Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 764,911 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583764,9110GC99.7% 700.1 / ‑5.1 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (156/139);  minor base . (1/0);  total (157/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583764,9120CG99.3% 691.7 / NA 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (154/139);  total (157/139)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583764,9130TA99.7% 696.7 / NA 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (156/137);  total (157/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 296 total aligned reads displayed.

CACCAGCCACTGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCGCTTTTGC‑TCAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGGCTGGCATAGGCGGCATACAGCAGACTCAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCGCTA‑AGCGTCAGCAGCAGCTGGCTGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCACTACCTGCCCACGCGACAGGACGCCATTTTGCGCTCTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGTAAGTG  >  CP042583/764632‑765190
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
caCCAGCCACTGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTc                                                                                                                                                                                                                                                                                >  1:511902/1‑289 (MQ=255)
     gCCACTGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACCCACACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCCCGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTcagc                                                                                                                                                                                                                                                                             >  2:948296/1‑289 (MQ=255)
     gCCACTGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTcagca                                                                                                                                                                                                                                                                            >  2:639722/1‑288 (MQ=255)
       cattGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCCGCGCCTGACCAGACTCCCCCTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTcagca                                                                                                                                                                                                                                                                            <  1:2379433/283‑1 (MQ=255)
          tGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTcagcagca                                                                                                                                                                                                                                                                         >  1:2405663/1‑286 (MQ=255)
            gTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGAGTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTCTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAgctgc                                                                                                                                                                                                                                                                    >  1:1284106/1‑288 (MQ=255)
              tACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAgctgcga                                                                                                                                                                                                                                                                  <  1:799427/289‑4 (MQ=255)
                ccGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAgctgcgagg                                                                                                                                                                                                                                                                <  1:648852/289‑6 (MQ=255)
                  gAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAgctgcgaggag                                                                                                                                                                                                                                                              <  1:1341203/289‑8 (MQ=255)
                      ccAGGCAGCGCATGACGCCACATCGGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCaa                                                                                                                                                                                                                                                          <  1:2100811/289‑1 (MQ=255)
                       cAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGAAAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCaa                                                                                                                                                                                                                                                          <  2:1247452/288‑1 (MQ=255)
                         ggCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAAt                                                                                                                                                                                                                                                       >  1:1168988/1‑289 (MQ=255)
                                 aTGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATaaa                                                                                                                                                                                                                                                <  1:1498973/288‑1 (MQ=255)
                                   gACGCCACCTCTGCAGCACCAACAGACGGGAAAAGATCGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACGGACC‑‑GACCGGCACCGCTTTCAACGGGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAg                                                                                                                                                                                                                                             <  2:687045/289‑1 (MQ=255)
                                           aTCTGCGGCATCACCAGACGGAAAAGGCTAGCCGATCTCG‑ACAGCCCCAGCGCCTGACCATACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGACGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCAccacca                                                                                                                                                                                                                                     <  2:1225049/289‑1 (MQ=255)
                                           aTCTGCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCAccacca                                                                                                                                                                                                                                     >  1:425431/1‑289 (MQ=255)
                                               gCGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAAt                                                                                                                                                                                                                                 <  2:1875751/289‑1 (MQ=255)
                                                cGGCATCACCAGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCCCGAACCCAAGATTGATAGTTAAGCCATCCGAA‑AGCGTCAGCAGCCGCTGCCAGGAGCCAAAATAGATAAACAGcaccacaaacatt                                                                                                                                                                                                                                >  2:917799/1‑282 (MQ=255)
                                                      cACCAGACGGAAAAAGAGAGC‑CGAGTGCGACGGCCCCAGCGCCTGACCAGACTCCCACTAACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGc                                                                                                                                                                                                                          <  2:2557991/289‑1 (MQ=255)
                                                          aGACGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGCCGAAGCTCTCAATGTCCACCTGCACTGGGATCTGCACGAACCCAAGATTCAGAGTGAAGCCATC‑CTACAGCGTCAGCAGCACCTCCACGCAGCCAAAATGAATAAACAGCCccaccaaccattcttgcacc                                                                                                                                                                                                                       >  2:2270902/1‑274 (MQ=255)
