Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,792,001 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,792,0010GC99.3% 642.2 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (147/124);  total (147/126)
Fisher's exact test for biased strand distribution p-value = 2.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP0425831,792,0020CG98.5% 623.0 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base G (144/123);  total (147/126)
Fisher's exact test for biased strand distribution p-value = 6.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,792,0030TA98.5% 641.1 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (145/124);  minor base C (2/2);  total (147/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 273 total aligned reads displayed.

TCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTACTCTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGGCTCCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGGCTGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCAGCACGCTAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTAACGGCTTTTTGT  >  CP042583/1791729‑1792280
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                     
tcatcaATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAAtt                                                                                                                                                                                                                                                                         >  1:510508/1‑289 (MQ=255)
tcatcaATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAAtt                                                                                                                                                                                                                                                                         >  1:1477646/1‑289 (MQ=255)
     aaTAGCATGAGTGACCGGCACAAGGGTACGCCACAGCAAAGGGTGAATGCGCGTCATCTCTTGTTGCAACGGGCTGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGc                                                                                                                                                                                                                                                                    <  2:1367741/289‑1 (MQ=255)
         tCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATCCGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACgg                                                                                                                                                                                                                                                                >  1:346045/1‑289 (MQ=255)
            tGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCTGCGCCCGCGACCATTTTTGTACTTGCGGCACGGTa                                                                                                                                                                                                                                                              >  1:1997925/1‑288 (MQ=255)
            tGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTa                                                                                                                                                                                                                                                              >  1:1004674/1‑288 (MQ=255)
             gAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGc                                                                                                                                                                                                                                                            >  1:1691062/1‑289 (MQ=255)
              aGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTACTTCGTCGATACGAACGTCAACCCCCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGc                                                                                                                                                                                                                                                            >  2:1165343/1‑288 (MQ=255)
                      cagcacgggTCCGCCCCAGCAAACGGTGAAGGCGCGTCCTCTCTTGTTGCCACGCGCCGGCCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTg                                                                                                                                                                                                                                                   <  2:1450215/282‑1 (MQ=255)
                        acaACGGCACGCCCCAGCAAACGGGTAATGCGCGTCATCGCTTGTTGCACCGCGCCCGGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTgcg                                                                                                                                                                                                                                                 <  2:1804353/289‑1 (MQ=255)
                         caACGGTACGCCCCAGGAACCGGGGAATGGGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGCCTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTgcgc                                                                                                                                                                                                                                                <  2:252542/289‑1 (MQ=255)
                          aaTGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGcc                                                                                                                                                                                                                                               <  2:2345694/289‑1 (MQ=255)
                            tGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTGGCGATGTTTTGCGCCa                                                                                                                                                                                                                                              >  1:1295179/1‑288 (MQ=255)
                            tGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCAc                                                                                                                                                                                                                                             >  1:105835/1‑289 (MQ=255)
                                 cGCCCCAGCAACCGGGGAAGTCGCGTCATCGCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTGAATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACGCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTGTTGCGCCACGCTcc                                                                                                                                                                                                                                        <  2:2391997/289‑1 (MQ=255)
                                 cGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTg                                                                                                                                                                                                                                                   <  1:203159/278‑1 (MQ=255)
                                    ccccgcgactgttGAATGCGCGTCTTCTGTTGTTGCACGCCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCAACCATTCGTAAGCCTTGGGGATCGGCAGCCAGTGCACGGGCCACTCCCACACGTGGCTGCTGGCCACCGGAAAGCTTATGCGTATAACGCTCACGCCAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGTTACGATCGTCAATCCGCGCCGGCGACCACTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGt                                                                                                                                                                                                                                     <  2:2124025/277‑1 (MQ=255)
                                    cccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGt                                                                                                                                                                                                                                     >  1:658906/1‑289 (MQ=255)
                                      cAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTgg                                                                                                                                                                                                                                   >  1:1583889/1‑289 (MQ=255)
                                           aacggggcagcgacgTCATCTCTTGTTGCAACGGGCCGCCCGTTACCGGGTCCAGTGCGCCAACAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGaa                                                                                                                                                                                                                              <  2:658906/276‑1 (MQ=255)
                                             cGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTCGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACa                                                                                                                                                                                                                            <  1:1165343/289‑1 (MQ=255)
                                              ggTGGACGCGAGTCATTCCTTGTTGCAACTCGCCGCCCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCTTCAGTAGGACTTGCGGATCGGCATCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGAGGCGGATAACGCTCACGCAAATTTGCCTCCAGACCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCTACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACa                                                                                                                                                                                                                            <  2:540297/288‑1 (MQ=255)
