Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 764,809 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583764,8090AT99.3% 670.3 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (133/150);  minor base C (2/0);  total (136/152)
Fisher's exact test for biased strand distribution p-value = 2.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583764,8100CG99.3% 679.1 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (134/152);  minor base T (2/0);  total (136/152)
Fisher's exact test for biased strand distribution p-value = 2.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583764,8110TA99.7% 681.3 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (135/151);  minor base G (0/1);  total (136/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 288 total aligned reads displayed.

CAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CGCTTTTGC‑TCAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGGCTGGCATAGGCGGCATACAGCAGACTCAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCGCTAAGCGTCAGCAGCAGCTGGCTGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCACTACCTGCCCACGCGACAGGACGCCATTTTGCGCTCTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAA  >  CP042583/764534‑765088
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
cAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGa                                                                                                                                                                                                                                                                            <  2:1029092/289‑1 (MQ=255)
cAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGa                                                                                                                                                                                                                                                                            <  1:164251/289‑1 (MQ=255)
  ggTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGCTTTCG‑‑ACAGCCCCAGCGCCTGACCAGCCTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTCTGCGAGGCATCGCCGGCAAACAGCAGTGACCGAGCGCTGac                                                                                                                                                                                                                                                                           >  2:1941040/1‑288 (MQ=255)
  ggTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCCCCGGCACCGCTTTCAACGCGCCCCGAAGCGTTGGCGAGGCATAGGCGGCATACAGCAGTTACAGAGCgacgac                                                                                                                                                                                                                                                                           >  2:432858/1‑288 (MQ=255)
    tAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGacac                                                                                                                                                                                                                                                                         <  2:113866/288‑1 (MQ=255)
     aaaTGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGACCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGAcacc                                                                                                                                                                                                                                                                        >  2:1081655/1‑288 (MQ=255)
       aTGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACcaca                                                                                                                                                                                                                                                                     <  1:2687678/289‑1 (MQ=255)
       aTGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCCTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACcaca                                                                                                                                                                                                                                                                     >  1:1474783/1‑289 (MQ=255)
       aTGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACCGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACcaca                                                                                                                                                                                                                                                                     >  1:1036028/1‑289 (MQ=255)
        tGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCACACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACaa                                                                                                                                                                                                                                                                    <  1:642842/289‑1 (MQ=255)
            tCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCCCCCCGAAGCGTTTGCGAGGCATAGGCTGCATACAGCAGTGACAGCGCGAGGACACCCCAAAGGa                                                                                                                                                                                                                                                                >  2:2431843/1‑289 (MQ=255)
             ccggggTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑ACAGGCAGCGCATGACGCCACATCTGCGGCATCACCCGACGGAAACAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGCTTGCGCGGCATAGGCGGCACACAGCAGCGACTGACCGAGCACACCGAAAAGGaa                                                                                                                                                                                                                                                               >  2:2379433/4‑289 (MQ=255)
             ccTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGac                                                                                                                                                                                                                                                               >  2:2343454/1‑288 (MQ=255)
             ccTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGa                                                                                                                                                                                                                                                                >  1:1714411/1‑288 (MQ=255)
                     cGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCATACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTCCGAGGCATAGGCGGCATACAGCAGTTACAGAGCGATGACACCACAAAgcagacggcta                                                                                                                                                                                                                                                        >  2:1118294/1‑278 (MQ=255)
                           gCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGa                                                                                                                                                                                                                                                 >  2:944000/1‑289 (MQ=255)
                                      tgtttgCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATg                                                                                                                                                                                                                                      <  1:2357433/289‑1 (MQ=255)
                                         ttgCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTc                                                                                                                                                                                                                                    <  2:1748783/288‑1 (MQ=255)
                                          tgCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCa                                                                                                                                                                                                                                  >  2:1341203/1‑289 (MQ=255)
                                           gcagcaTTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGACGTTCTCCATggcaa                                                                                                                                                                                                                                  >  2:1323259/1‑284 (MQ=255)
                                           gcagcaTTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCAt                                                                                                                                                                                                                                 <  1:2304890/289‑1 (MQ=255)
                                                  tAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCCCCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACt                                                                                                                                                                                                                          <  1:923239/289‑1 (MQ=255)
                                                  tAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGc                                                                                                                                                                                                                             >  1:842073/1‑286 (MQ=255)