                                                            aCGGAAAAAGATAGCCGATTTCG‑ACAGCCCCAGCGCCTGACCAGTCTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGcc                                                                                                                                                                                                                     >  1:324740/1‑288 (MQ=255)
                                                                        tagccgattccgcgaGCACCATCGCCAGCCTAGACTCCCACTGACC‑‑CCCGCGCACCGCTTTCAGCGCGCCACGAAGCTTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTACAGCTGCACTGGGATCTTCACGAACCCAAGATTGATAGTGAAGCCATCCGAG‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAATCAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATg                                                                                                                                                                                                           <  2:1517230/273‑1 (MQ=255)
                                                                            cgctgtccacAGCCGCAGCGCCGGCCCAGAGTCCCCCAGACC‑‑CCCCGGCCCCGCTGTCAACGCGCCCAGAAGCGTTTGCGAGGCATAGGCGGCATACAGCATTGACAGAGCGATGACACCACAAAGGCACGGGCTAACGTCGAAGCTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCATGATTGATAGTGAAGCCATCCGAA‑AGCGTCACCAGCAGCTGCAAGGTGCCAAAATAGATCAACAGCACCACCAGAATTTCTGGCGGGCCACGCAGAATGGTTAc                                                                                                                                                                                                      <  2:1982957/279‑1 (MQ=255)
                                                                                        ccccAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGc                                                                                                                                                                                                                 >  2:2395567/1‑265 (MQ=255)
                                                                                             gcgcCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGccc                                                                                                                                                                                     >  1:826973/1‑288 (MQ=255)
                                                                                                        gACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAgctgcga                                                                                                                                                                                                                                                                  <  1:943763/200‑4 (MQ=255)
                                                                                                        gACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGAc                                                                                                                                                                         >  1:1296161/1‑289 (MQ=255)
                                                                                                                   aCC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              >  1:975349/1‑288 (MQ=255)
                                                                                                                    cc‑‑cACGGGCACCCCTTT‑AACGGGCCCCGAAAGGGTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgccga                                                                                                                                                            <  2:36559/289‑4 (MQ=255)
                                                                                                                    cc‑‑cACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              <  1:1532927/288‑2 (MQ=255)
                                                                                                                    cc‑‑cACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAAGAGATAAACAGCACCACCAGAATTTCCGGAATGCCACGCAGAATGGTTACCAGCTCTGAACCTGCCTCCGCCACAGGCAGCCATTTTgccg                                                                                                                                                             >  2:1472795/1‑287 (MQ=255)
                                                                                                                     acctgccGGAACCGATGTCAACCGGCCCCGAAGCGTTTGGGAGGAATGGGCGGAAAAAAGCGGAGACAGACGGATGAAACCACAAAGGAACGGGCTAAATGCGAATTTCTCAATGTCCAGTTGCACTGGGAGCTGCATGAACCCAAGATTGATAGTGAAGCCTTCCGAG‑AGCGTCAGCAGCATCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCATAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              <  2:1412108/284‑2 (MQ=255)
                                                                                                                         aCCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgccgac                                                                                                                                                           >  1:2684818/1‑284 (MQ=255)
                                                                                                                               aCCGCTTTCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCAt                                                                                                                                                     >  1:2175500/1‑288 (MQ=255)
                                                                                                                                    tgtCAACGCGCCCCGAACGGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCa                                                                                                                                               <  2:1296161/287‑1 (MQ=255)
                                                                                                                                     ttCAACGCGCCCCGAAGCGTTTGCGAGGCATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCaa                                                                                                                                              <  2:1614711/289‑1 (MQ=255)
                                                                                                                                                       gtttgcgaggcAGAGGCGGCAGACAGCAGTGACAGAGGGATGGAGCCACAAAGTAACGGGCGAAAGGCGAAGTTCTCAGTGTCCATCTGCACTGGGATCTGCACGAACCCAAGAGAGATAGTGGAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGGCAAAAAAGTTAAGCAGCACCTCCAGAATTTCTGGCAGGCGACGCATGATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGTCGACTCCCATACCGCAAAGAGCATcgccagcgcga                                                                                                                            <  2:2105076/281‑3 (MQ=255)
                                                                                                                                                         ttgcgaggcATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCa                                                                                                                                                      <  1:1081558/255‑1 (MQ=255)
                                                                                                                                                         ttgcgaggcATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCa                                                                                                                                                      >  2:1081558/7‑261 (MQ=255)
                                                                                                                                                         ttgcgaggcATAGGCGGCATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCgccagcgccagc                                                                                                                          <  1:1485416/283‑1 (MQ=255)
                                                                                                                                                               ggcATAGGCGGCATACAGCGATGGCAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCAGCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGAc                                                                                                                     <  2:1338964/288‑1 (MQ=255)
                                                                                                                                                                         gcATACAGCAGTGACAGAGCGATGAACCCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGTACGCCATTTTGCCGACTCCCATACCGCCAAGACCATCGCCAGCACCAGCCCGACAATTAACGcac                                                                                                          >  1:2370538/1‑289 (MQ=255)