                                              ggTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTGAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAg                                                                                                                                                                                                                           >  1:734685/1‑289 (MQ=255)
                                              ggTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCCCCAGTGGGGGAACAg                                                                                                                                                                                                                           >  1:2284976/1‑289 (MQ=255)
                                                tGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGTATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGCCCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGGCTCGCCCCAGTGGGGGAACAgg                                                                                                                                                                                                                          >  1:1357340/1‑288 (MQ=255)
                                                    tggcggTCATCTCTTGTTGCAACGGGCCGCGCGTAACCGGTTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAAt                                                                                                                                                                                                                     <  2:1583889/284‑1 (MQ=255)
                                                    tGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAAt                                                                                                                                                                                                                     <  1:2380303/289‑1 (MQ=255)
                                                        cgTCATCTCTTGTTGCAACGCGCCGCGCGGTACCGGGTCCAGTGCGCCAAAAGGTTCATACATTAGTACGCCTTGCGGATCGGCAGCCAGTGCACGCCACACTCCCACAGTTTGCTGCTGACCACCGGTAAGCTGATGCGGATACCGCTCACGTCATTTTCACTCCAGCCCCAGTCGACCAATTAATTTGTCGATACGATCGTAAATCCGCGCCCGCGACCATTTTTGTAATTTCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGAt                                                                                                                                                                                                                 >  2:1727323/1‑289 (MQ=255)
                                                           cATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              <  1:784064/289‑1 (MQ=255)
                                                           cATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              <  1:614631/289‑1 (MQ=255)
                                                           cATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              <  2:1004674/289‑1 (MQ=255)
                                                            acctcgTGTTGCAACGCGCCGGGCGTGACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTGAGACGTGCGGATCGGCAGCCCGTGCACGCGCCACTCCTACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTGGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGaa                                                                                                                                                                                                             <  2:1938510/287‑1 (MQ=255)
                                                            aTCGCTTGTTGCAACGGGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCCTCCATTAGTAAGACTTGCGGGTCGGCAGCCAGTTAACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGaa                                                                                                                                                                                                             <  2:1987584/289‑1 (MQ=255)
                                                                   gttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATa                                                                                                                                                                                                      <  1:1891375/289‑1 (MQ=255)
                                                                       cAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATa                                                                                                                                                                                                      >  2:2040293/1‑285 (MQ=255)
                                                                                   cgTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGgcgc                                                                                                                                                                                      <  1:1256433/289‑1 (MQ=255)
                                                                                    gtaaCCGGGTCAATGGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGAACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGgcgc                                                                                                                                                                                      <  2:249531/285‑1 (MQ=255)
                                                                                    gTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGgcgc                                                                                                                                                                                      <  2:1058499/288‑1 (MQ=255)
                                                                                         cGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGACAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGAGGCACGGTACGGATGTTGTGCGCCACGCTCCAGTGGGGGAACAGGCCAGTAGATTGAATGGCATAGCCCACCCGGCGGCGCAGCTcc                                                                                                                                                                                >  2:625890/1‑289 (MQ=255)
                                                                                          gggTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCa                                                                                                                                                                               <  1:2040845/289‑1 (MQ=255)
                                                                                           ggTCCAGTGCGCCATAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCa                                                                                                                                                                                                                                              <  2:2208769/225‑1 (MQ=255)
                                                                                           ggTCCAGTGCGCCATAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCa                                                                                                                                                                                                                                              >  1:2208769/1‑225 (MQ=255)
                                                                                             tCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTACTTCGTCGATACGATCGTCAATCCGCGCCCGCGCCCATTTTTGTAATTCTGGAACGGTAGCGATGTTTTGCGGCACGCTCCCGTGGGGGAACCGGCCAATAGACTGACTGGCATAGCCCATCCGGCGGAGACACTCCAGt                                                                                                                                                                             >  2:686259/1‑288 (MQ=255)
                                                                                                aGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCa                                                                                                                                                                                                                                              <  1:2567518/220‑1 (MQ=255)
                                                                                                  tGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGc                                                                                                                                                                       >  1:811632/1‑289 (MQ=255)
                                                                                                  tGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGAGAACGCTCACGCAACTTTGCCTCCAGCCCCAGTATCGCCATTAATTCGTCGATACGATCGTCAATACGCGCCCGCGACCATTTTTGTAATTGCGGCTCGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGCAACAGGCCACAAGCTTGAGTGGCAGACGCCATCCGGCGGCGCACCTcaacttctca                                                                                                                                                                        >  2:2675568/1‑279 (MQ=255)
                                                                                                          aaGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCGAATAGATTGa                                                                                                                                                                                                              <  1:427168/242‑1 (MQ=255)
                                                                                                            ggTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCa                                                                                                                                                                                                                       >  1:1724008/1‑231 (MQ=255)