                                                  tAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACt                                                                                                                                                                                                                          <  1:997891/289‑1 (MQ=255)
                                                         ttCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGaca                                                                                                                                                                                                                                                                          <  1:551550/234‑1 (MQ=255)
                                                         ttCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAATGAACGGGCTAACGCCGAAGTTCTCAATGTCCATCTGCACTGGGa                                                                                                                                                                                                                      >  1:2135320/1‑286 (MQ=255)
                                                         ttCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGa                                                                                                                                                                                                                      >  1:1421987/1‑286 (MQ=255)
                                                         ttCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGa                                                                                                                                                                                                                      >  2:1296151/1‑286 (MQ=255)
                                                             cacccatacaaCTGACCAGCGCGGTATCTGTCAGCAGCACCAGCCACTGGTTAGCGAGG‑CCAGGCAGCGCATGGCGCCACATCTGCGGCATACCCAGACGGAAAAAGATAG‑CCGATTTCG‑ACGGCCCCAGCGCCTGACCGGAGTCCCACTGACCCACCGGCACCGCGTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCAc                                                                                                                                                                                                               <  2:1474783/280‑1 (MQ=255)
                                                              acTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACg                                                                                                                                                                                                              <  2:2395889/289‑1 (MQ=255)
                                                                  aTCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGAt                                                                                                                                                                                                                                                                              >  1:107268/1‑221 (MQ=255)
                                                                        cTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTATCAATGTCCATCTGCCCTGGGATCTGCACGAACCCAAGAt                                                                                                                                                                                                    >  1:1214257/1‑289 (MQ=255)
                                                                        cTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCAGGACGACACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGAt                                                                                                                                                                                                    <  1:426319/289‑1 (MQ=255)
                                                                          gACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCCGCGCCTGACCAGACCCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGCTTGCGAGGCATAGGCGGCAAGCAGCAGTGACAGAGCGAGGACACCACAAAGGAACGGGCTAACGTCGAAGTTCAGAATGTCCATCTGCACTAGGATCTGCACACACCCacgctct                                                                                                                                                                                                  >  2:1496870/1‑283 (MQ=255)
                                                                                cgcgGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATg                                                                                                                                                                                                                                      <  2:444682/247‑1 (MQ=255)
                                                                                cgcgGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATg                                                                                                                                                                                                                                      >  1:444682/1‑247 (MQ=255)
                                                                                cgcgGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTg                                                                                                                                                                                            >  2:263494/1‑289 (MQ=255)
                                                                                     tATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGcc                                                                                                                                                                                       >  2:170811/1‑289 (MQ=255)
                                                                                          ttCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCt                                                                                                                                                                                                                               <  2:1056775/244‑1 (MQ=255)
                                                                                          ttCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACt                                                                                                                                                                                                                          <  1:2524120/249‑1 (MQ=255)
                                                                                          ttCACCAGCCCCAGCCACGGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATccg                                                                                                                                                                                  <  2:555364/289‑3 (MQ=255)
                                                                                                 gcaCCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGc                                                                                                                                                                                                                                                          >  2:1783674/1‑210 (MQ=255)
                                                                                                 gcaCCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGc                                                                                                                                                                                                                                                          <  1:1783674/210‑1 (MQ=255)
                                                                                                 gcaCCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGAt                                                                                                                                                                                                                     >  1:1168046/1‑247 (MQ=255)
                                                                                                     cAGCCACTGTTCACCGAGGCCCACGC‑GCCCAGCACCCCACATCCGCGGCAACACCAGACCAAAAAAGACA‑‑CCCGATTGCGACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTcagc                                                                                                                                                                       <  2:286246/289‑1 (MQ=255)
                                                                                                       gCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTcagca                                                                                                                                                                      >  2:639722/1‑288 (MQ=255)
                                                                                                       cccACTGGTCACCGGGC‑CCGGGCAGCGCAGGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATGG‑CCGATTTCG‑ACCGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTcagcag                                                                                                                                                                     <  2:1412345/288‑1 (MQ=255)
                                                                                                         cattGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCCGCGCCTGACCAGACTCCCCCTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTcagca                                                                                                                                                                      <  1:2379433/283‑1 (MQ=255)
