                                                                                                                                                                                        >  2:76772/1‑288 (MQ=255)
                                 aCGCCGCACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCGACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTtcat                                                                                                                                                                                                                                              <  2:218345/289‑1 (MQ=255)
                                   gccgcACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTtcatca                                                                                                                                                                                                                                            >  2:328851/1‑289 (MQ=255)
                                       cACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTTCCTGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGAGGCGTACCGGGTAAACAGCGTTATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGtt                                                                                                                                                                                                                                         <  1:1059698/289‑1 (MQ=255)
                                       cACTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGAAACGGTTAGCGTCAGGCTGGTGGGTCGCCCTTTCATCAGtt                                                                                                                                                                                                                                         >  2:866203/1‑288 (MQ=255)
                                       cACCATTCAGGGACACCGCACTCAGCTCACATAACCACGGTTCGGACAACAAATGCCACAGTGCGGGAGACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAAGCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGtt                                                                                                                                                                                                                                         <  2:2037414/288‑1 (MQ=255)
                                        aCTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGc                                                                                                                                                                                                                                                                 <  2:1713083/263‑1 (MQ=255)
                                        aCTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCg                                                                                                                                                                                                                                       >  1:2142033/1‑289 (MQ=255)
                                        aCTATTCAGCGACAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCg                                                                                                                                                                                                                                       >  2:453319/1‑289 (MQ=255)
                                               agcgacAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTaa                                                                                                                                                                                                                                  >  1:1366213/6‑287 (MQ=255)
                                               agcgacAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGAACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCGGTGCCACAATCAGCGAGGCAACGCTTAGCGTCAGGATGGTGGGTAGCACTTTCATCAGTTCGGGTAAAt                                                                                                                                                                                                                                >  2:1757272/6‑289 (MQ=255)
                                                    cAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCTAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTc                                                                                                                                                                                                                            <  1:1703861/288‑1 (MQ=255)
                                                    cAACGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCa                                                                                                                                                                                                                           >  1:1314864/1‑289 (MQ=255)
                                                      aCGCAATCAGCGCACATAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCaa                                                                                                                                                                                                                          >  1:1219383/1‑288 (MQ=255)
                                                        gCAATCAGCGCACATACCCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACa                                                                                                                                                                                                                       <  1:2124917/289‑1 (MQ=255)
                                                                     aTAACCACGGTTCTGACAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTc                                                                                                                                                                                                          <  1:189455/289‑1 (MQ=255)
                                                                      tAACCACCGTTCTGACAACAAATGCCCCAGTGCCGGATACTCCTGCAAAGTCGGCAACCGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTcc                                                                                                                                                                                                         <  1:883479/289‑1 (MQ=255)
                                                                                tctgacaacaaATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCGGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAAc                                                                                                                                                                                                <  1:2346253/283‑1 (MQ=255)
                                                                                    acaacaaATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTc                                                                                                                                                                                           <  2:1065046/288‑1 (MQ=255)
                                                                                    acaacaaATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAAATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTc                                                                                                                                                                                           <  1:2022026/288‑1 (MQ=255)
                                                                                                acaGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCa                                                                                                                                                                               <  1:453319/289‑1 (MQ=255)
                                                                                                    tGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATg                                                                                                                                                                            <  2:2709543/288‑1 (MQ=255)
                                                                                                     gCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCaa                                                                                                                                                                              <  1:830790/285‑1 (MQ=255)
                                                                                                       ccgATACTCCTACAAACGCGGAAACTTGGCCGGCCCGAAATAAATCAAGAAGATCTGCCCCAGCAGCGGCATACC‑AGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGtt                                                                                                                                                                        <  2:958300/287‑1 (MQ=255)
                                                                                                       cGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGGCAATGCGtt                                                                                                                                                                        >  2:2409514/1‑289 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCCGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTGGAGAAt                                                                                                                                                                 >  2:1669313/1‑289 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAAt                                                                                                                                                                             >  1:1087305/1‑277 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATg                                                                                                                                                                            >  1:2161089/1‑278 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAAt                                                                                                                                                                 >  1:622812/1‑289 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAAt                                                                                                                                                                 >  1:1590969/1‑289 (MQ=255)
                                                                                                              tCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTAAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAAt                                                                                                                                                                 >  2:1235727/1‑289 (MQ=255)