                                                                                                                                                                          cATACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGcaca                                                                                                         >  1:755589/1‑289 (MQ=255)
                                                                                                                                                                           aTACAGCAGTGACAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACaa                                                                                                        >  1:1627894/1‑289 (MQ=255)
                                                                                                                                                                                 cagtgacAGAGCGATCACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCa                                                                                                  >  1:1234596/7‑289 (MQ=255)
                                                                                                                                                                                 aagtgacgcagCGATGCCACCACGAAGCACCGGGATAAGCTGGAACTTCTCAAGCGCAATGTGCACCGGGAGCTGCACGAACCAAGGATGGATGGTGGAGACATCCGAA‑AGCGTCAGCAGGAGCTGCGAGGAGCCAAAATAAATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGACAGGTTACCCGCGCTGCGCCTGCCCACGCGCCCGGAGGCCACTTAGACGACTCCCAGACCGCAAAGAACATCGCCAGCGCCAGCCCGCCAATCAATGGACAAGCGGCa                                                                                                  <  2:380663/280‑1 (MQ=255)
                                                                                                                                                                                  agtgacAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGc                                                                                                   <  1:2023696/282‑1 (MQ=255)
                                                                                                                                                                                    tgacAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              <  2:1951296/223‑2 (MQ=255)
                                                                                                                                                                                       aggagCGATGAAAACACGTAGGAACGGGTTAACGTCGAAGGTATGAATGTCCATCTGGCCTGGGATTTGCACGAACCACAGATGGATAGTGAAGCCATCCGCA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATCAACAGCACCACCAGAATGTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCg                                                                                            <  2:13743/287‑1 (MQ=255)
                                                                                                                                                                                            cGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGAc                                                                                                                     <  2:2625367/259‑1 (MQ=255)
                                                                                                                                                                                            cGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAACCAATGACCAAACGGCAAGGCTGACgg                                                                                        >  2:572567/1‑288 (MQ=255)
                                                                                                                                                                                                    ccacAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAg                                                                                                                                                                                                                                                     >  2:783876/1‑123 (MQ=255)
                                                                                                                                                                                                     cacaAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATAcc                                                                                                                                                  >  1:1696680/1‑221 (MQ=255)
                                                                                                                                                                                                     cacaAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCCAAGAACATCGCCAGCGCCAGCCCGACGATCCATGCACAAACGGCAAGGCCGACGGTCGTCCcgg                                                                               >  2:2247495/1‑288 (MQ=255)
                                                                                                                                                                                                               cGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCCCAAACGGCAAGGCCGACGGTCATCCCGGCGGCCCTCGCt                                                                    >  2:2729326/1‑289 (MQ=255)
                                                                                                                                                                                                               cGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGcc                                                                                             >  1:379746/1‑264 (MQ=255)
                                                                                                                                                                                                               cGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACACCGCCAGCGCCAGCCCGACACTCAATGCACACACGGCAAGCACGACGCTCACACCgacggccactgca                                                                    >  2:431344/1‑282 (MQ=255)
                                                                                                                                                                                                                            aaGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAgcg                                                                                                                                                                                                 <  1:604105/151‑1 (MQ=255)
                                                                                                                                                                                                                            aaGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAat                                                        >  1:456191/1‑288 (MQ=255)
                                                                                                                                                                                                                            aaGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAat                                                        >  1:1855805/1‑288 (MQ=255)
                                                                                                                                                                                                                            aaGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGCCGCTTGCCAAAGGAAAAAat                                                        >  2:488129/1‑288 (MQ=255)
                                                                                                                                                                                                                                    aaTGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGTCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATcgccagcgcca                                                                                                                            >  2:1660161/1‑212 (MQ=255)
                                                                                                                                                                                                                                       gTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              <  1:1748084/175‑2 (MQ=255)