                                                                                                           cTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCGGCGGCATCACCAGACGGAAAAAGATAG‑CCCATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCagcagcagc                                                                                                                                                                 <  1:1534104/289‑1 (MQ=255)
                                                                                                                         ccAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCAt                                                                                                                                                                                                                                 >  2:76679/1‑212 (MQ=255)
                                                                                                                         ccAGGCAGCGCATGACGCCACATCGGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCaa                                                                                                                                                    <  1:2100811/289‑1 (MQ=255)
                                                                                                                               aGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACGGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAg                                                                                                                                               <  1:384561/288‑1 (MQ=255)
                                                                                                                                 cgcATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCAt                                                                                                                                                                                                                                 <  1:1116664/204‑1 (MQ=255)
                                                                                                                                  gcATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGa                                                                                                                                              <  1:499365/286‑1 (MQ=255)
                                                                                                                                    aTGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATaaa                                                                                                                                          <  1:1498973/288‑1 (MQ=255)
                                                                                                                                           cacaTCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAGGCGTTTGCGAGGCATAGGCGGCAGACAGCAGTGACAGACCGATGACACCACAAAGGAACGGCCTACCGTCGAAGTTCTCAATGTCCAACTGCACTGGCATCCGCATGAACCCAAGCTTAATAGTGCAGCCAGCCTAAAGCGTCACACGCACATGCGAGGACCCAAAATCGATAAACAGcacc                                                                                                                                   >  2:363604/1‑288 (MQ=255)
                                                                                                                                           cacaTCTGCGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGACAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGcacc                                                                                                                                   >  1:979406/1‑288 (MQ=255)
                                                                                                                                              aTCTGCGGCATCCCCAGACGGAAAAAGATAG‑CCGATTTCG‑ACACCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCAccacca                                                                                                                               <  1:1120995/289‑1 (MQ=255)
                                                                                                                                              aTCTGCGGCATCACCAGACGGAAAAGGCTAG‑CCGATCTCG‑ACAGCCCCAGCGCCTGACCATACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGACGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCAccacca                                                                                                                               <  2:1225049/289‑1 (MQ=255)
                                                                                                                                                   cGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCCCGAACCCAAGATTGATAGTTAAGCCATCCGAAAGCGTCAGCAGCCGCTGCCAGGAGCCAAAATAGATAAACAGcaccacaaacatt                                                                                                                          >  2:917799/1‑282 (MQ=255)
                                                                                                                                                   cGGCATCACCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAAAAGAGAAACAGCACCCCCAGAAtt                                                                                                                          >  2:862685/1‑289 (MQ=255)
                                                                                                                                                         cACCAGACGGAAAAAGAGAG‑C‑CGAGTGCGACGGCCCCAGCGCCTGACCAGACTCCCACTAACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGc                                                                                                                    <  2:2557991/289‑1 (MQ=255)
                                                                                                                                                          aCCAGACGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAAccc                                                                                                                                                                                                         >  1:225126/1‑203 (MQ=255)
                                                                                                                                                               aCGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGTCTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGcc                                                                                                               >  1:324740/1‑288 (MQ=255)
                                                                                                                                                               aCGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGa                                                                                                                                                                                                             >  1:2377478/1‑194 (MQ=255)
                                                                                                                                                                cGGAAAAAGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGcc                                                                                                               <  1:263494/287‑1 (MQ=255)
                                                                                                                                                                   aaaaaGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCa                                                                                                          >  2:2232387/1‑289 (MQ=255)
                                                                                                                                                                    aaaaGATAG‑CCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGAGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCa                                                                                                          <  2:1396671/288‑1 (MQ=255)
                                                                                                                                                                                cgctgtccacAGCCGCAGCGCCGGCCCAGAGTCCCCCAGACCCCCCGGCCCCGCTGTCAACGCGCCCAGAAGCGTTTGCGAGGCATAGGCGGCATACAGCATTGACAGAGCGATGACACCACAAAGGCACGGGCTAACGTCGAAGCTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCATGATTGATAGTGAAGCCATCCGAAAGCGTCACCAGCAGCTGCAAGGTGCCAAAATAGATCAACAGCACCACCAGAATTTCTGGCGGGCCACGCAGAATGGTTAc                                                                                                <  2:1982957/279‑1 (MQ=255)
                                                                                                                                                                                cgagttcgacAGCCCCAGCGCCTGACCCGACTCCCACTGACCCACCGGCACCGCTGTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTAc                                                                                                <  1:1085756/279‑1 (MQ=255)
                                                                                                                                                                                            ccccAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCCCGAACCCAAGATTGATAGTTACGCCATCCGAAAGCGTCAGCAGCAGCGGCGAGGAGCCAAAATAGGTAAACAGAACCACCCGAATTTCTGCGTGGCCACGCAGACTGGCAACCAgcgctgaca                                                                                     >  2:584530/1‑282 (MQ=255)