                                                                                                                cTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGgtgtg                                                                                                                                                                                                                                                          <  1:1193494/198‑1 (MQ=255)
                                                                                                                cTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGgtgtg                                                                                                                                                                                                                                                          >  2:1193494/1‑198 (MQ=255)
                                                                                                                 tGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTa                                                                                                                                                              <  1:2409514/289‑1 (MQ=255)
                                                                                                                   cAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCCCAAAACGTGTCGCTCGCAGGTCAATGCGGTTGAGAACGTcct                                                                                                                                                            >  2:1733071/1‑289 (MQ=255)
                                                                                                                        tCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACAtt                                                                                                                                                                                                                     <  2:1118199/227‑1 (MQ=255)
                                                                                                                        tCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTactgactg                                                                                                                                                       >  1:1002490/1‑289 (MQ=255)
                                                                                                                        tCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGGTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTactgact                                                                                                                                                        >  2:2154315/1‑288 (MQ=255)
                                                                                                                          ggAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAg                                                                                                                                                     <  1:163856/289‑1 (MQ=255)
                                                                                                                            aaaCTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGc                                                                                                                                                    <  1:2206381/288‑1 (MQ=255)
                                                                                                                                             aataaATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCa                                                                                                                                                   <  1:2063583/272‑1 (MQ=255)
                                                                                                                                                      ggAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATcgccgcc                                                                                                                         >  1:2738007/1‑289 (MQ=255)
                                                                                                                                                       gAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGACTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGGTTGATATTGGACTTACTGAGCAGGGTGAGCACCCGGtctcgtataacaa                                                                                                                        >  2:2063583/1‑277 (MQ=255)
                                                                                                                                                            tCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCcaca                                                                                                                   <  1:862670/289‑1 (MQ=255)
                                                                                                                                                                      cagcGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGCTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGCATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGTTAAATCGCCGCCGCCACAACGTACCAgg                                                                                                         >  2:2000669/1‑289 (MQ=255)
                                                                                                                                                                                cc‑GATAAACAGCGTGATATAACCCCACACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTc                                                                                               <  1:355408/289‑1 (MQ=255)
                                                                                                                                                                                 c‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTa                                                                                                                                                                                                                                   <  2:2479136/156‑1 (MQ=255)
                                                                                                                                                                                 c‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTa                                                                                                                                                                                                                                   >  1:2479136/1‑156 (MQ=255)
                                                                                                                                                                                 c‑GGAAAACCGCTGGATCTAACCCCCCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAAGGCCAGAATCGGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTcc                                                                                              <  2:727650/289‑1 (MQ=255)
                                                                                                                                                                                    gTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATcgccgc                                                                                                                          <  2:1512970/259‑1 (MQ=255)
                                                                                                                                                                                      aaaCAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGtt                                                                                                                                                                        >  2:615555/1‑211 (MQ=255)
                                                                                                                                                                                       aaCAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGt                                                                                         >  1:1568016/1‑289 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCt                                                                                                                                                                                                           <  1:1853254/170‑1 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCt                                                                                                                                                                                                           >  2:1853254/1‑170 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTc                                                                                                                                                                                                          <  2:1599953/171‑1 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAg                                                                                    >  2:2570004/1‑289 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGATTCCTGTGTACGAg                                                                                    >  2:2370732/1‑289 (MQ=255)
                                                                                                                                                                                            cGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTCTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTCCCAGGTCAAGGGTTCCTGGGTACGAg                                                                                    >  2:2687678/1‑289 (MQ=255)
                                                                                                                                                                                              tGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTa                                                                                                              >  2:1211906/1‑261 (MQ=255)
                                                                                                                                                                                                        ccGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTcgcgc                                                                                                                                                                                       <  2:1786403/178‑1 (MQ=255)
                                                                                                                                                                                                         cGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCttgt                                                                       >  2:1477494/1‑287 (MQ=255)