                                                                                                                 aTCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCa                                                                                                                                                                                                                                                                   >  1:1754951/1‑182 (MQ=255)
                                                                                                                 aTCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCa                                                                                                                                                                                                                                                                   <  2:1754951/182‑1 (MQ=255)
                                                                                                                       tAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCAc                                                                                                                                                                                                                                             >  1:2596484/1‑198 (MQ=255)
                                                                                                                       tAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCAc                                                                                                                                                                                                                                             <  2:2596484/198‑1 (MQ=255)
                                                                                                                        aGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCgg                                                                                                                                                 <  2:763187/289‑1 (MQ=255)
                                                                                                                        aGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCAAACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCgg                                                                                                                                                 <  1:1038157/289‑1 (MQ=255)
                                                                                                                           aaGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCa                                                                                                                                               <  1:2442361/288‑1 (MQ=255)
                                                                                                                            aGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGgcggcg                                                                                                                                                                                       >  1:373565/1‑247 (MQ=255)
                                                                                                                            aGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGgcggcg                                                                                                                                                                                       <  2:373565/247‑1 (MQ=255)
                                                                                                                               cTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCg                                                                                                                                          <  2:486824/289‑1 (MQ=255)
                                                                                                                                 tGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTcc                                                                                                                                                                                                                                        <  2:2277648/193‑1 (MQ=255)
                                                                                                                                  gCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATCCGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAAACGATTGAATGACATAGCCCATCCGGCGGCGCAACGCCAGTCCTGGCAGCGCACGGATTTTTTCTCCGGCACAGCgtg                                                                                                                                        >  2:2454162/1‑286 (MQ=255)
                                                                                                                                   cGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATttcttc                                                                                                                                                      >  1:496688/1‑273 (MQ=255)
                                                                                                                                         ggCAGCCAGTGCACGCGCCACTCCCACCCGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCg                                                                                                                                <  1:2463143/289‑1 (MQ=255)
                                                                                                                                          gCACCCAGGGCACGCGCCACTCCCAAACGTGGCTGCGGACAACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCg                                                                                                                                <  2:1361607/288‑1 (MQ=255)
                                                                                                                                                aGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGGGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCAt                                                                                                                         >  2:318130/1‑289 (MQ=255)
                                                                                                                                                  tGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              >  2:123415/1‑202 (MQ=255)
                                                                                                                                                  tGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCAt                                                                                                                         >  1:2348633/1‑287 (MQ=255)
                                                                                                                                                   gCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATg                                                                                                                        <  1:1284066/287‑1 (MQ=255)
                                                                                                                                                    cACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAgcgag                                                                                                                                                                 <  2:1318953/245‑5 (MQ=255)
                                                                                                                                                        cgcCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGgcgc                                                                                                                                                                                      <  1:2168383/220‑1 (MQ=255)
                                                                                                                                                        cgcCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTCTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACCGGCCAATAGACTGAATGGCATAGCCCACCCGGCGGCGCAACGCCAGTACTGGCAGCGAGCGAATTTCTTCCCCCGCAAAGCGAATCCCTCCGCTGTCATGCCccac                                                                                                                  >  2:2706351/1‑288 (MQ=255)
                                                                                                                                                        cgcCACCCCCACACGTGTCTGCGAACCCCCGAGAAGCTGAGGCGGATAACGCTCACGCAAATTGGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTGGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTccacc                                                                                                                 <  2:1295179/289‑1 (MQ=255)
                                                                                                                                                           cacggccACACGTCGCTGCAGACACCCGGAAAGCTGAGGCGGATAACGCTAACGCAAATTTGACACCAGCCCCAGTAGAGCCAGTAATTCGTCGATAGGATCGTCAATCCGCGCCCGGGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTGTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAg                                                                                                               <  2:876416/283‑1 (MQ=255)
                                                                                                                                                                ccACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGtt                                                                                                         >  2:2193082/1‑289 (MQ=255)