                                                                                                                                                                                                      tGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCAcgcg                                                                          >  1:1911584/1‑288 (MQ=255)
                                                                                                                                                                                                                  cACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCa                                                                                                          >  2:2036512/1‑244 (MQ=255)
                                                                                                                                                                                                                    cTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCAtttt                                                           >  1:1614711/1‑289 (MQ=255)
                                                                                                                                                                                                                       aCCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        >  2:814628/1‑288 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCATCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:2403985/288‑2 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCACCGCTTTCACCGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:808976/288‑2 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCACCGCTTTCACCGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:2533196/288‑2 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:1296151/288‑2 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:1758525/288‑2 (MQ=255)
                                                                                                                                                                                                                        cccACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        <  1:2086058/288‑2 (MQ=255)
                                                                                                                                                                                                                           aCCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCCGCACTGCGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGACAAACAGCACCACCAGAATTTCAGGCAGGCCACCCAGAATGGTTACCAGCGCAGAACCTGCCCACGCGACAGGACGCCATTCTgccgaa                                                     >  2:2262891/1‑284 (MQ=255)
                                                                                                                                                                                                                            ccGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATccg                                                                                                                                                                                  <  1:1322532/162‑3 (MQ=255)
                                                                                                                                                                                                                                cACCGCTTTCAACGCGCCCGGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCa                                                <  2:2060315/288‑1 (MQ=255)
                                                                                                                                                                                                                                   cGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                        >  1:1957904/1‑276 (MQ=255)
                                                                                                                                                                                                                                     cTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCg                                           >  2:2121192/1‑288 (MQ=255)
                                                                                                                                                                                                                                             gcgcCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAAc                                   <  2:975349/288‑1 (MQ=255)
                                                                                                                                                                                                                                                ccccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTtct                                                                                                                                                                                                                                           >  1:1024586/1‑85 (MQ=255)
                                                                                                                                                                                                                                                ccccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCAc                                                                                                                                                                                                               >  2:1674592/1‑113 (MQ=255)
                                                                                                                                                                                                                                                ccccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCAc                                                                                                                                                                                                               <  1:1674592/113‑1 (MQ=255)
                                                                                                                                                                                                                                                ccccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACg                                                                                                            >  2:1618803/1‑212 (MQ=255)
                                                                                                                                                                                                                                                ccccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACg                                                                                                            <  1:1618803/212‑1 (MQ=255)
                                                                                                                                                                                                                                                  ccGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATcgcc                             <  1:862685/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        cgtttgcgaggcCTAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATcgccagcgc                        <  1:759256/279‑1 (MQ=255)
                                                                                                                                                                                                                                                           ttgcgaggcATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCgccagcgccagc                    <  1:1485416/283‑1 (MQ=255)
                                                                                                                                                                                                                                                             gcgaggcATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGccc                  <  1:948296/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gcggcATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGCCGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGAcaatcaat        >  1:13743/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gcATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGcac    >  1:2047866/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            cATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCaa                                                                                                                                                    >  2:1517650/1‑144 (MQ=255)
                                                                                                                                                                                                                                                                            cATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAAAGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACAACGCCAGCGCCAGCCCGACAATCAATGcaca   >  1:2164980/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
CAGGTAAATGGTTCCTGGGTACGAGTAGCGATGCTTTTTGTTTGCAGCATTAAATCATTCACACTAATCAAACTGACCAGCGCGGTATCTTTCAGCAGCACCAGCCACTGGTTACCGAGG‑CCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAG‑CGCTTTTGC‑TCAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGGCTGGCATAGGCGGCATACAGCAGACTCAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCGCTAAGCGTCAGCAGCAGCTGGCTGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCACTACCTGCCCACGCGACAGGACGCCATTTTGCGCTCTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAA  >  CP042583/764534‑765088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A