                                                                                                                                                                                                         cGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCCCCGCCGCCACAATTTACCAGGTAAATGGTTCCTGGGGTCGAGTCGCGATGCcttt                                                                       >  2:1005230/1‑289 (MQ=255)
                                                                                                                                                                                                          gCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCcaca                                                                                                                   <  2:2664524/244‑1 (MQ=255)
                                                                                                                                                                                                          gCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCcaca                                                                                                                   >  1:2664524/1‑244 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACCATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGCTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGCACCAGGTAACTGGCTCCTGGGTACGACTAGCGATGCTTtttg                                                                     >  2:923239/1‑289 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGTCCTCCGCTCAAAACGTGTCGCGCGCAGGGCAATGCGTTTGAGAATCTACTGACTGAGCAGGGTGATCACCAGGTCAAACGCCGCCGCCACAATGTACCAGGTAAATGGTTGCTGGGTACGAGAAGCGATGCTTtttg                                                                     >  1:1750946/1‑289 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTg                                                                                                                                              <  1:1729616/216‑1 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCcaca                                                                                                                   >  1:96473/1‑243 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTaaa                                                                                                     <  1:2252668/257‑1 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGt                                                                                         >  1:2462947/1‑269 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGt                                                                                         <  2:2462947/269‑1 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTtttg                                                                     >  1:2697114/1‑289 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTtttg                                                                     >  1:705319/1‑289 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCACCGCTCAAAACGTGTCgcgcgc                                                                                                                                                                                     >  2:1390895/1‑177 (MQ=255)
                                                                                                                                                                                                           cACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGGCAGGCTGGTGAGTAGCCCGTTCCTCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGAGCGCAGGCCAATGCGTTTGAGAATGTACTGACTGAGCAGCGTGAACACCAGGTAAATCGCCGCCGCCACAATGTACCACGTCAATGGTTCCTGGGTACTATGAGCCATGCttttgg                                                                     >  2:2124278/1‑287 (MQ=255)
                                                                                                                                                                                                                gCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTactga                                                                                                                                                          >  1:1019030/1‑199 (MQ=255)
                                                                                                                                                                                                                gCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTgc                                                                >  1:606028/1‑289 (MQ=255)
                                                                                                                                                                                                                gCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTgc                                                                >  2:1017578/1‑289 (MQ=255)
                                                                                                                                                                                                                gCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGCGTCGCGCGCCGGTCAATGCGTTTGAGAAGGTACCGACTGAGGAGGGGGATCACCAGGTAAAACGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGCACGAGTAGCGATGCTTTttgcttgc                                                                >  1:2316200/1‑289 (MQ=255)
                                                                                                                                                                                                                  cacaCCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTtttgtttg                                                                 <  1:1503332/286‑1 (MQ=255)
                                                                                                                                                                                                                           aCCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTaa                                                        <  1:1149037/286‑1 (MQ=255)
                                                                                                                                                                                                                           aCCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTaa                                                        <  1:1796228/286‑1 (MQ=255)
                                                                                                                                                                                                                              ggCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCCCAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCAtt                                                  <  2:109148/289‑1 (MQ=255)
                                                                                                                                                                                                                               gCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTactga                                                                                                                                                          >  1:1980561/1‑184 (MQ=255)
                                                                                                                                                                                                                               gCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTCCGATTAGCCGTCCTGTTTGTCTGCACCATTAACTCAtt                                                  >  2:2206635/1‑288 (MQ=255)
                                                                                                                                                                                                                               gCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTGCCAGCATTAAACCAtt                                                  >  2:2086058/1‑288 (MQ=255)
                                                                                                                                                                                                                                         cGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTa                                                                                                                                                                                                                                                        <  1:2574690/80‑1 (MQ=255)
                                                                                                                                                                                                                                                 tgatgGTAAAAAGCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTGTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGAc                                <  1:557692/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       tAAAAATCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTaa                                                        >  2:854568/1‑258 (MQ=255)
                                                                                                                                                                                                                                                         aaaaTCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGc                                                                                                                                                    >  2:565598/1‑164 (MQ=255)
                                                                                                                                                                                                                                                         aaaaTCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGc                                                                                                                                                    >  2:226662/1‑164 (MQ=255)
                                                                                                                                                                                                                                                         aaaaTCAATGCCAGAATCAGTGCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGt                       >  1:1686828/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGcc   <  2:1314864/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gCCACAATCAGCGAGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGcc   <  2:1568016/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                   
CACGAATTGCACCGTAAAACAGCTGCGTGGTATACGCCGCACTATTCAGGCTCAACGCAATCAGCGCACATAACCACGGTTCACTCAACAAATGCCACAGTGCCGGATACTCCTGCAAAGTCGGAAACTGGCCCGGCCCGTAATAAATCAGGAAGATCTGCACCAGCAGCGGCGTACC‑GGTAAACAGCGTGATATAACCCCGCACCAGCCACACCAGCACCGGCGTTTTCAGCGTCAGGATGATGGTAAAAATCAATGCCAGAATCAGTGCCACAATCAGGCTGGCAACGGTTAGCGTCAGGCTGGTGTGTAGCCCTTTCATCAGTTCGGGTAAATACTCAAACATTAGCTGGGCCTCCGCTCAAAACGTGTCGCGCGCAGGTCAATGCGTTTGAGAATGTACTGACTGAGCAGGGTGATCACCAGGTAAATCGCCGCCGCCACAATGTACCAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCA  >  CP042583/764083‑764640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A