                                                                                                                                                                   cacGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGGGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTTGCATGCCCCACCCGGCGGTTaa                                                                                                       >  2:1097804/1‑288 (MQ=255)
                                                                                                                                                                   cacGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTaa                                                                                                       >  1:532106/1‑288 (MQ=255)
                                                                                                                                                                     cGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCACCTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGTATCTCTCCGCTGGCATGCGCCACCAGGCGGTTAATCa                                                                                                    >  2:584465/1‑289 (MQ=255)
                                                                                                                                                                       ttGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCCGTACTGGCCGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCCCCCCGCTGTCATTCCCCACCAGGCGGTTaaccctt                                                                                                  >  2:2471465/1‑284 (MQ=255)
                                                                                                                                                                       ttGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAgcgag                                                                                                                                                                 >  2:2658452/1‑222 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCa                                                                                                                                                                                                                       <  1:1136336/171‑1 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAgg                                                                                                              >  2:1556734/1‑276 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCAttt                                                                                                 >  1:142959/1‑289 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCAttt                                                                                                 >  1:287205/1‑289 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCAttt                                                                                                 >  1:2078211/1‑289 (MQ=255)
                                                                                                                                                                        tgctgcTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCAttt                                                                                                 >  1:1952086/1‑289 (MQ=255)
                                                                                                                                                                                  caccGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCgg                                                                                                                                                 >  2:178078/1‑231 (MQ=255)
                                                                                                                                                                                  caccGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATc                                                                                                     >  1:448337/1‑275 (MQ=255)
                                                                                                                                                                                  caccGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGggtggt                                                                                       >  2:455376/1‑289 (MQ=255)
                                                                                                                                                                                       gAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              >  2:94528/1‑165 (MQ=255)
                                                                                                                                                                                       gAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGa                                                                                                                                                                                                              <  1:94528/165‑1 (MQ=255)
                                                                                                                                                                                          aGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGc                                                                               <  2:1896616/289‑1 (MQ=255)
                                                                                                                                                                                            cTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCg                                                                             >  1:19026/1‑289 (MQ=255)
                                                                                                                                                                                               aTGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGc                                                                                                                                                                                                    <  1:2682089/167‑1 (MQ=255)
                                                                                                                                                                                                tGCGGTGAACGCATACGAAAATTTGACTCCAGGCCCAGTAGAGCCATTAATTCGGCGATACGATCGTTAATCCGCGTCCGCTACCATTTTTGTAATTGCGGCACGGTAGCGCTGTTTTGCGCCACGCTCCAGTGGGGAAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAg                                                                          <  2:2348633/288‑1 (MQ=255)
                                                                                                                                                                                                         cGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAACGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTTAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCGTCTCCGGCACAGCGGATCCCTACGCTGTCATGCTCCACCAGGCGGTTAAGCCTTTTCAGGGTGGTTGAGTTCCCGTAGCCAGAtgga                                                                 >  2:1142717/1‑286 (MQ=255)
                                                                                                                                                                                                             cACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAAt                                                            <  1:1553376/289‑1 (MQ=255)
                                                                                                                                                                                                                                ccccAGTAGCGCCATTAATTCGTCGATAAGATCGTCAATCCGCGTCCGCGACCATTTTTGTATTTCCGGCACGGTAGCATTGTTTTGCGCCACGCTCCAGTGGGGGTACAGCACAATAGCTTGAATCACATAGCCCATCCGGCGGCGCTACCCCAGTACTGGCAGCGAGCGAATGTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTCCAGGGTGGTGGATTTGCCGGAGCCCGATCTGCCAATCAGCACAGAAAAACTCCCt                                         >  2:2016486/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           aCGATCGTCAATCCGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCAGCACCGAAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTa              <  1:1066058/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCGATCGTCAATCCGAGCCCGCGACCATTTTTGTAATTGCGGCACGGTGGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCATCACCGAAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTa              <  1:2411501/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aTCCCCGCCCGCGACCATTTTGGTAATTGCGGAACGGTAGGGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCAGCACCGAAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTAACGGCttttt    <  2:1044951/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccGCGCCCGCGACCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGCGAGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCAGCACCGAAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTAACGGCTTTTtgt  <  1:1801510/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                     
TCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTACTCTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGATCGTCAATCCGCGCCCGGCTCCATTTTTGTAATTGCGGCACGGTAGCGATGTTTTGCGCCACGCTCCAGTGGGGGAACAGGCCAATAGATTGAATGGCATAGCCCATCCGGCGGCGCAACTCCAGTACTGGCAGGCTGCGAATTTCTTCTCCGGCAAAGCGGATCTCTCCGCTGTCATGCTCCACCAGGCGGTTAATCATTTTCAGGGTGGTGGATTTGCCGGAGCCAGATGTGCCAATCAGCACGCTAAAACTCCCTTCCTGAAAATTGAGATTGAGATCGTTAACGGCTTTTTGT  >  CP042583/1791729‑1792280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A