                                                                                                                                                                                                                                       gTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              >  2:1748084/1‑174 (MQ=255)
                                                                                                                                                                                                                                          cATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCa                                                                                                                                                      >  2:1398730/1‑180 (MQ=255)
                                                                                                                                                                                                                                          cATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAAt                                         <  1:87497/289‑1 (MQ=255)
                                                                                                                                                                                                                                            tCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGTCTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCCCTTGCTAAAGGAAAAAATTCAATCCACAGGAAtt                                        >  2:310514/1‑288 (MQ=255)
                                                                                                                                                                                                                                            tCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACACACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAAtt                                        >  1:1401272/1‑288 (MQ=255)
                                                                                                                                                                                                                                             cTGCACTGGGATCTGCACGAACCCAGGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTAc                                      <  2:1550824/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    gggATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGa                               <  2:826973/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATtcatc                                               <  1:1441785/272‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGa                               >  2:893152/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     ggATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGa                               <  2:2047866/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGa                               >  2:242967/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      gATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGaa                              <  1:1585178/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      gATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGaa                              <  1:2299388/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      gATCTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGaa                              <  1:2052109/288‑1 (MQ=255)
                                                                                                                                                                                                                                                         cTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACACTCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAt                          <  1:2444126/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         cTGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAt                          <  1:2232387/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              >  1:2599973/1‑155 (MQ=255)
                                                                                                                                                                                                                                                          tGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTgg                                <  1:1117759/282‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTgg                                >  2:1117759/1‑282 (MQ=255)
                                                                                                                                                                                                                                                          tGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAtt                         >  1:1946907/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          tGCACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACGCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCATAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCGTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGGACCAtt                         >  2:1033768/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cACGAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCCAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATttg                       >  1:987394/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               gAACCCAAGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTgcc                                                                                                                                                              <  1:1052639/151‑2 (MQ=255)
                                                                                                                                                                                                                                                                  cccAAGATGGATAGTGAAGCCATCCGAA‑AGCGTCAGCAACAGCTGCGAGGAGCAAAAATAGATAAACCGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAg                 <  1:2504464/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGAc                                                                                                                                                                         <  1:1933084/133‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aGATTGATAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGAc                                                                                                                                                                         >  2:1933084/1‑133 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACACTCAATGCACAAACGGCCAGGCCGACGGTCATCCCGGCCGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTGCTGGAACCATTTGTTGGAGATGGTTTCGt       >  2:85659/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAAtt                                        >  1:1788458/1‑256 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAAtt                                        <  2:1788458/256‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAt                          >  2:2134356/1‑270 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAt                          <  1:2134356/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCAAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGt       >  1:1088867/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             tAGTGAAGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGt       <  2:2501148/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  aaGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCAt                          <  1:1959559/264‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  aaGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGTAAGTg  >  2:2326466/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                  aaGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGTAAGTg  >  1:2311145/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                   aGCCATCCGAA‑AGCGTCAGCAGCAGCTGCGAGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCTGAACCTGCCCACGCGACAGGACGCCATTTTGCCGACTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCa                                                                                                  <  2:1825505/191‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
CACCAGCCACTGGTTACCGAGGCCAGGCAGCGCATGACGCCACATCTGCGGCATCACCAGACGGAAAAAGATAGCGCTTTTGC‑TCAGCCCCAGCGCCTGACCAGACTCCCACTGACC‑‑CACCGGCACCGCTTTCAACGCGCCCCGAAGCGTTTGGCTGGCATAGGCGGCATACAGCAGACTCAGAGCGATGACACCACAAAGGAACGGGCTAACGTCGAAGTTCTCAATGTCCATCTGCACTGGGATCTGCACGAACCCAAGATTGATAGTGAAGCCATCGCTA‑AGCGTCAGCAGCAGCTGGCTGGAGCCAAAATAGATAAACAGCACCACCAGAATTTCTGGCAGGCCACGCAGAATGGTTACCAGCGCACTACCTGCCCACGCGACAGGACGCCATTTTGCGCTCTCCCATACCGCAAAGAACATCGCCAGCGCCAGCCCGACAATCAATGCACAAACGGCAAGGCCGACGGTCATCCCGGCGGCGCTTGCTAAAGGAAAAAATTCATTCATCAGGAATTACTTCTGGAACCATTTGTTGTAGATGGTTTCGTAAGTG  >  CP042583/764632‑765190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A